Contig 006945:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017K06Sequence549001687 (13)ref|XP_004232206.1|1e-39PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]750006945 (12)ref|NP_568565.2|3e-20uncharacterized protein [Arabidopsis thaliana] sp|Q9FKA5.1|Y5957_ARATH RecName:
JMFF020H23Sequence546001687 (13)ref|XP_004232206.1|9e-40PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]690006945 (12)ref|XP_002870774.1|3e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF023G16Sequence541001687 (13)ref|XP_004232206.1|9e-38PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]741006945 (12)ref|XP_002870774.1|1e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF025A12Sequence284001687 (13)ref|XP_006338424.1|2e-24PREDICTED: uncharacterized protein At5g39570-like [Solanum tuberosum]656006945 (12)ref|XP_002870774.1|9e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF026K23Sequence710006945 (12)ref|XP_002870774.1|1e-24predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF030E18Sequence549001687 (13)ref|XP_004232206.1|2e-39PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]690006945 (12)ref|XP_002870774.1|3e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF044D01Sequence647001687 (13)ref|XP_004232206.1|8e-43PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]612006945 (12)ref|XP_002870774.1|2e-15predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF046J13Sequence547001687 (13)ref|XP_004232206.1|3e-39PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]485006945 (12)
JMFN011K08Sequence490006945 (12)ref|XP_006405620.1|2e-12hypothetical protein EUTSA_v10027782mg [Eutrema salsugineum] gb|ESQ47073.1| hypo
JMFN036P18Sequence285006945 (12)
JMSF021A24Sequence616001687 (13)ref|XP_004232206.1|9e-45PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]754006945 (12)ref|XP_002870774.1|1e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMSF036M15Sequence636013548 (4)ref|XP_009599649.1|4e-14PREDICTED: RING finger protein 10 [Nicotiana tomentosiformis]709006945 (12)ref|XP_002870774.1|6e-19predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021A24+ ATCCGAATACGGATCTGGA
rJMFF023G16+ ATCTGGA
rJMFF017K06+ GAATACGGATCTGGA
                      ____________________________________________________________
consensus ATCCGAATACGGATCTGGA
 
. : . : . : . : . : . :
rJMFF030E18+ CCGAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
rJMFF020H23+ CGAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
rJMSF021A24+ TATGGGCGTCGTAACGAATCCGAATCCGAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
rJMSF036M15+ GAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
rJMFF023G16+ TATGGGCGTCGTAACGAATCCGAATCCGAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
rJMFF026K23+ GAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
rJMFF017K06+ TATGGGCGTCGTAACGAATCCGAATCCGAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
                      ____________________________________________________________
consensus TATGGGCGTCGTAACGAATCCGAATCCGAGTATGGATCCGGTAGGAAGCCAAGCTATGGG
 
. : . : . : . : . : . :
rJMFF030E18+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
rJMFF020H23+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
rJMFF025A12+ GCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
rJMSF021A24+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
rJMSF036M15+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
rJMFF023G16+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
rJMFF026K23+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTAAAGGTTATGGGAGATCT
rJMFF017K06+ CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
                      ____________________________________________________________
consensus CGGGAGGAGGACAGGCCTAGCTATGGCCGTTCTGAGGAGAGTGAAGGTTATGGGAGATCT
 
. : . : . : . : . : . :
rJMFF030E18+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMFF020H23+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMFF025A12+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMSF021A24+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMSF036M15+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMFF023G16+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMFF026K23+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMFF017K06+ TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
rJMFF044D01+ CGGAAACCTAGC
                      ____________________________________________________________
consensus TCCTATGATAGGCCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACCGGAAACCTAGC
 
. : . : . : . : . : . :
rJMFF030E18+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMFF020H23+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMFF025A12+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
JMFN011K08- TGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMSF021A24+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMSF036M15+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMFF023G16+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMFF026K23+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMFF017K06+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
rJMFF044D01+ TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
                      ____________________________________________________________
consensus TATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAATGAT
 
. : . : . : . : . : . :
rJMFF030E18+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMFF020H23+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMFF025A12+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
JMFN011K08- GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMSF021A24+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMSF036M15+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMFF023G16+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMFF026K23+ GAAGAGGAGTACAGGAAACCTAGCTATGGGAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMFF017K06+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
rJMFF046J13+ AGTGATGAAGATGAGTACCGGAAA
rJMFF044D01+ GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
                      ____________________________________________________________
consensus GAAGAGGAGTACAGGAAACCTAGCTATGGAAGGTCCAGTGATGAAGATGAGTACCGGAAA
 
. : . : . : . : . : . :
rJMFF030E18+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF020H23+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF025A12+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
JMFN011K08- CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMSF021A24+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMSF036M15+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF023G16+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF026K23+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF017K06+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF046J13+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
rJMFF044D01+ CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
                      ____________________________________________________________
consensus CCTAGCTATGGAAGGTCCAATGATGAAGAGGAGTACAGGAAACCTAGCTACCAGAGGCGT
 
. : . : . : . : . : . :
rJMFF030E18+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF020H23+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF025A12+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
JMFN011K08- AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
JMFN036P18- TGATGATGATGACAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMSF021A24+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMSF036M15+ AATGGTGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF023G16+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF026K23+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF017K06+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF046J13+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
rJMFF044D01+ AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
                      ____________________________________________________________
consensus AATGATGATGATGATGAGAGCTATGGTCGCAGGCAGAGGCGTGATGATGATGATGATGAT
 
. : . : . : . : . : . :
rJMFF030E18+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF020H23+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF025A12+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
JMFN011K08- GACAGCT-TGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
JMFN036P18- GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMSF021A24+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMSF036M15+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF023G16+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF026K23+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF017K06+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF046J13+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
rJMFF044D01+ GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
                      ____________________________________________________________
consensus GACAGCTATGGTCGCAAGAAATATGGGGGTAGGGATGAAGATGATGAGGAGCGTGAGAGG
 
. : . : . : . : . : . :
rJMFF030E18+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF020H23+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF025A12+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
JMFN011K08- CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
JMFN036P18- CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMSF021A24+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMSF036M15+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF023G16+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF026K23+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF017K06+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF046J13+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
rJMFF044D01+ CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
                      ____________________________________________________________
consensus CATCACCATCACCACCATCGCGTGCAGTATAATGATTAAGCATAATTGGCAGGTTGCCTT
 
. : . : . : . : . : . :
rJMFF030E18+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF020H23+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF025A12+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
JMFN011K08- CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
JMFN036P18- CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMSF021A24+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMSF036M15+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF023G16+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF026K23+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF017K06+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF046J13+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
rJMFF044D01+ CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
                      ____________________________________________________________
consensus CCCAACAGGATTCCTATTTCCTGCCTTAATAATAAATTTCCCTCATATTATATGTGTTTT
 
. : . : . : . : . : . :
rJMFF030E18+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF020H23+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF025A12+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
JMFN011K08- TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGT-AT
JMFN036P18- TGAATTTGCCTACATTGAAC
rJMSF021A24+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMSF036M15+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF023G16+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF026K23+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF017K06+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF046J13+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
rJMFF044D01+ TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
                      ____________________________________________________________
consensus TGAATTTGTCTACATTGAACTATAAGAATGTATGTGGTTTGCTTCTCAGGCTGCTGTAAT
 
. : . : . : . : . : . :
rJMFF030E18+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTAT
rJMFF020H23+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATG
rJMFF025A12+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
JMFN011K08- AAAGTCCCACATGTTTGGGATGGTGTTC
rJMSF021A24+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
rJMSF036M15+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGNATG
rJMFF023G16+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
rJMFF026K23+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
rJMFF017K06+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
rJMFF046J13+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
rJMFF044D01+ AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
                      ____________________________________________________________
consensus AAAGTCCCACATGTTTGGGATGGTGTTCAAACTTTTGTGCTTTTCTTGCACTTATGTATG
 
. : . : . : . : . : . :
rJMFF025A12+ CAAC
rJMSF021A24+ CAACTATCT
rJMSF036M15+ CAACTATCNTGTT
rJMFF023G16+ CAACTATCTTGTTT
rJMFF026K23+ CAACTATCTTGTTTG
rJMFF017K06+ CAACTATCTTGTTTG
rJMFF046J13+ CAACTATCTTGTTTGTTGTTTTTAATGGTATTGCGTTAAAT
rJMFF044D01+ CAACTATCTTGTTTGTTGTTTTTAATGGTATTGCGTTAAATACTTAAAAAAAAAAAAAAT
                      ____________________________________________________________
consensus CAACTATCTTGTTTGTTGTTTTTAATGGTATTGCGTTAAATACTTAAAAAAAAAAAAAAT