Contig 006963:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018K01Sequence385006963 (3)
JMFF042E05Sequence642004628 (2)emb|CAN72245.1|2e-43hypothetical protein VITISV_028705 [Vitis vinifera]598006963 (3)ref|XP_009607458.1|8e-28PREDICTED: uncharacterized protein LOC104101674 isoform X2 [Nicotiana tomentosi
JMFF045J06Sequence592004628 (2)emb|CAN72245.1|8e-35hypothetical protein VITISV_028705 [Vitis vinifera]407006963 (3)

Alignment

This contig is upended


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rJMFF042E05+                                           CAGCGAGGAAGTCCAGGATGCATACGA
                      ____________________________________________________________
consensus                                              CAGCGAGGAAGTCCAGGATGCATACGA
 
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rJMFF042E05+          GCACAACCGGAGGTTGAGAAATCCAGCCACGACTTCGGTTCAACAAGCCATTCACGGTGT
                      ____________________________________________________________
consensus             GCACAACCGGAGGTTGAGAAATCCAGCCACGACTTCGGTTCAACAAGCCATTCACGGTGT
 
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rJMFF018K01+                                                                     T
rJMFF042E05+          GTCATATGCCGTATATGGGAAACCAGATGTCCGACGCCTCATGTTTGAGGTTTTCGACTT
                      ____________________________________________________________
consensus             GTCATATGCCGTATATGGGAAACCAGATGTCCGACGCCTCATGTTTGAGGTTTTCGACTT
 
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rJMFF018K01+          TGAGCAAACCCATCCGNAGGCAGTATNAGGCCTCGGTTNGAGACATAGCAGCACGGTGTT
rJMFF042E05+          TGAGCAAACCCAACCGAAGGCAGTTTAAGGCCTCGGTTTGAGACATAGCAGCACGGTGTT
                      ____________________________________________________________
consensus             TGAGCAAACCCATCCGAAGGCAGTTTAAGGCCTCGGTTTGAGACATAGCAGCACGGTGTT
 
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rJMFF018K01+          NTNCCNTAGTCTGAAGATTCATCGTCAGATTGACAAGAAAAGTAGAAGAGGTTNGAAATT
rJMFF042E05+          CTACCCTAGTCTGAAGATTCATCGTCAGATTGACAAGAAAAGTAGAAGAGGTTCGAAATT
rJMFF045J06+                      GAAGATTCATCGTCAGATTGACAAGAAAAGTAGAAGAGGTTCGAAATT
                      ____________________________________________________________
consensus             CTACCCTAGTCTGAAGATTCATCGTCAGATTGACAAGAAAAGTAGAAGAGGTTCGAAATT
 
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rJMFF018K01+          GTTTGTAGTGAGAGATTGAGATTGCAGATGAGAGGAATGTACAGTTTTCCCCCAATTCCC
rJMFF042E05+          GTTTGTAGTGAGAGATTGAGATTGCAGATGAGAGGAATGTACAGTTTTCCCCCAATTCCC
rJMFF045J06+          GTTTGTAGTGAGAGATTGAGATTGCAGATGAGAGGAATGTACAGTTTTCCCCCAATTCCC
                      ____________________________________________________________
consensus             GTTTGTAGTGAGAGATTGAGATTGCAGATGAGAGGAATGTACAGTTTTCCCCCAATTCCC
 
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rJMFF018K01+          ATGTTAAGATGTNCATCAAATGTACTTGAGTTGTATAAGATGAGATTNTGATTCTCATGG
rJMFF042E05+          ATGTTAAGATGTACATCAAATGTACTTGAGTTGTATAAGATGAGATTCTGATTCTCATGG
rJMFF045J06+          ATGTTAAGATGTACATCAAATGTACTTGAGTTGTATAAGATGAGATTTTGATTCTCATGG
                      ____________________________________________________________
consensus             ATGTTAAGATGTACATCAAATGTACTTGAGTTGTATAAGATGAGATTTTGATTCTCATGG
 
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rJMFF018K01+          ATTCAAACTATAAAATCTTAGAGAGAGAGAGAAAAGCCAGGTTTTAGGGCAAAGTGGGGG
rJMFF042E05+          ATTCAAACTATAAAATCTTAGAGAGAGAGAGAAAAGCCAGGTTTTAGGGCAAAGTGGGGG
rJMFF045J06+          ATTCAAACTATAAAATCTTAGAGAGAGAGAGAAAAGCCAGGTTTTAGGGCAAAGTGGGGG
                      ____________________________________________________________
consensus             ATTCAAACTATAAAATCTTAGAGAGAGAGAGAAAAGCCAGGTTTTAGGGCAAAGTGGGGG
 
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rJMFF018K01+          TTCTAGTGACAGAGAGAAGCCATGNCCAGAATTGAGGAGAAGTTCCAAACGAATGATGAT
rJMFF042E05+          TTCTAGTGACAGAGAGAAGCCATGGCCAGAATTGAGGAGAAGTTCCAAA-GAATGATGAT
rJMFF045J06+          TTTTAGTGACAGAGAGAAGCCATGGCCAGAATTGAGGAGAAGTTCCAAA-GAATGATGAT
                      ____________________________________________________________
consensus             TTCTAGTGACAGAGAGAAGCCATGGCCAGAATTGAGGAGAAGTTCCAAA-GAATGATGAT
 
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rJMFF018K01+          ANCTGGTGCGACATATTTTATTTT                                    
rJMFF042E05+          AACTGGTGTGACATATTTTATTTTAGGGTTTATTCTACTTTTGATCTTGTATTATTTCTA
rJMFF045J06+          AACTGGTGTGACATATTTTATTTTAGGGTTTATTCTACTTTTGATCTTGTATTATTTCTA
                      ____________________________________________________________
consensus             AACTGGTGTGACATATTTTATTTTAGGGTTTATTCTACTTTTGATCTTGTATTATTTCTA
 
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rJMFF042E05+          TTTATGACATGTGATTACTTTGTGCTTGTGAG                            
rJMFF045J06+          TTTATGACATGTGATTACTTTGTGCTTGTGAGAAAAAAATGTTTTAGTTTTAGTTATTTT
                      ____________________________________________________________
consensus             TTTATGACATGTGATTACTTTGTGCTTGTGAGAAAAAAATGTTTTAGTTTTAGTTATTTT