Contig 006905:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037J07Sequence537009370 (3)ref|XP_009771803.1|1e-61PREDICTED: 5-epi-aristolochene synthase-like, partial [Nicotiana sylvestris]766006905 (3)ref|XP_009766331.1|6e-70PREDICTED: 5-epi-aristolochene synthase 2-like [Nicotiana sylvestris]
JMSF027G11Sequence695009370 (3)ref|XP_009771803.1|2e-61PREDICTED: 5-epi-aristolochene synthase-like, partial [Nicotiana sylvestris]818006905 (3)ref|XP_009766331.1|6e-81PREDICTED: 5-epi-aristolochene synthase 2-like [Nicotiana sylvestris]
JMSF034A08Sequence693009370 (3)ref|XP_009771803.1|7e-61PREDICTED: 5-epi-aristolochene synthase-like, partial [Nicotiana sylvestris]775006905 (3)ref|XP_009766331.1|8e-81PREDICTED: 5-epi-aristolochene synthase 2-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027G11+ TGCCATATAGATG
                      ____________________________________________________________
consensus TGCCATATAGATG
 
. : . : . : . : . : . :
rJMSF034A08+ CCTGATGNATTAGAGATTATACCGATGCCATACAAAAGT
rJMSF027G11+ ACACATTGATTCTTTGGCACCCCTGATGAATTAGAGATTATACCGATGCCATACAAAAGT
                      ____________________________________________________________
consensus ACACATTGATTCTTTGGCACCCCTGATGAATTAGAGATTATACCGATGCCATACAAAAGT
 
. : . : . : . : . : . :
rJMSF034A08+ GGGATATAAACCAAATGAATCGTCTTCCAGATTATATGAAGATAAGCTATAAAGCTCTTA
rJMSF027G11+ GGGATATAAACCAAATGAATCGTCTTCCAGATTATATGAAGATAAGCTATAAAGCTCTTA
                      ____________________________________________________________
consensus GGGATATAAACCAAATGAATCGTCTTCCAGATTATATGAAGATAAGCTATAAAGCTCTTA
 
. : . : . : . : . : . :
rJMSF034A08+ TAAATCTTTATGATGAGGAGTTCAATAAAGAACTATCTGAAGAAGAAAGAATTTTTGCAC
rJMSF027G11+ TAAATCTTTATGATGAGGAGTTCAATAAAGAACTATCTGAAGAAGAAAGAATTTTTGCAC
rJMFF037J07+ GATGAGGATTTCAATAAAGAACTATGTGAAGAAGGAAGAATTTTTGCAC
                      ____________________________________________________________
consensus TAAATCTTTATGATGAGGAGTTCAATAAAGAACTATCTGAAGAAGAAAGAATTTTTGCAC
 
. : . : . : . : . : . :
rJMSF034A08+ TTTATAATGCAAAAGAGAGAATGAAAGAACTTGTGAGGGCTTATTACACGGAATTAAAAT
rJMSF027G11+ TTTATAATGCAAAAGAGAGAATGAAAGAACTTGTGAGGGCTTATTACACGGAATTAAAAT
rJMFF037J07+ TTTATTATGCAAAAGAGAGAATGAAAGAACTTGTCAGGGCTTATTACACGGAATTAAAAT
                      ____________________________________________________________
consensus TTTATAATGCAAAAGAGAGAATGAAAGAACTTGTGAGGGCTTATTACACGGAATTAAAAT
 
. : . : . : . : . : . :
rJMSF034A08+ GGTCTACTAAAGGATGCATGCCACCACTTGTTGAGTATCTAAGGAATTATGGTTTAGCTA
rJMSF027G11+ GGTCTACTAAAGGATGCATGCCACCACTTGTTGAGTATCTAAGGAATTATGGTTTAGCTA
rJMFF037J07+ GGTCTACTAAAGGATGCATGCCACCATTTGTTGAGTATCTAAACAAT---GGTCTAGCTA
                      ____________________________________________________________
consensus GGTCTACTAAAGGATGCATGCCACCACTTGTTGAGTATCTAAGGAATTATGGTTTAGCTA
 
. : . : . : . : . : . :
rJMSF034A08+ GTAGCACCATCTACGTGGTCATCACAACTTTTTTACTTGGCCAGAAACCCGTTACAAGAG
rJMSF027G11+ GTAGCACCATCTACGTGGTCATCACAACTTTTTTACTTGGCCAGAAACCCGTTACAAGAG
rJMFF037J07+ GTAGCACCGTCTACTTGCTCATCACAACTTTTTTACTTGGCATGAAATCCGTTACAAGAG
                      ____________________________________________________________
consensus GTAGCACCATCTACGTGGTCATCACAACTTTTTTACTTGGCCAGAAACCCGTTACAAGAG
 
