Contig 006923:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041J06Sequence652014229ref|XP_002532369.1|4e-128conserved hypothetical protein [Ricinus communis] gb|EEF30012.1| conserved hypot602006923 (3)ref|XP_004237181.1|3e-15PREDICTED: autophagy-related protein 9 [Solanum lycopersicum]
JMFN019F07Sequence617006923 (3)ref|XP_004237181.1|3e-15PREDICTED: autophagy-related protein 9 [Solanum lycopersicum]
JMSF034L15Sequence686003769 (2)gb|AGH30270.1|7e-52autophagy-related protein 9, partial [Nicotiana benthamiana]725006923 (3)ref|XP_004237181.1|9e-24PREDICTED: autophagy-related protein 9 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034L15+ AAAGCAGCGTC
                      ____________________________________________________________
consensus AAAGCAGCGTC
 
. : . : . : . : . : . :
rJMSF034L15+ CTGCAGCAACACGACAACAACAACATGGCACATTCCCCAAAGCGGGACTGGTGGGCTAGA
                      ____________________________________________________________
consensus CTGCAGCAACACGACAACAACAACATGGCACATTCCCCAAAGCGGGACTGGTGGGCTAGA
 
. : . : . : . : . : . :
JMFN019F07- CCAGACGAGCTTTCTCGAGCCTTCTTCCGCTTTCTTC
rJMSF034L15+ AGTAGACCGCAAGTTCGGGATCCCCAGACGAGCTTTCTCGAGCCTTCTTCCGCTTTCTTC
rJMFF041J06+ TC
                      ____________________________________________________________
consensus AGTAGACCGCAAGTTCGGGATCCCCAGACGAGCTTTCTCGAGCCTTCTTCCGCTTTCTTC
 
. : . : . : . : . : . :
JMFN019F07- AACCGCGGTGGTACTCAGGCAAGCTTTCTCGAACCTCCTCCTTTCATTAACCGTGGCCCT
rJMSF034L15+ AACCGCGGTGGTACTCAGGCAAGCTTTCTCGAACCTCCTCCTTTCATTAACCGTGGCCCT
rJMFF041J06+ AACCGCGGTGGTACTCAGGCAAGCTTTCTCGAACCTCCTCCTTTCATTAACCGTGGCCCT
                      ____________________________________________________________
consensus AACCGCGGTGGTACTCAGGCAAGCTTTCTCGAACCTCCTCCTTTCATTAACCGTGGCCCT
 
. : . : . : . : . : . :
JMFN019F07- CAGACAAGCTTTCTCGAGCCTACTTCTTCCACCCACCATCCTCAGACAAGCTTTCTCGAG
rJMSF034L15+ CAGACAAGCTTTCTCGAGCCTACTTCTTCCACCCACCATCCTCAGACAAGCTTTCTCGAG
rJMFF041J06+ CAGACAAGCTTTCTCGAGCCTACTTCTTCCACCCACCATCCTCAGACAAGCTTTCTCGAG
                      ____________________________________________________________
consensus CAGACAAGCTTTCTCGAGCCTACTTCTTCCACCCACCATCCTCAGACAAGCTTTCTCGAG
 
. : . : . : . : . : . :
JMFN019F07- CCGTCAACTCTCAACCGCCATCCCCAGGCGAGCTTCGTTGAGCCCCCGACGACCTCCGAC
rJMSF034L15+ CCGTCAACTCTCAACCGCCATCCCCAGGCGAGCTTCGTTGAGCCCCCGACGACCTCCGAC
rJMFF041J06+ CCGTCAACTCTCAACCGCCATCCCCAGGCGAGCTTCGTTGAGCCCCCGACGACCTCCGAC
                      ____________________________________________________________
consensus CCGTCAACTCTCAACCGCCATCCCCAGGCGAGCTTCGTTGAGCCCCCGACGACCTCCGAC
 
. : . : . : . : . : . :
JMFN019F07- CGATATCCTCCTCGAGATAATTATGATACCTCCTCTGACAGAAGTGTAGATGAACAGGAA
rJMSF034L15+ CGATATCCTCCTCGAGATAATTATGATACCTCCTCTGACAGAAGTGTAGATGAACAGGAA
rJMFF041J06+ CGATATCCTCCTCGAGATAATTATGATACCTCCTCTGACAGAAGTGTAGATGAACAGGAA
                      ____________________________________________________________
consensus CGATATCCTCCTCGAGATAATTATGATACCTCCTCTGACAGAAGTGTAGATGAACAGGAA
 
