Contig 006950:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G07Sequence506011469 (5)ref|XP_009786662.1|5e-49PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr700006950 (5)ref|XP_009601250.1|1e-49PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos
JMFF040J11Sequence566011469 (5)ref|XP_009786662.1|1e-57PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr690006950 (5)ref|XP_009601250.1|5e-86PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos
JMFF044H08Sequence640011469 (5)ref|XP_009786662.1|3e-84PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr620006950 (5)ref|XP_009601250.1|5e-54PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos
JMSF019J14Sequence530011469 (5)ref|XP_009786662.1|1e-71PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr754006950 (5)ref|XP_009601250.1|2e-121PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos
JMSF032M10Sequence616011469 (5)ref|XP_009786662.1|4e-71PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr746006950 (5)ref|XP_009601250.1|2e-100PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos

Alignment

This contig is upended


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rJMSF019J14+                                CAAAGTGGGATGCCGATTTCTATGTCAAGGTTGATGAT
                      ____________________________________________________________
consensus                                   CAAAGTGGGATGCCGATTTCTATGTCAAGGTTGATGAT
 
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rJMSF019J14+          GATGTCCATGTCAATTTGGGTATGCTCGCTGCAACTCTTGGCCGCCACCGGTCGAAGCCC
                      ____________________________________________________________
consensus             GATGTCCATGTCAATTTGGGTATGCTCGCTGCAACTCTTGGCCGCCACCGGTCGAAGCCC
 
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rJMSF019J14+          AGAGTTTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCCCAAAAGAATGTCAAATAC
                      ____________________________________________________________
consensus             AGAGTTTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCCCAAAAGAATGTCAAATAC
 
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rJMSF019J14+          CATGAACCAGAGTCTTGGAAATTTGGAGAAGAAGGGAACAAATACTTTCGACATGCTACT
                      ____________________________________________________________
consensus             CATGAACCAGAGTCTTGGAAATTTGGAGAAGAAGGGAACAAATACTTTCGACATGCTACT
 
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rJMSF019J14+          GGGCAAATTTATGCCATTTCAAAGGATTTAGCTACATACATTTCAATCAACCAGCCAATC
rJMSF032M10+                                                               GCCAATC
rJMFF040J11+                                                               GCCAATC
rJMFF004G07+                                                               GCCAATC
rJMFF044H08+                                                  TTTCAATCAACCAGCCAATC
                      ____________________________________________________________
consensus             GGGCAAATTTATGCCATTTCAAAGGATTTAGCTACATACATTTCAATCAACCAGCCAATC
 
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rJMSF019J14+          TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMSF032M10+          TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMFF040J11+          TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMFF004G07+          TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMFF044H08+          TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
                      ____________________________________________________________
consensus             TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
 
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rJMSF019J14+          GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMSF032M10+          GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMFF040J11+          GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMFF004G07+          GACCGTATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMFF044H08+          GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
                      ____________________________________________________________
consensus             GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
 
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rJMSF019J14+          CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMSF032M10+          CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMFF040J11+          CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMFF004G07+          CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMFF044H08+          CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
                      ____________________________________________________________
consensus             CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
 
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rJMSF019J14+          GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMSF032M10+          GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMFF040J11+          GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMFF004G07+          GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMFF044H08+          GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
                      ____________________________________________________________
consensus             GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
 
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rJMSF019J14+          GCCCTATTCTAGACTTCTAGTTCAAC-AGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
rJMSF032M10+          GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
rJMFF040J11+          GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATCC
rJMFF004G07+          GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
rJMFF044H08+          GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
                      ____________________________________________________________
consensus             GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
 
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rJMSF019J14+          AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMSF032M10+          AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMFF040J11+          AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMFF004G07+          AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMFF044H08+          AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
                      ____________________________________________________________
consensus             AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
 
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rJMSF019J14+          TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMSF032M10+          TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMFF040J11+          TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMFF004G07+          TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMFF044H08+          TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
                      ____________________________________________________________
consensus             TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
 
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rJMSF019J14+          AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTT   
rJMSF032M10+          AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
rJMFF040J11+          AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
rJMFF004G07+          AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
rJMFF044H08+          AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
                      ____________________________________________________________
consensus             AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
 
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rJMSF032M10+          GAAGGGAGACATTCAAATATTGAGTTATTCAAATATGTTGGGTTTATTGAGTATTTGTAA
rJMFF040J11+          GAAGGGAGACATTCAAATATTGAGTTATTCAAATATGTTGGGTTTATTGAGTATTTGTAA
rJMFF004G07+          GAAGGGAGACATTCAAATAT                                        
rJMFF044H08+          GAAGGGAGACATTCAAATATTGAGTTATTCAAGTATGTTGGGTTTATTGAGTATTTGTAA
                      ____________________________________________________________
consensus             GAAGGGAGACATTCAAATATTGAGTTATTCAAATATGTTGGGTTTATTGAGTATTTGTAA
 
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rJMSF032M10+          GTGC                                                        
rJMFF040J11+          GTGC                                                        
rJMFF044H08+          GTGCAGTGGTATTTTTTCTGGTTCCACGTTTGACAATAAAAATTCTATGATGAAAAAAAG
                      ____________________________________________________________
consensus             GTGCAGTGGTATTTTTTCTGGTTCCACGTTTGACAATAAAAATTCTATGATGAAAAAAAG