Contig 006933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008E06Sequence514006933 (6)ref|XP_009599928.1|3e-39PREDICTED: ethylene-responsive transcription factor ERF011-like [Nicotiana tome701006933 (6)ref|XP_010315978.1|3e-63PREDICTED: ethylene-responsive transcription factor ERF011 [Solanum lycopersicu
JMFF042I22Sequence625006933 (6)ref|XP_010315978.1|7e-66PREDICTED: ethylene-responsive transcription factor ERF011 [Solanum lycopersicu619006933 (6)ref|XP_010315978.1|2e-69PREDICTED: ethylene-responsive transcription factor ERF011 [Solanum lycopersicu
JMFF048A08Sequence404006933 (6)ref|XP_009599928.1|2e-32PREDICTED: ethylene-responsive transcription factor ERF011-like [Nicotiana tome204006933 (6)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-                                    GCGTTAGGGAGCGACGAAACACTGGAGCTGCTTAA
                      ____________________________________________________________
consensus                                      GCGTTAGGGAGCGACGAAACACTGGAGCTGCTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           CAAAGCCAAATTTCATGGGTGTTCTTTCTCTCTCTAAAATTCCTCCAATCGTGGCTTTAG
                      ____________________________________________________________
consensus             CAAAGCCAAATTTCATGGGTGTTCTTTCTCTCTCTAAAATTCCTCCAATCGTGGCTTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           ATTACAGGGAAAGATAGGATTTAGATACAATCAGTTTATCAGTCGATATATATAGGCAGA
rJMFF008E06+                                                             ATAGGCAGA
                      ____________________________________________________________
consensus             ATTACAGGGAAAGATAGGATTTAGATACAATCAGTTTATCAGTCGATATATATAGGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           TTCACAGCGCATAATTATGAATTTGAAGGGCGAGAAGATGGAGATGGAAGGGGAAGTTGT
rJMFF008E06+          TTCCCAGNGCATAATTATGAATTTGAAGGGCGAGAAGATGGAGATGGAAGGGGAAGTTGT
                      ____________________________________________________________
consensus             TTCCCAGCGCATAATTATGAATTTGAAGGGCGAGAAGATGGAGATGGAAGGGGAAGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           GGGGTCGTGTTGTTCAGAGAAGAGGAAGAACGAGAGACCTTATAAAGGAATCAGGATGAG
JMFF008E06-                             GAAGAGGAAGAACGAGAGACCTTATAAAGGAATCAGGATGAG
JMFF048A08-                             GAAGAGGAAGAACGAGAGACCTTATAAAGGAATCAGGATGAG
rJMFF008E06+          GGGGTNGTGTTGTTCAGAGAAGAGGAAGAACGAGAGNCCTTNTAAAGGAATCAGGATGAG
rJMFF042I22+                                                  TATAAAGGAATCAGGATGAG
                      ____________________________________________________________
consensus             GGGGTCGTGTTGTTCAGAGAAGAGGAAGAACGAGAGACCTTATAAAGGAATCAGGATGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           GAAGTGGGGTAAATGGGTGGCCGAAATCAGGGAGCCGAACAAGCGGTCCAGGATATGGTT
JMFF008E06-           GAAGTGGGGTAAATGGGTGGCCGAAATCAGGGAGCCGAACAAGCGGTCCAGGATATGGTT
JMFF048A08-           GAAGTGGGGTAAATGGGTGGCCGAAATCAGGGAGCCGAACAAGCGGTCCAGGATATGGTT
rJMFF008E06+          GAAGTGGGGTAAATGGGTGGCCGAAATCAGGGAGCCGAACAAGCGGTCCAGGATATGGTT
rJMFF042I22+          GAAGTGGGGTAAATGGGTGGCCGAAATCAGGGAGCCGAACAAGCGGTCCAGGATATGGTT
                      ____________________________________________________________
consensus             GAAGTGGGGTAAATGGGTGGCCGAAATCAGGGAGCCGAACAAGCGGTCCAGGATATGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           AGGATCCTATTCGACGCCGGTAGCGGCGGCGAGAGCCTACGACACCGCCGTCTACTACCT
JMFF008E06-           AGGATCCTATTCGACGCCGGTAGCGGCGGCGAGAGCCTACGACACCGCCGTCTACTACCT
JMFF048A08-           AGGATCCTATTCGACGCCGGTAGCGGCGGCGAGAGCCTACGACACCGCCGTCTACTACCT
rJMFF008E06+          AGGATCCTATTCGACGCCGGTAGCGGCGGCGAGAGCCTNCGACNCCGCCGTTTNCTACCT
rJMFF042I22+          AGGATCCTATTCGACGCCGGTAGCGGCGGCGAGAGCCTACGACACCGCCGTCTACTACCT
                      ____________________________________________________________
