clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF019E23 | Sequence | 552 | 003254 (3) | ref|XP_009602498.1| | 213 | PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis] | 713 | 006921 (3) | gb|KJB54312.1| | 6e-82 | hypothetical protein B456_009G028600 [Gossypium raimondii] |
JMFF041G04 | Sequence | 631 | 003254 (3) | ref|XP_009602498.1| | 265 | PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis] | 615 | 006921 (3) | ref|XP_006353504.1| | 116 | PREDICTED: uncharacterized protein LOC102579879 [Solanum tuberosum] |
JMFF042O01 | Sequence | 646 | 003254 (3) | ref|XP_009602498.1| | 278 | PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis] | 620 | 006921 (3) | ref|XP_006353504.1| | 116 | PREDICTED: uncharacterized protein LOC102579879 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF019E23+ GTCGCCGCAG
____________________________________________________________
consensus GTCGCCGCAG
. : . : . : . : . : . :
rJMFF019E23+ CTTCAATGATAACTCCGTTCGTTCCATCCTCCCCAGGATCCGACCGCGTTTCCCGATCGA
____________________________________________________________
consensus CTTCAATGATAACTCCGTTCGTTCCATCCTCCCCAGGATCCGACCGCGTTTCCCGATCGA
. : . : . : . : . : . :
rJMFF019E23+ ATCCCGGCGCGTGGCTGATCCTCCGGCCGAACGGCGGCTCCGTGAGCAGCTGGAAGCCGT
____________________________________________________________
consensus ATCCCGGCGCGTGGCTGATCCTCCGGCCGAACGGCGGCTCCGTGAGCAGCTGGAAGCCGT
. : . : . : . : . : . :
rJMFF019E23+ GGGGGCGGCTGGAAGCGTGGCGGGAGAGAGGGCCGGTGGACGGGCTGGGCTACAAATTCG
____________________________________________________________
consensus GGGGGCGGCTGGAAGCGTGGCGGGAGAGAGGGCCGGTGGACGGGCTGGGCTACAAATTCG
. : . : . : . : . : . :
rJMFF019E23+ AGCTGGTTTCGGATTCGGGTTTGAACAACGGAGCGCCCATTGCAGAGGGCNCCATGAACG
____________________________________________________________
consensus AGCTGGTTTCGGATTCGGGTTTGAACAACGGAGCGCCCATTGCAGAGGGCNCCATGAACG
. : . : . : . : . : . :
rJMFF019E23+ TGAAGAAAGGCGGGGTTTTNTGCATAGACAACGCGGCGGCGAGGAAACAGTCGCCGGCGA
rJMFF042O01+ AAACAGTCGCCGGCGA
rJMFF041G04+ AAACAGTCGCCGGCGA
____________________________________________________________
consensus TGAAGAAAGGCGGGGTTTTNTGCATAGACAACGCGGCGGCGAGGAAACAGTCGCCGGCGA
. : . : . : . : . : . :
rJMFF019E23+ TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
rJMFF042O01+ TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
rJMFF041G04+ TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
____________________________________________________________
consensus TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
. : . : . : . : . : . :
rJMFF019E23+ TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTNTNTTTGTTGCGGTTT
rJMFF042O01+ TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTCTCTTTGTTGCGGTTT
rJMFF041G04+ TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTCTCTTTGTTGCGGTTT
____________________________________________________________
consensus TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTCTCTTTGTTGCGGTTT
. : . : . : . : . : . :
rJMFF019E23+ CAGCCGCCATTGATNTTAGCATGGATGCTTGCAAGCTTTTNTCCCAGAAACTCAGGAAGG
rJMFF042O01+ CAGCCGCCATTGATCTTAGCATGGATGCTTGCAAGCTTTTCTCCCAGAAACTCAGGAAGG
rJMFF041G04+ CAGCCGCCATTGATCTTAGCATGGATGCTTGCAAGCTTTTCTCCCAGAAACTCAGGAAGG
____________________________________________________________
consensus CAGCCGCCATTGATCTTAGCATGGATGCTTGCAAGCTTTTCTCCCAGAAACTCAGGAAGG
. : . : . : . : . : . :
rJMFF019E23+ AGCTTTGCCATGATCATGACCATCACTACTNTTTNTNTTAAACCTTTATTCATCATNTTC
rJMFF042O01+ AGCTTTGCCATGATCATGACCATCACTACTCTTTCTCTTAAACCTTTATTCATCATCTTC
rJMFF041G04+ AGCTTTGCCATGATCATGACCATCACTACTCTTTCTCTTAAACCTTTATTCATCATCTTC
____________________________________________________________
consensus AGCTTTGCCATGATCATGACCATCACTACTCTTTCTCTTAAACCTTTATTCATCATCTTC
. : . : . : . : . : . :
rJMFF019E23+ AAAAAAAATATTTTTGGCCATTGGTNTGAGCATGAAGATGCACAATACAAA-TTTTTTTT
rJMFF042O01+ AAAAAAAATATTTTTGGCCATTGGTCTGAGCATGAAGATGCACAATACAAATTTTTTTTT
rJMFF041G04+ AAAAAAAATATTTTTGGCCATTGGTCTGAGCATGAAGGTGCACAATACAAA-TTTTTTTT
____________________________________________________________
consensus AAAAAAAATATTTTTGGCCATTGGTCTGAGCATGAAGATGCACAATACAAA-TTTTTTTT
. : . : . : . : . : . :
rJMFF019E23+ TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
rJMFF042O01+ TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
rJMFF041G04+ TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
____________________________________________________________
consensus TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
. : . : . : . : . : . :
rJMFF019E23+ GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTT
rJMFF042O01+ GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTTTGAGAAATATTATTTCTTCTTCT
rJMFF041G04+ GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTTTGAGAAATATTATTTCTTCTTCT
____________________________________________________________
consensus GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTTTGAGAAATATTATTTCTTCTTCT
. : . : . : . : . : . :
rJMFF042O01+ AAATACTGTCTACTGAACTATTGAGCTAAGTTCGTGTGAACGAGTGTGACCTGTATTGAT
rJMFF041G04+ AAATACTGTCTACTGAACTATTGAGCTAAGTTCGTGTGAACGAGTGTGACCTGTATTGAT
____________________________________________________________
consensus AAATACTGTCTACTGAACTATTGAGCTAAGTTCGTGTGAACGAGTGTGACCTGTATTGAT
. : . : . : . : . : . :
rJMFF042O01+ CTGATGAGTGAATTTTTTAAAATTTTTTTTTGGGCTTAGCTTCAATGTACCATAAATATG
rJMFF041G04+ CTGATGAGTGAATTTTTTAAAATTTTTTTTTGGGCTTAGCTTCAATGTACCATAAATATG
____________________________________________________________
consensus CTGATGAGTGAATTTTTTAAAATTTTTTTTTGGGCTTAGCTTCAATGTACCATAAATATG
. : . : . : . : . : . :
rJMFF042O01+ AAGTTTGTAACAGTTTGTGTGTTACAGATTGATATTGTACAGACAAATTAAACAGTGAGC
rJMFF041G04+ AAGTTTGTAACAGTTTGTGTGTTACAGATTGATATTGTACAGACAAATTAAACAGTGAGC
____________________________________________________________
consensus AAGTTTGTAACAGTTTGTGTGTTACAGATTGATATTGTACAGACAAATTAAACAGTGAGC