| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018H13 | Sequence | 553 | 008810 (8) | ref|XP_008391326.1| | 1e-63 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 765 | 006990 (5) | gb|AHG94611.1| | 2e-71 | beta-galactosidase [Camellia sinensis] |
| JMFF031F22 | Sequence | 488 | 008810 (8) | ref|XP_008391326.1| | 9e-65 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 751 | 006990 (5) | gb|AHG94611.1| | 2e-89 | beta-galactosidase [Camellia sinensis] |
| JMFF033M24 | Sequence | 489 | 008810 (8) | ref|XP_008391326.1| | 2e-58 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 667 | 006990 (5) | gb|AHG94611.1| | 3e-70 | beta-galactosidase [Camellia sinensis] |
| JMFF048P10 | Sequence | 476 | 008810 (8) | ref|XP_008391326.1| | 2e-62 | PREDICTED: beta-galactosidase 1 [Malus domestica] | 394 | 006990 (5) | gb|EYU45851.1| | 2e-18 | hypothetical protein MIMGU_mgv1a002308mg [Erythranthe guttata] |
| JMSF021F22 | Sequence | 617 | 008810 (8) | gb|AIU34464.1| | 3e-100 | putative beta-galactosidase 1 precursor, partial [Taraxacum brevicorniculatum] | 839 | 006990 (5) | gb|AHG94611.1| | 1e-95 | beta-galactosidase [Camellia sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF021F22+ GGACATGAGCNCGATGAGCAANGGCCA
____________________________________________________________
consensus GGACATGAGCNCGATGAGCAANGGCCA
. : . : . : . : . : . :
rJMSF021F22+ AGTATGGATAAACGGTAACAGCATGGACGCCATTGGCCTGGAAACAAAGCGCCCGACGAT
____________________________________________________________
consensus AGTATGGATAAACGGTAACAGCATGGACGCCATTGGCCTGGAAACAAAGCGCCCGACGAT
. : . : . : . : . : . :
rJMSF021F22+ GGCTGCAGTTTCTGCAACTATGCAGGTTGGTTTGACGAGAGAAAGTGCNTAAGCAACTGT
rJMFF031F22+ ATGCAGGTTGGTTTGACGAGAGAAAGTGCTTAAGCAACTGT
rJMFF018H13+ ATGCAGGTTGGTTTGACGAGAGAAAGTGCCTAAGCAACTGT
____________________________________________________________
consensus GGCTGCAGTTTCTGCAACTATGCAGGTTGGTTTGACGAGAGAAAGTGCTTAAGCAACTGT
. : . : . : . : . : . :
rJMSF021F22+ GGAGAGGCTTCACAGAGATGGTACCATGTT-CCCCGGTCCTGGCTACGCCCAACGGGCAA
rJMFF033M24+ TGGCTACGCCCAACGGGCAA
rJMFF031F22+ GGAGAGGCTTCACAGAGATGGTACCATGTT-CCCCGGTCCTGGCTACGCCCAACGGGCAA
rJMFF018H13+ GGAGAGGCTTCACAGAGATGGTACCATGTTCCCCCGGTCCTGGCTACGCCCAACGGGCAA
____________________________________________________________
consensus GGAGAGGCTTCACAGAGATGGTACCATGTT-CCCCGGTCCTGGCTACGCCCAACGGGCAA
. : . : . : . : . : . :
rJMSF021F22+ TCTGCTCGTGATTTTCGAGGAATGGGGAGGAAATCCCTATGGAATCTCGTTGCTAAAACG
rJMFF033M24+ TCTGCTCGTGATTTTCGAGGAATGGGGAGGAAATCCCTATGGAATCTCGTTGCTAAAACG
rJMFF031F22+ TCTGCTCGTGATTTTCGAGGAATGGGGAGGAAATCCCTATGGAATCTCGTTGCTAAAACG