consensus             AGGATCCTATTCGACGCCGGTAGCGGCGGCGAGAGCCTACGACACCGCCGTCTACTACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042I22-           CCGCGGGCCGTCGGC                                             
JMFF008E06-           CCGCGGGCCGTCGGCGCGGTTGAACTTCCCGGAGCTGCTGGGTTAGCGACGGCGCCGGAC
JMFF048A08-           CCGCGGGCC                                                   
rJMFF008E06+          CCGCGGGCCGTNGGCGCGGTTGAACTTCCCGGAGCTGCT-GGTTAGCGACGGCGCCGGAC
rJMFF042I22+          CCGCGGGCCGTCGGCGCGGTTGAACTTCCCGGAGCTGCT-GGTTAGCGACGGCGCCGGAC
                      ____________________________________________________________
consensus             CCGCGGGCCGTCGGCGCGGTTGAACTTCCCGGAGCTGCT-GGTTAGCGACGGCGCCGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF008E06-           TCAGCGACTTGTCCGCCGCTTCNATTCGGAAGAGAGCGGTCGAAGTCNGCGCCAGAGTG 
rJMFF008E06+          TCAGCGACTTGTCCGCCGCTTNGATTNGGAAGAGAGCGGTNGAAGTCGGCGCCAGAGTGG
rJMFF042I22+          TCAGCGACTTGTCCGCCGCTTCGATTCGGAAGAGAGCGGTCGAAGTCGGCGCCAGAGTGG
                      ____________________________________________________________
consensus             TCAGCGACTTGTCCGCCGCTTCGATTCGGAAGAGAGCGGTCGAAGTCGGCGCCAGAGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008E06+          ACGCAATCCAAACCTCCCTCGGCGGCCACGACCNCCGCCCCTACAAGCAGCGCGACGGCG
rJMFF042I22+          ACGCAATCCAAACCTCCCTCGGCGGCCACGACCACCGCCCCTACAAGCAGCGCGACGGCG
                      ____________________________________________________________
consensus             ACGCAATCCAAACCTCCCTCGGCGGCCACGACCACCGCCCCTACAAGCAGCGCGACGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008E06+          AGCGTGAAAGCCCTTGCGCGACTNGACTGAAGCCGTGTTGGTTTCAGGAGAAGCCCGACT
rJMFF042I22+          AGCGTGAAAGCCCTTGCGCGACTCGACTGAAGCCGTGTTGGTTTCAGGAGAAGCCCGACT
                      ____________________________________________________________
consensus             AGCGTGAAAGCCCTTGCGCGACTCGACTGAAGCCGTGTTGGTTTCAGGAGAAGCCCGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008E06+          TGAACGAGAAACCCGAACCCGAAGACCCGGATAGCGGAGATTACTGGTGACTGGTGAGCA
rJMFF048A08+                                       GATAGCGGAGATTACTGGTGACTGGTGAGCA
rJMFF042I22+          TGAACGAGAAACCCGAACCCGAAGACCCGGATAGCGGAGATTACTGGTGACTGGTGAGCA
                      ____________________________________________________________
consensus             TGAACGAGAAACCCGAACCCGAAGACCCGGATAGCGGAGATTACTGGTGACTGGTGAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008E06+          ATAAATAAATAAATAAC-AAAAAAAAAATAAAAATTAATTGTACTTTTGTTAGGTTGCGC
rJMFF048A08+          ATAAATAAATAAATAAC-AAAAAAAAAATAAAAATTAATTGTACTTTTGTTAGGTTGCGC
rJMFF042I22+          ATAAATAAATAAATAACAAAAAAAAAAATAAAAATTAATTGTACTTTTGTTAGGTTGCGC
                      ____________________________________________________________
consensus             ATAAATAAATAAATAAC-AAAAAAAAAATAAAAATTAATTGTACTTTTGTTAGGTTGCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008E06+          TGGTAAACAAGCGCCCAGTAGTTTCTTCTTTCATCTGGTAAATTAAACTAGCTAGCCAAG
rJMFF048A08+          TGGTAAACAAGCGCCCAGTAGTTTCTTCTTTCATCTGGTAAATTAAACTAGTTAGCCAAG
rJMFF042I22+          TGGTAAACAAGCGCCCAGTAGTTTCTTCTTTCATCTGGTAAATTAAACTAGCTAGCCAAG
                      ____________________________________________________________
consensus             TGGTAAACAAGCGCCCAGTAGTTTCTTCTTTCATCTGGTAAATTAAACTAGCTAGCCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF008E06+          CTACCTTGTTTTATCTTCTTCATTTTATAAATAT                          
rJMFF048A08+          CTACCTTGTTTTATCTTCTTCATTTTATAAATATTATTTACCCTAGTTTTTTAC      
rJMFF042I22+          CTACCTTGTTTTATCTTCTTCATTTTATAAATATTATTTACCCTAGTTTTTTACTGTTAT
                      ____________________________________________________________
consensus             CTACCTTGTTTTATCTTCTTCATTTTATAAATATTATTTACCCTAGTTTTTTACTGTTAT