clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF031D06 | Sequence | 539 | 010668 (4) | ref|XP_007040361.1| | 1e-66 | Calcineurin-like metallo-phosphoesterase superfamily protein [Theobroma cacao] | 779 | 006918 (3) | gb|KDO76354.1| | 8e-74 | hypothetical protein CISIN_1g019125mg [Citrus sinensis] |
JMFF040L14 | Sequence | 475 | 010668 (4) | ref|XP_007040361.1| | 2e-51 | Calcineurin-like metallo-phosphoesterase superfamily protein [Theobroma cacao] | 736 | 006918 (3) | gb|KDO76354.1| | 1e-56 | hypothetical protein CISIN_1g019125mg [Citrus sinensis] |
JMSF019O03 | Sequence | 459 | 010668 (4) | ref|XP_007040361.1| | 6e-38 | Calcineurin-like metallo-phosphoesterase superfamily protein [Theobroma cacao] | 798 | 006918 (3) | gb|KDO76354.1| | 3e-84 | hypothetical protein CISIN_1g019125mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF019O03+ TAGGAATATACCCCGACCTATAGATGTACCAGATCAGGGCCTCCT
____________________________________________________________
consensus TAGGAATATACCCCGACCTATAGATGTACCAGATCAGGGCCTCCT
. : . : . : . : . : . :
rJMSF019O03+ ATGTGACTTGCTGTGGGCTGATCCTGACAGAGATATTGAAGGATGGGGAGAGAATGATAG
rJMFF031D06+ ATGTGACTTGCTGTGGGCTGATCCTGACAGAGATATTGAAGGATGGGGAGAGAATGATAG
rJMFF040L14+ G
____________________________________________________________
consensus ATGTGACTTGCTGTGGGCTGATCCTGACAGAGATATTGAAGGATGGGGAGAGAATGATAG
. : . : . : . : . : . :
rJMSF019O03+ GGGAGTATCATATACATTTGGAGCTGACAAGGTTGCTGAATTTCTTGAGGAGCATGACCT
rJMFF031D06+ GGGAGTATCATATACATTTGGAGCTGACAAGGTTGCTGAATTTCTTGAGGAGCATGACCT
rJMFF040L14+ GGGAGTATCATATACATTTGGAGCTGACAAGGTTGCTGAATTTCTTGAGGAGCATGACCT
____________________________________________________________
consensus GGGAGTATCATATACATTTGGAGCTGACAAGGTTGCTGAATTTCTTGAGGAGCATGACCT
. : . : . : . : . : . :
rJMSF019O03+ TGATCTCGTCTGCCGAGCTCACCAGGTTGTGGAAGACGGATACGAGTTCTTTTCAAACCG
rJMFF031D06+ TGATCTCGTCTGCCGAGCTCACCAGGTTGTGGAAGACGGATACGAGTTCTTTTCAAACCG
rJMFF040L14+ TGATCTCGTCTGCCGAGCTCACCAGGTTGTGGAAGACGGATACGAGTTCTTTTCAAACCG
____________________________________________________________
consensus TGATCTCGTCTGCCGAGCTCACCAGGTTGTGGAAGACGGATACGAGTTCTTTTCAAACCG
. : . : . : . : . : . :
rJMSF019O03+ ACAGTTGGTAACTATATTTTCTGCACCAAATTACTGTGGTGAGTTTGACAATGCTGGTGC
rJMFF031D06+ ACAGTTGGTAACTATATTTTCTGCACCAAATTACTGTGGTGAGTTTGACAATGCTGGTGC
rJMFF040L14+ ACAGTTGGTAACTATATTTTCTGCACCAAATTACTGTGGTGAGTTTGACAATGCTGGTGC
____________________________________________________________
consensus ACAGTTGGTAACTATATTTTCTGCACCAAATTACTGTGGTGAGTTTGACAATGCTGGTGC
. : . : . : . : . : . :
rJMSF019O03+ GATGATGAGTGTAGACGACACATTAACATGTTCTTTCCAAATCTTAAAGGCCTCTGAGAA
rJMFF031D06+ GATGATGAGTGTAGACGACACATTGACATGTTCTTTCCAAATCTTAAAGGCCTCTGAGAA
rJMFF040L14+ GATGATGAGTGTAGACGACACATTGACATGTTCTTTCCAAATCTTAAAGGCCTCTGAGAA
____________________________________________________________
consensus GATGATGAGTGTAGACGACACATTGACATGTTCTTTCCAAATCTTAAAGGCCTCTGAGAA
. : . : . : . : . : . :
rJMSF019O03+ GAAAGGAAAATCTGGGTTTGGCAATATGCAGAGGCCAGCAACACCACCTCATAAGGGTGC
