Contig 006925:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007F13Sequence540006925 (6)ref|XP_009781542.1|8e-99PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 634006925 (6)ref|XP_004230391.1|8e-70PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMFF041L23Sequence647012997 (14)ref|XP_009784886.1|8e-62PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 622006925 (6)ref|XP_009781542.1|1e-75PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMFF049N03Sequence633012997 (14)ref|XP_009784886.1|8e-58PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 646006925 (6)ref|XP_007023750.1|5e-99Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao] g
JMSF020A02Sequence680012997 (14)ref|XP_009784887.1|5e-53PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 709006925 (6)ref|XP_009781542.1|3e-100PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMSF048C05Sequence692012997 (14)ref|XP_009784886.1|8e-82PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 753006925 (6)ref|XP_009781542.1|5e-115PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF049N03+ GCCAAAAGAGAAAAGCTCAAGATGCAGCTAAAAAGAATGA
                      ____________________________________________________________
consensus GCCAAAAGAGAAAAGCTCAAGATGCAGCTAAAAAGAATGA
 
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rJMFF049N03+ TCCTTTCGCATCCTGGGATCGATCCAAAAGCAGTGGCGCTGTCCCCCAACTACAGGGAGC
                      ____________________________________________________________
consensus TCCTTTCGCATCCTGGGATCGATCCAAAAGCAGTGGCGCTGTCCCCCAACTACAGGGAGC
 
. : . : . : . : . : . :
rJMFF049N03+ AAAGTTTTTCTCGTTGAAGAGCTCGCGAAATGCACAAATAACTTCTCAGAAGCCAATACT
                      ____________________________________________________________
consensus AAAGTTTTTCTCGTTGAAGAGCTCGCGAAATGCACAAATAACTTCTCAGAAGCCAATACT
 
. : . : . : . : . : . :
rJMFF049N03+ GTTGGATCTGGAGGTTATGGGAAGGTATACAGAGGAATTCTTCCTCATGGACAACTAATT
                      ____________________________________________________________
consensus GTTGGATCTGGAGGTTATGGGAAGGTATACAGAGGAATTCTTCCTCATGGACAACTAATT
 
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rJMFF049N03+ CCCATCAAAAGATCTCAGCAAGGATCTATGCAGGGCGCTCCCGAGTTCAAATCTGAGATT
                      ____________________________________________________________
consensus CCCATCAAAAGATCTCAGCAAGGATCTATGCAGGGCGCTCCCGAGTTCAAATCTGAGATT
 
. : . : . : . : . : . :
rJMFF049N03+ GAGCTTCTCTCGAGGGTTCACCACAAGAACGTCGTTGACCTTGTTGGGTTTTGTTTTGAT
                      ____________________________________________________________
consensus GAGCTTCTCTCGAGGGTTCACCACAAGAACGTCGTTGACCTTGTTGGGTTTTGTTTTGAT
 
. : . : . : . : . : . :
rJMFF049N03+ CAAGGCGAACAGATACTAATCTATGAATTTATACCAAATGGTACACTGAAAGAAAGTCTG
                      ____________________________________________________________
consensus CAAGGCGAACAGATACTAATCTATGAATTTATACCAAATGGTACACTGAAAGAAAGTCTG
 
. : . : . : . : . : . :
rJMFF049N03+ ACAGGGAAATCTGGAATCAAGTTAGATTGGATGAGGAGACTTAGGATTGCTCTTGGAGCG
JMFF007F13- AGCG
rJMSF048C05+ AGCG
                      ____________________________________________________________
consensus ACAGGGAAATCTGGAATCAAGTTAGATTGGATGAGGAGACTTAGGATTGCTCTTGGAGCG
 
. : . : . : . : . : . :
rJMFF049N03+ GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
rJMSF020A02+ TCCANCGCGACATC
JMFF007F13- GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
rJMSF048C05+ GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
                      ____________________________________________________________
consensus GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
 
. : . : . : . : . : . :
rJMFF049N03+ AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
rJMSF020A02+ AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
JMFF007F13- AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
rJMSF048C05+ AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
                      ____________________________________________________________
consensus AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
 
. : . : . : . : . : . :
rJMFF049N03+ TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMSF020A02+ TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
JMFF007F13- TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMSF048C05+ TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMFF007F13+ GCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMFF041L23+ CACTCAAGTTAAAGGAACTATG
                      ____________________________________________________________
consensus TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
 
. : . : . : . : . : . :
rJMFF049N03+ GGGTAC
rJMSF020A02+ GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
JMFF007F13- GGGTACTTGGATCCCGAATATTACATGACGAACCAGTCGACAGAGAAGAGCGATGTTTAC
rJMSF048C05+ GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
rJMFF007F13+ GGGTACTTGGATCCCGAATATTACATGACGAACCAGTCGACAGAGAAGAGCGATGTTTAC
rJMFF041L23+ GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
                      ____________________________________________________________
consensus GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
 
. : . : . : . : . : . :
rJMSF020A02+ AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
JMFF007F13- AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
rJMSF048C05+ AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
rJMFF007F13+ AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
rJMFF041L23+ AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
                      ____________________________________________________________
consensus AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
 
. : . : . : . : . : . :
rJMSF020A02+ TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
JMFF007F13- TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
rJMSF048C05+ TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
rJMFF007F13+ TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
rJMFF041L23+ TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
                      ____________________________________________________________
consensus TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
 
. : . : . : . : . : . :
rJMSF020A02+ AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
JMFF007F13- AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
rJMSF048C05+ AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
rJMFF007F13+ AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
rJMFF041L23+ AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
                      ____________________________________________________________
consensus AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
 
. : . : . : . : . : . :
rJMSF020A02+ GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
JMFF007F13- GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
rJMSF048C05+ GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
rJMFF007F13+ GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
rJMFF041L23+ GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
                      ____________________________________________________________
consensus GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
 
. : . : . : . : . : . :
rJMSF020A02+ GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
JMFF007F13- GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTC
rJMSF048C05+ GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
rJMFF007F13+ GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
rJMFF041L23+ GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
                      ____________________________________________________________
consensus GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
 
. : . : . : . : . : . :
rJMSF020A02+ TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
rJMSF048C05+ TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
rJMFF007F13+ TCGACTTCAGAGAGCTATTCGTGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
rJMFF041L23+ TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
                      ____________________________________________________________
consensus TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
 
. : . : . : . : . : . :
rJMSF020A02+ AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
rJMSF048C05+ AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
rJMFF007F13+ AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
rJMFF041L23+ AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
                      ____________________________________________________________
consensus AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
 
. : . : . : . : . : . :
rJMSF020A02+ TTGAACAACTTTTTGTTCTATTGNGACATTTCTATATGTNNGCATTATTTCNTGGAGAAT
rJMSF048C05+ TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
rJMFF007F13+ TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
rJMFF041L23+ TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
                      ____________________________________________________________
consensus TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
 
. : . : . : . : . : . :
rJMSF020A02+ GGAGATGGATC
rJMSF048C05+ GGAGATGGATC
rJMFF007F13+ GGAGATGGATCAAGTGTATAGTAGCATATATATTAT
rJMFF041L23+ GGAGATGGATCAAGTGTATAGTAGCATATATATTATTGAATGGCAAATCTGAATTGACCG
                      ____________________________________________________________
consensus GGAGATGGATCAAGTGTATAGTAGCATATATATTATTGAATGGCAAATCTGAATTGACCG