rJMFF018H13+ TNTGCTCGTGATTTTCGAGGAATGGGGAGGAAATCCCTATGGAATCTCGTTGCTAAAACG
____________________________________________________________
consensus TCTGCTCGTGATTTTCGAGGAATGGGGAGGAAATCCCTATGGAATCTCGTTGCTAAAACG
. : . : . : . : . : . :
rJMSF021F22+ AGAAATAGCGAGTGTGTGTGCACAGATGTTTGAATGGCAGCCCCAGTTGATGAACTGGGA
rJMFF033M24+ AGAAATAGCGAGTGTGTGTGCACAGATGTTTGAATGGCAGCCCCAGTTGATGAACTGGGA
rJMFF031F22+ AGAAATAGCGAGTGTGTGTGCACAGATGTTTGAATGGCAGCCCCAGTTGATGAACTGGGA
rJMFF018H13+ AGAAATAGCGAGTGTGTGTGCACAGATGTTTGAATGGCAGCCCCAGTTGATGAACTGGGA
____________________________________________________________
consensus AGAAATAGCGAGTGTGTGTGCACAGATGTTTGAATGGCAGCCCCAGTTGATGAACTGGGA
. : . : . : . : . : . :
rJMSF021F22+ GATGCAAGCTTCTGGCAAAGCAGAAAGAGCGCTGAGACCCAAAGTCCACCTGTCCTGCGG
rJMFF033M24+ GATGCAAGCTTCTGGCAAAGCAGAAAGAGCGCTGAGACCCAAAGTCCACCTGTCCTGCGG
rJMFF031F22+ GATGCAAGCTTCTGGCAAAGCAGAAAGAGCGCTGAGACCCAAAGTCCACCTGTCCTGCGG
rJMFF018H13+ GATGCAAGCTTCTGGCAAAGCAGAAAGAGCGCTGAGACCCAAAGTCCACCTGTCCTGCGG
____________________________________________________________
consensus GATGCAAGCTTCTGGCAAAGCAGAAAGAGCGCTGAGACCCAAAGTCCACCTGTCCTGCGG
. : . : . : . : . : . :
rJMSF021F22+ CCATGGCGGAAAGAATATCACTGCCATCAAATTTGCAAGCTTTGGAACCCCAGAAGGTAT
rJMFF033M24+ CCATGGCGGAAAGAATATCACTGCCATCAAATTTGCAAGCTTTGGAACCCCAGAAGGTAT
rJMFF031F22+ CCATGGCGGAAAGAATATCACTGCCATCAAATTTGCAAGCTTTGGAACCCCAGAAGGTAT
rJMFF018H13+ CCATGGCGGAAAGAATATCACTGCCATCAAATTTGCAAGCTTTGGAACCCCAGAAGGTAT
____________________________________________________________
consensus CCATGGCGGAAAGAATATCACTGCCATCAAATTTGCAAGCTTTGGAACCCCAGAAGGTAT
. : . : . : . : . : . :
rJMSF021F22+ ATGCGGCGACTTCCAACAAGGAAGCTGCCATGCCTTCCACTCATTCGACATTTTCGAAAA
rJMFF033M24+ ATGCGGCGACTTCCAACAAGGAAGCTGCCATGCCTTCCACTCATTCGACATTTTCGAAAA
rJMFF031F22+ ATGCGGCGACTTCCAACAAGGAAGCTGCCATGCCTTCCACTCATTCGACATTTTCGAAAA
rJMFF018H13+ ATGCGGCGACTTCCAACAAGGAAGCTGCCATGCCTTCCACTCATTCGACATTTTCGAAAA
rJMFF048P10+ GCCATGCCTTCCACTCATTCGACATTTTCGAAAA
____________________________________________________________
consensus ATGCGGCGACTTCCAACAAGGAAGCTGCCATGCCTTCCACTCATTCGACATTTTCGAAAA
. : . : . : . : . : . :
rJMSF021F22+ GTATTGTGTGGGGTGGAATTCATGCACGGTGCCTGTAACACCAGAAGCATTTGGAGGGGA
rJMFF033M24+ GTATTGTGTGGGGTGGAATTCATGCACGGTGCCTGTAACACCAGAAGCATTTGGAGGGGA
rJMFF031F22+ GTATTGTGTGGGGTGGAATTCATGCACGGTGCCTGTAACACCAGAAGCATTTGGAGGGGA
rJMFF018H13+ GTATTGTGTGGGGTGGAATTCATGCACGGTGCCTGTAACACCAGAAGCATTTGGAGGGGA
rJMFF048P10+ GTATTGTGTGGGGTGGAATTCATGCACGGTGCCTGTAACACCAGAAGCATTTGGAGGGGA
____________________________________________________________
consensus GTATTGTGTGGGGTGGAATTCATGCACGGTGCCTGTAACACCAGAAGCATTTGGAGGGGA