rJMFF031D06+ GAAAGGAAAATCTGGGTTTGGCAATATGCAGAGGCCAGCAACACCACCTCATAAGGGTGC
rJMFF040L14+ GAAAGGAAAATCTGGGTTTGGCAATATGCAGAGGCCAGCAACACCACCTCATAAGGGTGC
____________________________________________________________
consensus GAAAGGAAAATCTGGGTTTGGCAATATGCAGAGGCCAGCAACACCACCTCATAAGGGTGC
. : . : . : . : . : . :
rJMSF019O03+ CAAGGGCTAAATGGTGTGCCAACAATTACTTTCTGTCTGGTCAAGATTGCTACGCGGTGA
rJMFF031D06+ CAAGGGCTAAATGGTGTGCCAACAATTACTTTCTGTCTGGTCAAGATTGCTACGCGGTGA
rJMFF040L14+ CAAGGGCTAAATGGTGTGCCAACAATTACTTTCTGTCTGGTCAAGATTGCTACGCGGTGA
____________________________________________________________
consensus CAAGGGCTAAATGGTGTGCCAACAATTACTTTCTGTCTGGTCAAGATTGCTACGCGGTGA
. : . : . : . : . : . :
rJMSF019O03+ GGCAACTACACCTAATTTGTCTACTTAAAACTTGTGTTCCCAAAATCAGTTTTGCATCTC
rJMFF031D06+ GGCAACTACACCTAATTTGTCTACTTAAAACTTGTGTTCCCAAAATCAGTTTTGCATCTC
rJMFF040L14+ GGCAACTACACCTAATTTGTCTACTTAAAACTTGTGTTCCCAAAATCAGTTTTGCATCTC
____________________________________________________________
consensus GGCAACTACACCTAATTTGTCTACTTAAAACTTGTGTTCCCAAAATCAGTTTTGCATCTC
. : . : . : . : . : . :
rJMSF019O03+ ACAATCTATGGATTGGGGAGAGAAGCTCGATTGCCCATGGTCCTATATTTTATGTTCCCA
rJMFF031D06+ ACAATCTATGGATTGGGGAGAGAAGCTCGATTGCCCATGGTCCTATATTTTATGTTCCCA
rJMFF040L14+ ACAATCTATGGATTGGGGAGAGAAGCTCGATTGCCCATGGTCCTATATTTTATGTTCCCA
____________________________________________________________
consensus ACAATCTATGGATTGGGGAGAGAAGCTCGATTGCCCATGGTCCTATATTTTATGTTCCCA
. : . : . : . : . : . :
rJMSF019O03+ CAAAAGGGTGTAGGGATCAACTAGTCCCAGATGATGCGACGAAAATGCTGTTCACCTATG
rJMFF031D06+ CAAAAGGGTGTAGGGATCAACTAGTCCCAGATGATGCGACGAAAATGCTGTTCACCTATG
rJMFF040L14+ CAAAAGGGTGTAGGGATCAACTAGTCCCAGATGATGCGACGAAAATGCTGTTCACCTATG
____________________________________________________________
consensus CAAAAGGGTGTAGGGATCAACTAGTCCCAGATGATGCGACGAAAATGCTGTTCACCTATG
. : . : . : . : . : . :
rJMSF019O03+ TAAAACTAGTCTTTTTTAATGTATAATGCTGCAACACAAACTTCCAAAGGGATTTTGTTT
rJMFF031D06+ TAAAACTAGTCTTTTTTAATGTATAATGCTGCAACACAAACTTCCAAAGGGATTTTGTTT
rJMFF040L14+ TAAAACTAGTCTTTTTTAATGTATAATGCTGCAACACAAACTTCCAAAGGGATTTTGTTT
____________________________________________________________
consensus TAAAACTAGTCTTTTTTAATGTATAATGCTGCAACACAAACTTCCAAAGGGATTTTGTTT
. : . : . : . : . : . :
rJMSF019O03+ CTTTGTTGTAGTACTAGTGCTTCCATTTTCTTGTGAAACAATTAGACTAAATCTGAAGAC
rJMFF031D06+ CTTTGTTGTAGTACTAGTGCTTCCATTTTCTTGTGAAACAATTAGACTAAATCTGAAGAC
rJMFF040L14+ CTTTGTTGTAGTACTAGTGCTTCCATTTTCTTGTGAAACAATTAGACTAAATCTGAAGAC
____________________________________________________________
consensus CTTTGTTGTAGTACTAGTGCTTCCATTTTCTTGTGAAACAATTAGACTAAATCTGAAGAC
. : . : . : . : . : . :
rJMSF019O03+ TAATGCGAGTTGGCTTTAGTTAACTGCACACAT
rJMFF031D06+ TAATGCGAGTTGGCTTTAGTTAACTGCACACATTGTAATTTTCTCTGTCAAAACTACAT
rJMFF040L14+ TAATGCGAGTTGGCTTTAGTTAACTGCACACATTGTAATTTTCTCTGTCAAAACTACATT
____________________________________________________________
consensus TAATGCGAGTTGGCTTTAGTTAACTGCACACATTGTAATTTTCTCTGTCAAAACTACATT