Contig 006966:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003G05Sequence579010676 (16)sp|P51819.1|HSP83_IPONI5e-101RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot677006966 (17)sp|P51819.1|HSP83_IPONI2e-76RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF005G01Sequence526010676 (16)sp|P51819.1|HSP83_IPONI4e-79RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot715006966 (17)sp|P51819.1|HSP83_IPONI5e-82RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF022B11Sequence582010676 (16)sp|P51819.1|HSP83_IPONI5e-101RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot782006966 (17)sp|P51819.1|HSP83_IPONI4e-99RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF022D19Sequence451010676 (16)sp|P51819.1|HSP83_IPONI1e-66RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot747006966 (17)sp|P51819.1|HSP83_IPONI2e-88RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF024C07Sequence490010676 (16)sp|P51819.1|HSP83_IPONI2e-75RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot711006966 (17)sp|P51819.1|HSP83_IPONI2e-81RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF030O06Sequence539010676 (16)sp|P51819.1|HSP83_IPONI2e-79RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot686006966 (17)sp|P51819.1|HSP83_IPONI1e-90RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF033E05Sequence518010676 (16)sp|P51819.1|HSP83_IPONI2e-84RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot748006966 (17)sp|P51819.1|HSP83_IPONI5e-108RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF038I13Sequence783006966 (17)sp|P51819.1|HSP83_IPONI8e-97RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF039P24Sequence525010676 (16)sp|P51819.1|HSP83_IPONI4e-84RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot504006966 (17)sp|P51819.1|HSP83_IPONI7e-50RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF042L10Sequence627010676 (16)sp|P51819.1|HSP83_IPONI4e-111RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot643006966 (17)sp|P51819.1|HSP83_IPONI2e-57RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFF045O21Sequence641010676 (16)sp|P51819.1|HSP83_IPONI3e-99RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot658006966 (17)sp|P51819.1|HSP83_IPONI2e-71RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFS063C06Sequence358006966 (17)sp|P51819.1|HSP83_IPONI1e-15RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMFS162C09Sequence579006966 (17)ref|XP_010934628.1|1e-44PREDICTED: heat shock protein 83-like [Elaeis guineensis]
JMSF015F12Sequence520010676 (16)sp|P51819.1|HSP83_IPONI2e-84RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot762006966 (17)sp|P51819.1|HSP83_IPONI1e-101RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMSF020O04Sequence723010676 (16)sp|P51819.1|HSP83_IPONI7e-99RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot739006966 (17)sp|P51819.1|HSP83_IPONI1e-96RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMSF040E02Sequence637010676 (16)sp|P51819.1|HSP83_IPONI4e-116RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot845006966 (17)sp|P51819.1|HSP83_IPONI9e-123RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot
JMSF047P08Sequence640010676 (16)sp|P51819.1|HSP83_IPONI5e-117RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot756006966 (17)sp|P51819.1|HSP83_IPONI5e-100RecName: Full=Heat shock protein 83 [Ipomoea nil] gb|AAA33748.1| heat shock prot

Alignment

This contig is upended


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rJMSF040E02+                           ACTATGTCACTAGGATGAAAGAGGGTCAAAAAGACATCTACTA
                      ____________________________________________________________
consensus                              ACTATGTCACTAGGATGAAAGAGGGTCAAAAAGACATCTACTA
 
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rJMSF015F12+                                                      TGGAGCGCCTCAAGAA
rJMFF033E05+                 GGTGAGAGCAAAAAAGCTGTTGAAAATTCACCATTCNTGGAGCGCCTCAAGAA
rJMSF047P08+                                                      TGGAGCGCCTCAAGAA
rJMSF040E02+          CATCACTGGTGAGAGCAAAAAAGCTGTTGAAAATTCACCATTCCTGGAGCGCCTCAAGAA
rJMFF022B11+                                                           CGCCTCAAGAA
                      ____________________________________________________________
consensus             CATCACTGGTGAGAGCAAAAAAGCTGTTGAAAATTCACCATTCCTGGAGCGCCTCAAGAA
 
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rJMSF015F12+          GAAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMFF033E05+          GAAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMSF020O04+           AAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMSF047P08+          GAAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMFF030O06+                                   GTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMSF040E02+          GAAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMFF038I13+             GGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMFF022B11+          GAAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
rJMFF005G01+                                                                  AATT
rJMFF022D19+                                   GTTGATGCCATTGACGAGTATGCTGTAGNCCAATN
                      ____________________________________________________________
consensus             GAAGGGTTATGAAGTACTGTTTATGGTTGATGCCATTGACGAGTATGCTGTAGGCCAATT
 
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rJMSF015F12+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF033E05+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMSF020O04+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMSF047P08+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF030O06+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMSF040E02+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF038I13+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF022B11+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF005G01+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF024C07+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
rJMFF003G05+                                             CCAAGGAAGGGCTGAAACTTGAAGA
rJMFF022D19+          GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
                      ____________________________________________________________
consensus             GAAGGAGTATGATGGTAAGAAACTGGTGTCAGCCACCAAGGAAGGGCTGAAACTTGAAGA
 
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rJMSF015F12+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF033E05+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMSF020O04+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMSF047P08+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF030O06+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMSF040E02+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF038I13+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF022B11+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF005G01+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF024C07+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF003G05+          CGATGATGAAGAAGGAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
rJMFF022D19+          CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
                      ____________________________________________________________
consensus             CGATGATGAAGAA-GAGAAGAAGAAGCGGGAGGAGAAGAAGAAATCTTTTGAGAACCTTT
 
