clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF034A17 | Sequence | 507 | 002115 (5) | ref|XP_011081744.1| | 1e-32 | PREDICTED: receptor-like protein kinase 5 [Sesamum indicum] | 747 | 006994 (5) | ref|XP_006364729.1| | 3e-82 | PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum] |
JMFF034L24 | Sequence | 605 | 002115 (5) | ref|XP_011081744.1| | 4e-50 | PREDICTED: receptor-like protein kinase 5 [Sesamum indicum] | 742 | 006994 (5) | ref|XP_006364729.1| | 1e-76 | PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum] |
JMFF049H07 | Sequence | 642 | 002115 (5) | ref|XP_011081744.1| | 1e-53 | PREDICTED: receptor-like protein kinase 5 [Sesamum indicum] | 641 | 006994 (5) | ref|XP_009600836.1| | 3e-56 | PREDICTED: receptor-like protein kinase 5 [Nicotiana tomentosiformis] |
JMSF009D03 | Sequence | 300 | 002115 (5) | ref|XP_011081744.1| | 3e-05 | PREDICTED: receptor-like protein kinase 5 [Sesamum indicum] | 791 | 006994 (5) | ref|XP_006364729.1| | 4e-104 | PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum] |
JMSF029A13 | Sequence | 596 | 002115 (5) | ref|XP_011081744.1| | 1e-46 | PREDICTED: receptor-like protein kinase 5 [Sesamum indicum] | 722 | 006994 (5) | ref|XP_006364729.1| | 3e-97 | PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF009D03+ ATAAGGCATGAACAAAAGCAAGGGCAGGGATTACTGGAGAAACAGTTCCTAGCAGAGGTT
rJMFF034L24+ TAGCAGAGGTT
____________________________________________________________
consensus ATAAGGCATGAACAAAAGCAAGGGCAGGGATTACTGGAGAAACAGTTCCTAGCAGAGGTT
. : . : . : . : . : . :
rJMSF009D03+ AAGATCCTCGGGGGAATTTGG-CACAACAACATAGTGAAATTGTTATGTTGCATCAGAGG
rJMSF029A13+ CACAACAACATAGTGAAATTGTTATGTTGCATCAGAGG
rJMFF034L24+ AAGATCNTCGGGGGAATTTGGCCACANCAACATAGTGAAATTGTTATGTTGCATCAGAGG
____________________________________________________________
consensus AAGATCCTCGGGGGAATTTGGCCACAACAACATAGTGAAATTGTTATGTTGCATCAGAGG
. : . : . : . : . : . :
rJMSF009D03+ AAAGACAACAAAGCTTGTTGTGTATGAATACATGGACAAACAATGCCTTCATAAATGGTT
rJMSF029A13+ AAAGACAACAAAGCTTGTTGTGTATGAATACATGGACAAACAATGCCTTCATAAATGGTT
rJMFF034L24+ AAAGACAACAAAGCTTGTTGTGTATGAATACATGGACAAACAATGCCTTCATAAATGGTT
rJMFF034A17+ TTCATAAATGGTT
____________________________________________________________
consensus AAAGACAACAAAGCTTGTTGTGTATGAATACATGGACAAACAATGCCTTCATAAATGGTT
. : . : . : . : . : . :
rJMSF009D03+ GCATGGAAAGAAGAGGGGCTTAACTACTCAAATCTTGCAGTGGGAGAGGAGGCTAAGAAT
rJMSF029A13+ GCATGGAAAGAAGAGGGGCTTAACTACTCAAATCTTGCAGTGGGAGAGGAGGCTAAGAAT
rJMFF034L24+ GCATGGAAAGAAGAGGGGCTTAACTACTCAAATCTTGCAGTGGGAGAGGAGGCTAAGAAT
rJMFF034A17+ GCATGGAAAGAAGAGGGGCTTAACTACTCAAATCTTGCAGTGGGAGAGGAGGCTAAGAAT
____________________________________________________________
consensus GCATGGAAAGAAGAGGGGCTTAACTACTCAAATCTTGCAGTGGGAGAGGAGGCTAAGAAT
. : . : . : . : . : . :