. : . : . : . : . : . :
JMFN019F07- AACCTGGATTTGAGGAACTCGAATAGGTTGTTGACACGAACGTTCTTCATGGATGAATCG
rJMSF034L15+ AACCTGGATTTGAGGAACTCGAATAGGTTGTTGACACGAACGTTCTTCATGGATGAATCG
rJMFF041J06+ AACCTGGATTTGAGGAACTCGAATAGGTTGTTGACACGAACGTTCTTCATGGATGAATCG
                      ____________________________________________________________
consensus AACCTGGATTTGAGGAACTCGAATAGGTTGTTGACACGAACGTTCTTCATGGATGAATCG
 
. : . : . : . : . : . :
JMFN019F07- GGGGGAGACTTTAACCTTCCTTTCGATGATATTTATGGAAGGCGTTCGGCAAGCTCCAGT
rJMSF034L15+ GGGGGAGACTTTAACCTTCCTTTCGATGATATTTATGGAAGGCGTTCGGCAAGCTCCAGT
rJMFF041J06+ GGGGGAGACTTTAACCTTCCTTTCGATGATATTTATGGAAGGCGTTCGGCAAGCTCCAGT
                      ____________________________________________________________
consensus GGGGGAGACTTTAACCTTCCTTTCGATGATATTTATGGAAGGCGTTCGGCAAGCTCCAGT
 
. : . : . : . : . : . :
JMFN019F07- AGGAGGAGCTCAGATGATGCTGCAGATCTCGTGTGATTGCGTGGCGTGGCTTTTCGTTTT
rJMSF034L15+ AGGAGGAGCTCAGATGATGCTGCAGATCTCGTGTGATTGCGTGGCGTGGCTTTTCGTTTT
rJMFF041J06+ AGGAGGAGCTCAGATGATGCTGCAGATCTCGTGTGATTGCGTGGCGTGGCTTTTCGTTTT
                      ____________________________________________________________
consensus AGGAGGAGCTCAGATGATGCTGCAGATCTCGTGTGATTGCGTGGCGTGGCTTTTCGTTTT
 
. : . : . : . : . : . :
JMFN019F07- TCTAACAGGAAGTGGAACGTTCTTTCCTGTACATAAAATTAGTTTAAAGGCTCTTTGGGT
rJMSF034L15+ TCTAACAGGAAGTGGAACGTTCTTTCCTGTACATAAAATTAGTTTAAAGGCTCTTTGGGT
rJMFF041J06+ TCTAACAGGAAGTGGAACGTTCTTTCCTGTACATAAAATTAGTTTAAAGGCTCTTTGGGT
                      ____________________________________________________________
consensus TCTAACAGGAAGTGGAACGTTCTTTCCTGTACATAAAATTAGTTTAAAGGCTCTTTGGGT
 
. : . : . : . : . : . :
JMFN019F07- TGATTATTTGGACAGTGATTTAGATGCCCAGTTCAGTCTCTAATCCTCTGATAAAGTAAA
rJMSF034L15+ TGATTATTTGGACAGTGATTTAGATGCCCAGTTCAGTCTCTAATCCTCTGATAAAGTAAA
rJMFF041J06+ TGATTATTTGGACAGTGATTTAGATGCCCAGTTCAGTCTCTAATCCTCTGATAAAGTAAA
                      ____________________________________________________________
consensus TGATTATTTGGACAGTGATTTAGATGCCCAGTTCAGTCTCTAATCCTCTGATAAAGTAAA
 
. : . : . : . : . : . :
JMFN019F07- CACGTACTATAAATTTGATTGATTATCATTGTGGTCAGGT
rJMSF034L15+ CACGTACTATAAATTTGATTGATTATCATTGTGGTCAGGTCCAATGAAATATT
rJMFF041J06+ CACGTACTATAAATTTGATTGATTATCATTGTGGTCAGGTCCAATGAAATATTTGTACAT
                      ____________________________________________________________
consensus CACGTACTATAAATTTGATTGATTATCATTGTGGTCAGGTCCAATGAAATATTTGTACAT