Contig 006995:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002G08+                     CGNGGCGGGGCTGCAGGGAATAGTGGAGCCNCCGTGGGTGAAGTATTGC
                      ____________________________________________________________
consensus                        CGNGGCGGGGCTGCAGGGAATAGTGGAGCCNCCGTGGGTGAAGTATTGC
 
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rJMSF002G08+          AGGGAGTGGGGGCCTAAGATTACGTATATAAGTGAGGAGGATATCAAGAGAGTGGAGAGC
                      ____________________________________________________________
consensus             AGGGAGTGGGGGCCTAAGATTACGTATATAAGTGAGGAGGATATCAAGAGAGTGGAGAGC
 
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rJMSF002G08+          TTATTGCCGGTGGAATGGAGAGGTGTATTTGAGACATTGATTCATCTTTTACCAAATGAG
                      ____________________________________________________________
consensus             TTATTGCCGGTGGAATGGAGAGGTGTATTTGAGACATTGATTCATCTTTTACCAAATGAG
 
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rJMSF002G08+          TTTTTTGGGGAAGAAGGGCCTACTGGTCCCAATATGAAAGCTAGTTGGAGTGGGGATGAG
rJMFF049L13+                                    TCCCAATATGAAAGCTAGTTGGAGTGGGGATGAG
                      ____________________________________________________________
consensus             TTTTTTGGGGAAGAAGGGCCTACTGGTCCCAATATGAAAGCTAGTTGGAGTGGGGATGAG
 
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rJMSF002G08+          AAGTAAGGAAAATGGAAGTGGCNTTAGTGAAGTGAAAGAAAAGAAAATGACCAAAAAAAA
rJMFF049L13+          AAGTAAGGAAAATGGAAGTGGCATTAGTGAAGTGAAAGAAAAGAAAATGACCAAAAAAAA
                      ____________________________________________________________
consensus             AAGTAAGGAAAATGGAAGTGGCATTAGTGAAGTGAAAGAAAAGAAAATGACCAAAAAAAA
 
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rJMSF002G08+          ATATGTGGCTCACTTTTTCTGGTTTGGATTATGGAGTGTGCTATATAAGTTAAGATAATA
rJMFF049L13+          ATATGTGGCTCACTTTTTCTGGTTTGGATTATGGAGTGTGCTATATAAGTTAAGATAATA
                      ____________________________________________________________
consensus             ATATGTGGCTCACTTTTTCTGGTTTGGATTATGGAGTGTGCTATATAAGTTAAGATAATA
 
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rJMSF002G08+          ATTAAATAAATGGGATTGAAGTAAGAGCATCTATAATAGTAGAGATATTTTGTGATTTGT
rJMFF049L13+          ATTAAATAAATGGGATTGAAGTAAGAGCATCTATAATAGTAGAGATATTTTGTGATTTGT
                      ____________________________________________________________
consensus             ATTAAATAAATGGGATTGAAGTAAGAGCATCTATAATAGTAGAGATATTTTGTGATTTGT
 
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rJMSF002G08+          GAGGAGATTTATTTTGTAAGTGTGATTAGGAAAGAGAATAAGGGAGGAGAGAAAAATAAA
rJMFF049L13+          GAGGAGATTTATTTTGTAAGTGTGATTAGGAAAGAGAATAAGGGAGGAGAGAAAAATAAA
                      ____________________________________________________________
consensus             GAGGAGATTTATTTTGTAAGTGTGATTAGGAAAGAGAATAAGGGAGGAGAGAAAAATAAA
 
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rJMSF002G08+          AATAAAATAAAATAAGCAAAATTTATTTTAAAATAAAAATAAAAATAAAGGGACTGTCTG
rJMFF049L13+          AATAAAATAAAATAAGCAAAATTTATTTTAAAATAAAAATAAAAATAAAGGGACTGTCTG
                      ____________________________________________________________
consensus             AATAAAATAAAATAAGCAAAATTTATTTTAAAATAAAAATAAAAATAAAGGGACTGTCTG
 
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rJMSF002G08+          ACGAGGCTGACACGCGTGTGGCTTCTGCTGTGCAGCCCAAGCTCCTCTAATATTTCTCTT
rJMFF049L13+          ACGAGGCTGACACGCGTGTGGCTTCTGCTGTGCAGCCCAAGCTCCTCTAATATTTCTCTT
                      ____________________________________________________________
consensus             ACGAGGCTGACACGCGTGTGGCTTCTGCTGTGCAGCCCAAGCTCCTCTAATATTTCTCTT
 
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rJMSF002G08+          TCCTTGGGAAGAGAAATATCTCAAAGCTTGCCGGAAGAGCGGCTCCTTTCTCTCTCTCTT
rJMFF049L13+          TCCTTGGGAAGAGAAATATCTCAAAGCTTGCCGGAAGAGCGGCTCCTTTCTCTCTCTCTT
                      ____________________________________________________________
consensus             TCCTTGGGAAGAGAAATATCTCAAAGCTTGCCGGAAGAGCGGCTCCTTTCTCTCTCTCTT
 
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rJMSF002G08+          GCCTCTCTCTCCTCCATGTAAATAAGCAAACCTCAAAAACCATGAATAAACTCTCAATAA
rJMFF049L13+          GCCTCTCTCTCCTCCATGTAAATAAGCAAACCTCAAAAACCATGAATAAACTCTCAATAA
                      ____________________________________________________________
consensus             GCCTCTCTCTCCTCCATGTAAATAAGCAAACCTCAAAAACCATGAATAAACTCTCAATAA
 
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rJMSF002G08+          TCCTCTGATACTGATGCTCTTAGTAGTAGTGTACTTGCTCTT                  
rJMFF049L13+          TCCTCTGATACTGATGCTCTTAGTAGTAGTGTACTTGCTCTTATAATTATTATTAATAAA
                      ____________________________________________________________
consensus             TCCTCTGATACTGATGCTCTTAGTAGTAGTGTACTTGCTCTTATAATTATTATTAATAAA
 
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rJMFF049L13+          ATAAATAAAAGTGAGTAGTTGTGTAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             ATAAATAAAAGTGAGTAGTTGTGTAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGT