Contig 006936:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026H17Sequence519007392 (5)ref|XP_009777394.1|2e-61PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris]704006936 (7)ref|XP_006355077.1|1e-52PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMFF043F23Sequence634007392 (5)ref|XP_006355077.1|2e-114PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum588006936 (7)ref|XP_006355077.1|3e-37PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMFS059A03Sequence160006936 (7)
JMSF018O22Sequence302007392 (5)gb|EPS74138.1|3e-45hypothetical protein M569_00617, partial [Genlisea aurea]764006936 (7)ref|XP_006355077.1|3e-71PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMSF023O22Sequence689007392 (5)ref|XP_009777394.1|6e-126PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris]768006936 (7)ref|XP_006355077.1|2e-57PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMSF025M23Sequence670006936 (7)ref|XP_009777394.1|2e-52PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris]
JMSF041C06Sequence789007392 (5)ref|XP_009627948.1|2e-166PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana tomentosifor747006936 (7)ref|XP_006355077.1|7e-55PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018O22+ ACCCCCGCCACCACCACAACC
rJMSF023O22+ ACC
                      ____________________________________________________________
consensus ACCCCCGCCACCACCACAACC
 
. : . : . : . : . : . :
rJMSF018O22+ AGCAGAGGATGTTGCAGTTTCAACCACCGAGATTCCTGCCCCCGTGCCTCCTGTCAAATT
rJMSF023O22+ AGCAGAGGATGTTGCAGTTTCAACCACCGAGATTCCTGCCCCCGTGCCTCCTGTCAAATT
                      ____________________________________________________________
consensus AGCAGAGGATGTTGCAGTTTCAACCACCGAGATTCCTGCCCCCGTGCCTCCTGTCAAATT
 
. : . : . : . : . : . :
rJMSF018O22+ TGAAACCGATGATCTACTTGGGTTAAATGCTCCCACGTCAGATGTGTCTGCGATTGAGGA
rJMSF023O22+ TGAAACCGATGATCTACTTGGGTTAAATGCTCCCACGTCAGATGTGTCTGCGATTGAGGA
rJMFF026H17+ GTCAGATGTGTCTGCGATTGAGGA
rJMSF025M23+ TCAGATGTGTCTGCGATTGAGGA
rJMSF041C06+ GGTTAAATGCTCCCACGTCAGATGTGTCTGCGANTGAGGA
                      ____________________________________________________________
consensus TGAAACCGATGATCTACTTGGGTTAAATGCTCCCACGTCAGATGTGTCTGCGATTGAGGA
 
. : . : . : . : . : . :
rJMSF018O22+ AAGCAACGCGTTGGCTTTGGCTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMSF023O22+ AAGCAA--CGTTGGCTTTGGCTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMFF026H17+ AAGCAACGCGTTGGCTTTGGCTATAGTTTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMSF025M23+ AAGCAACGCGTTGGCTTTGGNTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMSF041C06+ AAGCAACGCGTTGGCTTTGGCTATAG-TTCCATCTNGGGCAACATCCGAAACTGTACAGC
                      ____________________________________________________________
consensus AAGCAACGCGTTGGCTTTGGCTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
 
. : . : . : . : . : . :
rJMSF018O22+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
rJMSF023O22+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
rJMFF026H17+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
rJMSF025M23+ CCAAAGANTTCGATCGTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCANCAANT
rJMSF041C06+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
                      ____________________________________________________________
consensus CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
 
. : . : . : . : . : . :
rJMSF018O22+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMSF023O22+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMFF026H17+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMSF025M23+ TGTCAACACCTCAGGAGCGGCAATTGNCTGGTGGATTGGATTCGCTCACTNTTAACAGTT
rJMSF041C06+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMFF043F23+ AGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
                      ____________________________________________________________
consensus TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
 
. : . : . : . : . : . :
rJMSF018O22+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMSF023O22+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMFF026H17+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMSF025M23+ TATACGACGAGGGCGCNTNCAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMSF041C06+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMFF043F23+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
                      ____________________________________________________________
consensus TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
 
. : . : . : . : . : . :
rJMSF018O22+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMSF023O22+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMFF026H17+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMSF025M23+ ACCCGTTTGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMSF041C06+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMFF043F23+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
                      ____________________________________________________________
consensus ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
 
. : . : . : . : . : . :
rJMSF018O22+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMSF023O22+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMFF026H17+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMSF025M23+ TCCAACTCGCTCCAATGCCTCANCCAAANCCCTTCGGTCCATTCCATCCGGCTGNTGCTG
rJMSF041C06+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMFF043F23+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
                      ____________________________________________________________
consensus TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
 
. : . : . : . : . : . :
rJMSF018O22+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMSF023O22+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMFF026H17+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMSF025M23+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACNATCCTTTNGGNGACACGGGNT
rJMSF041C06+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMFF043F23+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
                      ____________________________________________________________
consensus CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
 
. : . : . : . : . : . :
rJMSF018O22+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMSF023O22+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMFF026H17+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMSF025M23+ TNGGGGCATTCCCCGCAAATAATGGTGATGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMSF041C06+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMFF043F23+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
                      ____________________________________________________________
consensus TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
 
. : . : . : . : . : . :
rJMSF018O22+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMSF023O22+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMFF026H17+ CGTTTGGGGGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMSF025M23+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMSF041C06+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
JMFS059A03+ GGGATTTCGGTATAGATGATTTTGGG
rJMFF043F23+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
                      ____________________________________________________________
consensus CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
 
. : . : . : . : . : . :
rJMSF018O22+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMSF023O22+ GTGACAATATGAGTGTAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMFF026H17+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMSF025M23+ GTGACAATATGAGTGCAGGCCATGGTTTGANGATGATATGTAGATNGGTTTTTTCATTGA
rJMSF041C06+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
JMFS059A03+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMFF043F23+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
                      ____________________________________________________________
consensus GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
 
. : . : . : . : . : . :
rJMSF018O22+ ACAAATGCATGCATGCATTGAGAT
rJMSF023O22+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATT
rJMFF026H17+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
rJMSF025M23+ ACAAATGCANGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATT
rJMSF041C06+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
JMFS059A03+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
rJMFF043F23+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
                      ____________________________________________________________
consensus ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
 
. : . : . : . : . : . :
rJMFF026H17+ GGTATTGTGTT
rJMSF041C06+ GGTATTGTGTTATCAAAACTTCATGGTTTGCAAAC
JMFS059A03+ GGTATTGTGTT
rJMFF043F23+ GGTATTGTGTTATCAAAACTTCATGGTTTGCAAACTTCATAGTCATTTTTTATTTGAAAG
                      ____________________________________________________________
consensus GGTATTGTGTTATCAAAACTTCATGGTTTGCAAACTTCATAGTCATTTTTTATTTGAAAG