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rJMSF015F12+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF033E05+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMSF020O04+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMSF047P08+          GCAAGATCATCAAAGATATTCTGGGCGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF030O06+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMSF040E02+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF038I13+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF022B11+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF005G01+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF024C07+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF003G05+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
rJMFF022D19+          GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
JMFS162C09-                                                          GTCTCTGACAGGA
rJMFF045O21+           CAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
                      ____________________________________________________________
consensus             GCAAGATCATCAAAGATATTCTGGGTGACAAAGTCGAGAAGGTGGTTGTCTCTGACAGGA
 
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rJMSF015F12+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF033E05+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMSF020O04+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMSF047P08+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF030O06+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMSF040E02+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF038I13+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF022B11+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF005G01+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF024C07+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF003G05+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF039P24+                                      TGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF022D19+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF042L10+              TGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
JMFS162C09-           TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
rJMFF045O21+          TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
                      ____________________________________________________________
consensus             TTGTTGATTCACCCTGCTGCTTGGTGACTGGTGAGTATGGATGGACAGCAAATATGGAAA
 
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rJMSF015F12+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF033E05+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMSF020O04+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMSF047P08+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF030O06+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMSF040E02+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF038I13+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF022B11+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF005G01+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF024C07+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF003G05+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF039P24+          GGATCATGAAGGCTCAGGCCNTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF022D19+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF042L10+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
JMFS162C09-           GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
rJMFF045O21+          GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
                      ____________________________________________________________
consensus             GGATCATGAAGGCTCAGGCCCTAAGGGACAGCAGCATGAGCTCTTACATGTCTAGCAAGA
 
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rJMSF015F12+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF033E05+          AAACCATGTAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMSF020O04+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMSF047P08+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF030O06+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMSF040E02+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF038I13+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF022B11+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF005G01+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF024C07+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF003G05+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF039P24+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF022D19+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
rJMFF042L10+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
JMFS162C09-           AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGC--AGG
rJMFF045O21+          AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
                      ____________________________________________________________
consensus             AAACCATGGAAATTAACCCTGACAATGGAATCATGGAGGAGCTTAGAAAGAGAGCAGAGG
 
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rJMSF015F12+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF033E05+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMSF020O04+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMSF047P08+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF030O06+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMSF040E02+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF038I13+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF022B11+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF005G01+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF024C07+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF003G05+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF039P24+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF022D19+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF042L10+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
JMFS162C09-           CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
rJMFF045O21+          CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
                      ____________________________________________________________
consensus             CTGATAAGAATGACAAATCAGTGAAGGACCTTGTGTTGCTGTTGTTTGAGACTGCACTCC
 
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rJMSF015F12+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF033E05+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMSF020O04+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMSF047P08+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF030O06+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMSF040E02+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF038I13+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF022B11+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF005G01+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF024C07+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF003G05+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF039P24+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF022D19+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
JMFS063C06-                TCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTTACAGGATGC
rJMFF042L10+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
JMFS162C09-           TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
rJMFF045O21+          TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
                      ____________________________________________________________
consensus             TTACATCCGGTTTCAGTCTTGATGATCCCAACACTTTTGGAGCAAGAATTCACAGGATGC
 
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rJMSF015F12+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF033E05+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMSF020O04+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMSF047P08+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF030O06+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMSF040E02+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF038I13+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF022B11+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF005G01+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF024C07+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF003G05+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF039P24+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF022D19+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
JMFS063C06-           TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
rJMFF042L10+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
JMFS162C09-           TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATCCTGACATGCCTGCAT
rJMFF045O21+          TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
                      ____________________________________________________________
consensus             TGAAGTTGGGTCTCAGCATTGATGAGGAGGAAGCTGGTGATGATGCTGACATGCCTGCAT
 
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rJMSF015F12+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF033E05+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMSF020O04+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMSF047P08+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF030O06+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMSF040E02+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF038I13+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF022B11+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF005G01+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF024C07+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF003G05+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF039P24+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF022D19+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
JMFS063C06-           TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF042L10+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
JMFS162C09-           TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
rJMFF045O21+          TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
                      ____________________________________________________________
consensus             TGGAGGAAGAAGCTGGTGAGGAAAGCAAGATGGAAGAAGTGGACTAAGGGACATATCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015F12+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF033E05+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAA                        
rJMSF020O04+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMSF047P08+          TTTCTTCATTTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF030O06+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAG       
rJMSF040E02+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF038I13+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF022B11+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF005G01+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF024C07+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF003G05+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF039P24+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF022D19+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
JMFS063C06-           TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF042L10+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
JMFS162C09-           TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
rJMFF045O21+          TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
                      ____________________________________________________________
consensus             TTTCTTCA-TTTGTAACAAAAGCTATATTGAGTCAATGAGTCCTTTTCCTTAGTGTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015F12+          TGGCTGTGTTATGTATGAATTT                                      
rJMSF020O04+          TGGCTGTGTTATGTATGAATTT                                      
rJMSF047P08+          TGGC                                                        
rJMSF040E02+          TGGCTGTGTTATGTATGAATTTTC                                    
rJMFF038I13+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
rJMFF022B11+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
rJMFF005G01+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
rJMFF024C07+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
rJMFF003G05+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
rJMFF039P24+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
rJMFF022D19+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGT       
JMFS063C06-           TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGTGCAATAC
rJMFF042L10+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGTGCAATAC
JMFS162C09-           TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGTGCAATAC
rJMFF045O21+          TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGTGCAATAC
                      ____________________________________________________________
consensus             TGGCTGTGTTATGTATGAATTTTCATTGCAGTCATTGTATGTGTTCGGGAAGTGCAATAC
 
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JMFS063C06-           AGTTGCGTTTTGG                                               
rJMFF042L10+          AGTTGCGTTTTGGATT                                            
JMFS162C09-           AGTTGCGTTTTGG                                               
rJMFF045O21+          AGTTGCGTTTTGGATTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AGTTGCGTTTTGGATTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG