Contig 006924:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF050O18-                                                                     GT
                      ____________________________________________________________
consensus                                                                       GT
 
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JMFF050O18-           TTATAACGTCTTTATGGCTGTTGAGCAGCACTTTGCACGCGATTGGAAATCGTTCTCTGC
                      ____________________________________________________________
consensus             TTATAACGTCTTTATGGCTGTTGAGCAGCACTTTGCACGCGATTGGAAATCGTTCTCTGC
 
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JMFF050O18-           TGCAGTGGAAGACCCCGAGAAAATTTCCGCTTGCTTCGACTGCAACATTTGCCTCGACTT
                      ____________________________________________________________
consensus             TGCAGTGGAAGACCCCGAGAAAATTTCCGCTTGCTTCGACTGCAACATTTGCCTCGACTT
 
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JMFF050O18-           TGCCAGCGATCCGGTGGTCACTCTTTGCGGCCATCTCTACTGTTGGCCTTGCATCTACGA
                      ____________________________________________________________
consensus             TGCCAGCGATCCGGTGGTCACTCTTTGCGGCCATCTCTACTGTTGGCCTTGCATCTACGA
 
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JMFF050O18-           GTGGTTTCGCATCCAGAGCGATTCAGAAGAGCCTCTGCAGTGCCCCGTGTGCAAGGCCGA
                      ____________________________________________________________
consensus             GTGGTTTCGCATCCAGAGCGATTCAGAAGAGCCTCTGCAGTGCCCCGTGTGCAAGGCCGA
 
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JMFF050O18-           GCTATCAGACACGTCTGTAGTCCCGCTTTACGGCAGTGGCAAGAAACTGCCCGAGTCTCA
rJMFF050O18+                                                            CCGAGTCTCA
rJMFF041L01+                                                            CCGAGTCTCA
                      ____________________________________________________________
consensus             GCTATCAGACACGTCTGTAGTCCCGCTTTACGGCAGTGGCAAGAAACTGCCCGAGTCTCA
 
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JMFF050O18-           CCCCGAAGGCGGCAACAAGCCTCCCGCTCTAAAGGTGCCCCCGAGGCCGCCCGCCAGTGC
rJMFF050O18+          CCCCGAAGGCGGCAACAAGCCTCCCGCTCTAAAGGTGCCCCCGAGGCCGCCCGCCAGTGC
rJMFF041L01+          CCCCGAAGGCGGCAACAAGCCTCCCGCTCTAAAGGTGCCCCCGAGGCCGCCCGCCAGTGC
                      ____________________________________________________________
consensus             CCCCGAAGGCGGCAACAAGCCTCCCGCTCTAAAGGTGCCCCCGAGGCCGCCCGCCAGTGC
 
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JMFF050O18-           ACAGGCGTTGGCGAGTCCCAATTCCCGGCCACTTTCGTATCACACAGGCAATGCCTCGTT
rJMFF050O18+          ACAGGCGTTGGCGAGTCCCAATTCCCGGCCACTTTCGTATCACACAGGCAATGCCTCGTT
rJMFF041L01+          ACAGGCGTTGGCGAGTCCCAATTCCCAGCCACTTTCGTATCACACAGGCAATGCCTCGTT
                      ____________________________________________________________
consensus             ACAGGCGTTGGCGAGTCCCAATTCCCGGCCACTTTCGTATCACACAGGCAATGCCTCGTT
 
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JMFF050O18-           CAACCTTGGAGCTGTCAATGCTCCCGAGGCCGGGATGCTCGGGGAAATGGTGTACGCTAG
rJMFF050O18+          CAACCTTGGAGCTGTCAATGCTCCCGAGGCCGGGATGCTCGGGGAAATGGTGTACGCTAG
rJMFF041L01+          CAACCTTGGAGCCGTCAATGCTCCCGAGGCCGGGATGCTCGGGGAAATGGTGTACGCTAG
                      ____________________________________________________________
consensus             CAACCTTGGAGCTGTCAATGCTCCCGAGGCCGGGATGCTCGGGGAAATGGTGTACGCTAG
 
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JMFF050O18-           GGTGTTCGGGAACTCGGAGAGCCTTTACGCGTACCCTAACTCGTACCAGGCCCGAGGAAA
rJMFF050O18+          GGTGTTCGGGAACTCGGAGAGCCTTTACGCGTACCCTAACTCGTACCAGGCCCGAGGAAA
rJMFF041L01+          GGTGTTCGGGAACTCGGAGAGCCTTTACGCGTACCCTAACTCGTACCAGGCCCGAGGAAA
                      ____________________________________________________________
consensus             GGTGTTCGGGAACTCGGAGAGCCTTTACGCGTACCCTAACTCGTACCAGGCCCGAGGAAA
 
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JMFF050O18-           CAGCAGCCCGAGGCTGAAGCGACAGGAGATGCAGGTGGATAAGTCACTGAACAGAATTTA
rJMFF050O18+          CAGCAGCCCGAGGCTGAGGCGACAGGAGATGCAGGTGGATAAGTCACTGAACAGAATTAC
rJMFF041L01+          CAGCAGCCCGAGGCTGAGGCGACAGGAGATGCAGGTGGATAAGTCACTGAACAGAATTAC
                      ____________________________________________________________
consensus             CAGCAGCCCGAGGCTGAGGCGACAGGAGATGCAGGTGGATAAGTCACTGAACAGAATTAC
 
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JMFF050O18-           CACCTTCCTTTTTCTCTGCTTCCTTCT                                 
rJMFF050O18+          AACCTTCCTTTTCTTCTGCTTCCTTCTGTGTCTATTGCTGTTTTAGAATCATTTTAGTAT
rJMFF041L01+          AACCTTCCTTTTCTTCTGCTTCCTTCTGTGTCTATTGCTGTTTTAGAATCATTTTAGTAT
                      ____________________________________________________________
consensus             AACCTTCCTTTTCTTCTGCTTCCTTCTGTGTCTATTGCTGTTTTAGAATCATTTTAGTAT
 
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rJMFF050O18+          TCTGTCAGTCTCTGTATAAAAAAATGGTCTCATCCATGTTTGTGAGGATCTTGATGTGTG
rJMFF041L01+          TCTGTCAGTCTCTGTAT-AAAAAATGGTCTCATCCATGTTTGTGAGGATCTTGATGTGTG
                      ____________________________________________________________
consensus             TCTGTCAGTCTCTGTATAAAAAAATGGTCTCATCCATGTTTGTGAGGATCTTGATGTGTG
 
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rJMFF050O18+          TAACACCATATATAATACATGATGTGATCTCAAGTTTT                      
rJMFF041L01+          TAACACCATATATAATACATGATGTGATCTCAAGTTTTGGCAGCCAAAAAAAAAAAAAAA
                      ____________________________________________________________
consensus             TAACACCATATATAATACATGATGTGATCTCAAGTTTTGGCAGCCAAAAAAAAAAAAAAA