rJMSF009D03+ TGCCATTGGAGCTTCACAAGGGCTTTGCTATATGCATCACAGTTGCAATCCACCCATTAT
rJMSF029A13+ TGCCATTGGAGCTTCACAAGGGCTTTGCTATATGCATCACAGTTGCAATCCACCCATTAT
rJMFF034L24+ TGCCATTGGAGCTTCACAAGGGCTTTGCTATATGCATCACAGTTGCAATCCACCCATTAT
rJMFF034A17+ TGCCATTGGAGCTTCACAAGGGCTTTGCTATATGCATCACAGTTGCAATCCACCCATTAT
____________________________________________________________
consensus TGCCATTGGAGCTTCACAAGGGCTTTGCTATATGCATCACAGTTGCAATCCACCCATTAT
. : . : . : . : . : . :
rJMSF009D03+ TCATAGAGATATCAAGTCTAGTAACATACTCGTTGACTCTGACTTCAATGCGAAGATTGC
rJMSF029A13+ TCATAGAGATATCAAGTCTAGTAACATACTCGTTGACTCTGACTTCAATGCGAAGATTGC
rJMFF034L24+ TCATAGAGATATCAAGTCTAGTAACATACTCGTTGACTCTGACTTCAATGGGAAGATTGC
rJMFF034A17+ TCATAGAGATATCAAGTCTAGTAACATACTCGTTGACTCTGACTTCAATGCGAAGATTGC
rJMFF049H07+ TCTGACTTCAATGCGAAGATTGC
____________________________________________________________
consensus TCATAGAGATATCAAGTCTAGTAACATACTCGTTGACTCTGACTTCAATGCGAAGATTGC
. : . : . : . : . : . :
rJMSF009D03+ AGACTTTGGACTGGCAAAGATGATGAAGAGTGAAGGAGATCCAGAAACAGCATCTGCTAT
rJMSF029A13+ AGACTTTGGACTGGCAAAGATGATGAAGAGTGAAGGAGATCCAGAAACAGCATCTGCTAT
rJMFF034L24+ AGACTTTGGACTGGCAAAGATGATGAAGAGTGAAGGAGATCCAGAAACAGCATCTGCTAT
rJMFF034A17+ AGACTTTGGACTGGCAAAGATGATGAAGAGTGAAGGAGATCCAGAAACAGCATCTGCTAT
rJMFF049H07+ AGACTTTGGACTGGCAAAGATGATGAAGAGTGAAGGAGATCCAGAAACAGCATCTGCTAT
____________________________________________________________
consensus AGACTTTGGACTGGCAAAGATGATGAAGAGTGAAGGAGATCCAGAAACAGCATCTGCTAT
. : . : . : . : . : . :
rJMSF009D03+ TGTGGGAACCTTTGGTTACATTGCCCCGGAATACAGCAGTACAAGAAAAGTGGACGCGAA
rJMSF029A13+ TGTGGGAACCTTTGGTTACATTGCCCCGGAATACAGCAGTACAAGAAAAGTGGACGCGAA
rJMFF034L24+ TGTGGGAACCTTTGGTTACATTGCCCCGGAATACAGCAGTACAAGAAAAGTGGACGCGAA
rJMFF034A17+ TGTGGGAACCTTTGGTTACATTGCCCCGGAATACAGCAGTACAAGAAAAGTGGACGCGAA
rJMFF049H07+ TGTGGGAACCTTTGGTTACATTGCCCCGGAATACAGCAGTACAAGAAAAGTGGACGCGAA
____________________________________________________________
consensus TGTGGGAACCTTTGGTTACATTGCCCCGGAATACAGCAGTACAAGAAAAGTGGACGCGAA
. : . : . : . : . : . :
rJMSF009D03+ GAGCGACATCTACAGCTTTGGCGTAGTTCTCTTGGAATTGACAACGGGAAGAGAAGCAGT
rJMSF029A13+ GAGCGACATCTACAGCTTTGGCGTAGTTCTCTTGGAATTGACAACGGGAAGAGAAGCAGT
rJMFF034L24+ GAGCGACATCTACAGCTTTGGCGTAGTTCTCTTGGAATTGACAACGGGAAGAGAAGCAGT
rJMFF034A17+ GAGCGACATCTACAGCTTTGGCGTAGTTCTCTTGGAATTGACAACGGGAAGAGAAGCAGT
rJMFF049H07+ GAGCGACATCTACAGCTTTGGCGTAGTTCTCTTGGAATTGACAACGGGAAGAGAAGCAGT
____________________________________________________________
consensus GAGCGACATCTACAGCTTTGGCGTAGTTCTCTTGGAATTGACAACGGGAAGAGAAGCAGT
. : . : . : . : . : . :
rJMSF009D03+ GACTAGAAATGAGGATATAAACCTGGCACAATGGGCACACAAACACCAAAGAGAAGGGAA
rJMSF029A13+ GACTAGAAATGAGGATATAAACCTGGCACAATGGGCACACAAACACCAAAGAGAAGGGAA
rJMFF034L24+ GACTAGAAATGAGG--ATAAACCTGGCACAATGGGCACACAAACACCAAAGAGAAGGGAA
rJMFF034A17+ GACTAGAAATGAGGATATAAACCTGGCACAATGGGCACACAAACACCAAAGAGAAGGGAA