. : . : . : . : . : . :
rJMSF021F22+ TCCATGTCCGAATGTGATGAAGAAAGTGGCGGTTGAGGTTGTCTGCAGTTGATGGATCAA
rJMFF033M24+ TCCATGTCCGAATGTGATGAAGAAAGTGGCGGTTGAGGTTGTCTGCAGTTGATGGATCAA
rJMFF031F22+ TCCATGTCCGAATGTGATGAAGAAAGTGGCGGTTGAGGTTGTCTGCAGTTGATGGATCAA
rJMFF018H13+ TCCATGTCCGAATGTGATGAAGAAAGTGGCGGTTGAGGTTGTCTGCAGTTGATGGATCAA
rJMFF048P10+ TCCATGTCCGAATGTGATGAAGAAAGTGGCGGTTGAGGTTGTCTGCAGTTGATGGATCAA
____________________________________________________________
consensus TCCATGTCCGAATGTGATGAAGAAAGTGGCGGTTGAGGTTGTCTGCAGTTGATGGATCAA
. : . : . : . : . : . :
rJMSF021F22+ CCTAGGAAGGAAAGGGACAGTCACCCCCTGACATAACCCAACAATTTTCAGTAAATTTTA
rJMFF033M24+ CCTAGGAAGGAAAGGGACAGTCACCCCCTGACATAACCCAACAATTTTCAGTAAATTTTA
rJMFF031F22+ CCTAGGAAGGAAAGGGACAGTCACCCCCTGACATAACCCAACAATTTTCAGTAAATTTTA
rJMFF018H13+ CCTAGGAAGGAAAGGGACAGTCACCCCCTGACATAACCCAACAATTTTCAGTAAATTTTA
rJMFF048P10+ CCTAGGAAGGAAAGGGACAGTCACCCCCTGACATAACCCAACAATTTTCAGTAAATTTTA
____________________________________________________________
consensus CCTAGGAAGGAAAGGGACAGTCACCCCCTGACATAACCCAACAATTTTCAGTAAATTTTA
. : . : . : . : . : . :
rJMSF021F22+ CATTGTACTACCATGTTGTTCCATTTTTTGAAGAAGCAAGAAGACACTTCTTCCTCCATA
rJMFF033M24+ CATTGTACTACCATGTTGTTCCATTTTTTGAAGAAGCAAGAAGACACTTCTTCCTCCATA
rJMFF031F22+ CATTGTACTACCATGTTGTTCCATTTTTTGAAGAAGCAAGAAGACACTTCTTCCTCCATA
rJMFF018H13+ CATTGTACTACCATGTTGTTCCATTTTTTGAAGAAGCAAGAAGACACTTCTTCCTCCATA
rJMFF048P10+ CATTGTACTACCATGTTGTTCCATTTTTTGAAGAAGCAAGAAGACACTTCTTCCTCCATA
____________________________________________________________
consensus CATTGTACTACCATGTTGTTCCATTTTTTGAAGAAGCAAGAAGACACTTCTTCCTCCATA
. : . : . : . : . : . :
rJMSF021F22+ GTTACACACCACCATTTGTGTTCATCAATGTATATACAGACGCATAATTAATTTGGTTAG
rJMFF033M24+ GTTACACACCACCATTTGTGTTCATCAATGTATATACAGACGCATAATTAATTTGGTTAG
rJMFF031F22+ GTTACACACCACCATTTGTGTTCATCAATGTATATACAGACGCATAATTAATTTGGTTAG
rJMFF018H13+ GTTACACACCACCATTTGTGTTCATCAATGTATATACAGACGCATAATTAATTTGGTTAG
rJMFF048P10+ GTTACACACCACCATTTGTGTTCATCAATGTATATACAGACGCATAATTAATTTGGTTAG
____________________________________________________________
consensus GTTACACACCACCATTTGTGTTCATCAATGTATATACAGACGCATAATTAATTTGGTTAG
. : . : . : . : . : . :
rJMSF021F22+ AGAGGCAACCCCAGCCAAATTAATCAGACCAT
rJMFF033M24+ AGAGGCAACCCCAGCCAAATTAATCAGACCATTAATTTAATAATCA
rJMFF031F22+ AGAGGCAACCCCAGCCAAATTAATCAGACCATTAATTTAATAATCA
rJMFF018H13+ AGAGGCAACCCCAGCCAAATTAATCAGACCATTAATTTAATAATCATAAAATTACAAATT
rJMFF048P10+ AGAGGCAACCCCAGCCAAATTAATCAGACCATTAATTTAATAATCATAAAATTACAAATT
____________________________________________________________
consensus AGAGGCAACCCCAGCCAAATTAATCAGACCATTAATTTAATAATCATAAAATTACAAATT