. : . : . : . : . : . :
rJMSF034A08+ AAGCATTTGAATGGGTGAATCAAAACCCTAGAATTGTTGAGGCCAATGCGATATTGGCTC
rJMSF027G11+ AAGCATTTGAATGGGTGAATCAAAACCCTAGAATTGTTGAGGCCAATGCGATATTGGCTC
rJMFF037J07+ AAGCATTTGAATGGGTGAATCAAAACCCTAGAATTGTTGAGGCCAATGCGATATTGGGTC
                      ____________________________________________________________
consensus AAGCATTTGAATGGGTGAATCAAAACCCTAGAATTGTTGAGGCCAATGCGATATTGGCTC
 
. : . : . : . : . : . :
rJMSF034A08+ GGCTTATTAATGACGTAGCTTCCTATGAGCGTGAGAAAAGCAACAGCCTATAT------A
rJMSF027G11+ GGCTTATTAATGACGTAGCTTCCTATGAGCGTGAGAAAAGCAACAGCCTATAT------A
rJMFF037J07+ GGCTTATTAATGACATAGGCTCCTATGAGCGTGAGAAAAGCAGCAGCCTAATTGCAATAA
                      ____________________________________________________________
consensus GGCTTATTAATGACGTAGCTTCCTATGAGCGTGAGAAAAGCAACAGCCTATAT------A
 
. : . : . : . : . : . :
rJMSF034A08+ CAGGGATTGATTGTTACATGAGTGATTATGGCGTATCTGTTGATGAAGCAATGCACAAGC
rJMSF027G11+ CAGGGATTGATTGTTACATGAGTGATTATGGCGTATCTGTTGATGAAGCAATGCACAAGC
rJMFF037J07+ CAGGGATTGATTGTTACATGAGTGATTATGGCGTATCTGTTCATGAAGCAATGGACAAGC
                      ____________________________________________________________
consensus CAGGGATTGATTGTTACATGAGTGATTATGGCGTATCTGTTGATGAAGCAATGCACAAGC
 
. : . : . : . : . : . :
rJMSF034A08+ TCCAAGAAATGGTTAATAATGCCTGGAAAGATATCAATGAAGATATTCTTCAACCAACTT
rJMSF027G11+ TCCAAGAAATGGTTAATAATGCCTGGAAAGATATCAATGAAGATATTCTTCAACCAACTT
rJMFF037J07+ TCAAAGAAATGATTAATAATGCGTGGAAAGATATCAATGAAGATATTCTTCAACCAACTT
                      ____________________________________________________________
consensus TCCAAGAAATGGTTAATAATGCCTGGAAAGATATCAATGAAGATATTCTTCAACCAACTT
 
. : . : . : . : . : . :
rJMSF034A08+ T
rJMSF027G11+ T
rJMFF037J07+ TTCCAATCTCTAGAGAGATTCTTATGTGTCTTCTCAACATTGCTCGTGCGGTTAGTGTGT
                      ____________________________________________________________
consensus TTCCAATCTCTAGAGAGATTCTTATGTGTCTTCTCAACATTGCTCGTGCGGTTAGTGTGT
 
. : . : . : . : . : . :
rJMFF037J07+ TGTATATGCAAAATCAAGATGGATTTACTAACTCTGAAAAAGTCATGAAGCCTTATATGA
                      ____________________________________________________________
consensus TGTATATGCAAAATCAAGATGGATTTACTAACTCTGAAAAAGTCATGAAGCCTTATATGA
 
. : . : . : . : . : . :
rJMFF037J07+ ATGCTCTTTTTGTGGAATCCTTTGAAGTCTAAGTTGCCGTACGTGGTTTCTTTGGTCTTT
                      ____________________________________________________________
consensus ATGCTCTTTTTGTGGAATCCTTTGAAGTCTAAGTTGCCGTACGTGGTTTCTTTGGTCTTT
 
. : . : . : . : . : . :
rJMFF037J07+ GTATTGTTTGTGTGTGTTTTCCCTTTTTAATGTATTCTGCAGTTTGAATTGTAATAATGT
                      ____________________________________________________________
consensus GTATTGTTTGTGTGTGTTTTCCCTTTTTAATGTATTCTGCAGTTTGAATTGTAATAATGT
 
. : . : . : . : . : . :
rJMFF037J07+ GAAGGGGAGAGACAAGCCTTGTACGCATCATACATCCATATATCCTTTGTGACAATAAAG
                      ____________________________________________________________
consensus GAAGGGGAGAGACAAGCCTTGTACGCATCATACATCCATATATCCTTTGTGACAATAAAG