rJMFF049H07+ GACTAGAAATGAGGATATAAACCTGGCACAATGGGCACACAAACACCAAAGAGAAGGGAA
____________________________________________________________
consensus GACTAGAAATGAGGATATAAACCTGGCACAATGGGCACACAAACACCAAAGAGAAGGGAA
. : . : . : . : . : . :
rJMSF009D03+ CTCGGCTGCAAATGCCCTAGATGAGGAGATCAAGGACCCACGGTATCTGGAGGCAATGAT
rJMSF029A13+ CTCGGCTGCAAATGCCCTAGATGAGGAGATCAAGGACCCACGGTATCTGGAGGCAATGAT
rJMFF034L24+ CTCGGCTGCAAATGCCCTAGATGAGGAGATCAAGGACCCACGGTATCTGGAGGCAATGAT
rJMFF034A17+ CTCGGCTGCAAATGCCCTAGATGAGGAGATCAAGGACCCACGGTATCTGGAGGCAATGAT
rJMFF049H07+ CTCGGCTGCAAATGCCCTAGATGAGGAGATCAAGGACCCACGGTATCTGGAGGCAATGAT
____________________________________________________________
consensus CTCGGCTGCAAATGCCCTAGATGAGGAGATCAAGGACCCACGGTATCTGGAGGCAATGAT
. : . : . : . : . : . :
rJMSF009D03+ CGCTGTTTTCAAATTAGGCCTTGCATGCACTTTGAATTCCCCATCAAGCAGACCGTCCAT
rJMSF029A13+ CGCTGTTTTCAAATTAGGCCTTGCATGCACTTTGAATTCCCCATCAAGCAGACCGTCCAT
rJMFF034L24+ CGCTGTTTTCAAATTAGGCCTTGCATGCACTTTGAATTCCCCATCAAGCAGACCGTCCAT
rJMFF034A17+ CGCTGTTTTCAAATTAGGCCTTGCATGCACTTTGAATTCCCCATCAAGCAGACCGTCCAT
rJMFF049H07+ CGCTGTTTTCAAATTAGGCCTTGCATGCACTTTGAATTCCCCATCAAGCAGACCGTCCAT
____________________________________________________________
consensus CGCTGTTTTCAAATTAGGCCTTGCATGCACTTTGAATTCCCCATCAAGCAGACCGTCCAT
. : . : . : . : . : . :
rJMSF009D03+ GAAAGATATTTCACAGATTCTTCAAAAATACAGCAAAAACAATCATCTGTCTCTAGAGAG
rJMSF029A13+ GAAAGATATTTCACAGATTCTTCAAAAATACAGCAAAAACAATCATCTGTCTCTAGAGAG
rJMFF034L24+ GAAAGATATTTCACAGATTCTTCAAAAATACAGCAAAAACAATCATCTGTCTCTAGAGAG
rJMFF034A17+ GAAAGATATTTCACAGATTCTTCAAAAATACAGCAAAAACAATCATCTGTCTCTAGAGAG
rJMFF049H07+ GAAAGATATTTCACAGATTCTTCAAAAATACAGCAAAAACAATCATCTGTCTCTAGAGAG
____________________________________________________________
consensus GAAAGATATTTCACAGATTCTTCAAAAATACAGCAAAAACAATCATCTGTCTCTAGAGAG
. : . : . : . : . : . :
rJMSF009D03+ CCAATAGACAAT
rJMSF029A13+ CCAATAGACAAT
rJMFF034L24+ CCAATAGACAAT
rJMFF034A17+ CCAATAGACAATATAATATTTCCACTTTACTTTTGAATGGACTTGTCCCATTACAAAATA
rJMFF049H07+ CCAATAGACAATATAATATTTCCACTTTACTTTTGAATGGACTTGTCCCATTACAAAATA
____________________________________________________________
consensus CCAATAGACAATATAATATTTCCACTTTACTTTTGAATGGACTTGTCCCATTACAAAATA
. : . : . : . : . : . :
rJMFF034A17+ TTTTGCAATGGTTTGTTTAATTTAATCATACACAGGAAACAGGCAACTTAAACATTAAAG
rJMFF049H07+ TTTTGCAATGGTTTGTTTAATTTAATCATACACAGGAAACAGGCAACTTAAACATTAAAG
____________________________________________________________
consensus TTTTGCAATGGTTTGTTTAATTTAATCATACACAGGAAACAGGCAACTTAAACATTAAAG
. : . : . : . : . : . :
rJMFF034A17+ AAATTAATGAAGCA
rJMFF049H07+ AAATTAATGAAGCATGTTGACCTGTTCACAGCCAAAAAAAAAAAAAAAAGTCTCCAGGGT
____________________________________________________________
consensus AAATTAATGAAGCATGTTGACCTGTTCACAGCCAAAAAAAAAAAAAAAAGTCTCCAGGGT