Contig 006899:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035E10Sequence583006899 (2)ref|XP_002524111.1|3e-122d-lactate dehydrogenase, putative [Ricinus communis] gb|EEF38321.1| d-lactate de732006899 (2)ref|XP_006362299.1|3e-130PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial-like [Solanum tu

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF035E10- CTTGATGATTGGAAGTGAAGGAA
                      ____________________________________________________________
consensus CTTGATGATTGGAAGTGAAGGAA
 
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JMFF035E10- CGCTGGGAGTTATCACTGAAGTTACTTTGCGATTGCAGAAAATCCCACAATCGTCAGTGG
                      ____________________________________________________________
consensus CGCTGGGAGTTATCACTGAAGTTACTTTGCGATTGCAGAAAATCCCACAATCGTCAGTGG
 
. : . : . : . : . : . :
JMFF035E10- TTGCAATGTGCAACTTCCCGACAATTAAGGATGCAGCAGACGTTGCCATTGCCACTATGC
                      ____________________________________________________________
consensus TTGCAATGTGCAACTTCCCGACAATTAAGGATGCAGCAGACGTTGCCATTGCCACTATGC
 
. : . : . : . : . : . :
JMFF035E10- TTACTGGGATACAGGTCTCGAGAGTGGAACTCCTGGATGAAGTTCAAGTGCGAGCAATTA
rJMFF035E10+ TGCGAGCAATTA
                      ____________________________________________________________
consensus TTACTGGGATACAGGTCTCGAGAGTGGAACTCCTGGATGAAGTTCAAGTGCGAGCAATTA
 
. : . : . : . : . : . :
JMFF035E10- ATTATGCGAACGGGAAAAATTTGCCGGAAGTTCCAACTCTAATGTTTGAATTTATAGGCA
rJMFF035E10+ ATTATGCGANCGGGAAAAATTTGCCGGAAGTTCCAACTCTAATGTTNGAATTTATAGGCA
                      ____________________________________________________________
consensus ATTATGCGAACGGGAAAAATTTGCCGGAAGTTCCAACTCTAATGTTTGAATTTATAGGCA
 
. : . : . : . : . : . :
JMFF035E10- CAGAAGCGTATGCACGTGAGCAAACAAAAATTGTTCAGAAGATAGCTTCTGAGCACAGGG
rJMFF035E10+ CAGAAGCGTATGCACGTGAGCAAACAAAAATTGTTCAGAAGATAGCTTCTGAGCACAGGG
                      ____________________________________________________________
consensus CAGAAGCGTATGCACGTGAGCAAACAAAAATTGTTCAGAAGATAGCTTCTGAGCACAGGG
 
. : . : . : . : . : . :
JMFF035E10- GCACGGATTTCGTCTTTGCAGAAGCTCCTGAAGAGAAAAAGGAACTTTGGAAGATAAGGA
rJMFF035E10+ GCACGGATTTCGTCTTTGCAGAAGCTCCTGAAGAGAAAAAGGAACTTTGGAAGATAAGGA
                      ____________________________________________________________
consensus GCACGGATTTCGTCTTTGCAGAAGCTCCTGAAGAGAAAAAGGAACTTTGGAAGATAAGGA
 
. : . : . : . : . : . :
JMFF035E10- AGGAGGCGCTTTGGGCTTGCTTTGCTATGGAACCTAATTTCGAAGCAATGATAACGGATG
rJMFF035E10+ AGGAGGCGCTTTGGGCTTGCTTTGCTATGGAACCTAATTTCGAAGCAATGATAACGGATG
                      ____________________________________________________________
consensus AGGAGGCGCTTTGGGCTTGCTTTGCTATGGAACCTAATTTCGAAGCAATGATAACGGATG
 
. : . : . : . : . : . :
JMFF035E10- TTTGCGTTCCTCTATCGCACCTTGCAGAACTAATCTCCCGATCAAAACAAGAGCTGGATG
rJMFF035E10+ TTTGCGTTCCTCTATCGCACCTTGCAGAACTAATCTCCCGATCAAAACAAGAGCTGGATG
                      ____________________________________________________________
consensus TTTGCGTTCCTCTATCGCACCTTGCAGAACTAATCTCCCGATCAAAACAAGAGCTGGATG
 
. : . : . : . : . : . :
JMFF035E10- CCTCGCCACTAGTATGCACAGTTATCGCTCATGCTGGTGATGGGAACTTCCACACGGTCA
rJMFF035E10+ CCTCGCCACTAGTATGCACAGTTATCGCTCATGCTGGTGATGGGAACTTCCACACGGTCA
                      ____________________________________________________________
consensus CCTCGCCACTAGTATGCACAGTTATCGCTCATGCTGGTGATGGGAACTTCCACACGGTCA
 
. : . : . : . : . : . :
JMFF035E10- TACTTTTTGATCCCGCCCAA
rJMFF035E10+ TACTTTTTGATCCCGCCCAAGAGAGCCAACGTAAAGAAGCCGAGAGGCTAAACCACTTCA
                      ____________________________________________________________
consensus TACTTTTTGATCCCGCCCAAGAGAGCCAACGTAAAGAAGCCGAGAGGCTAAACCACTTCA
 
. : . : . : . : . : . :
rJMFF035E10+ TGGTCCACACCGCTCTATCCATGGAAGGCACGTGCACCGGAGAACATGGCGTTGGTACTG
                      ____________________________________________________________
consensus TGGTCCACACCGCTCTATCCATGGAAGGCACGTGCACCGGAGAACATGGCGTTGGTACTG
 
. : . : . : . : . : . :
rJMFF035E10+ GGAAGATGAAGTACCTTGAGAAAGAACTGGGAATGGAGAATCTGCAAACAATGAAGAAGA
                      ____________________________________________________________
consensus GGAAGATGAAGTACCTTGAGAAAGAACTGGGAATGGAGAATCTGCAAACAATGAAGAAGA
 
. : . : . : . : . : . :
rJMFF035E10+ TTAAAGATGCTTTGGATCCCAACAATATCATGAATCCAGGAAAGCTCATCCCCCCTCATG
                      ____________________________________________________________
consensus TTAAAGATGCTTTGGATCCCAACAATATCATGAATCCAGGAAAGCTCATCCCCCCTCATG
 
. : . : . : . : . : . :
rJMFF035E10+ TTTGCTTCTAAAGGACCGAAATTCTCTACATTGTCAGTTGTCTTGAAAACCGAATTGTGA
                      ____________________________________________________________
consensus TTTGCTTCTAAAGGACCGAAATTCTCTACATTGTCAGTTGTCTTGAAAACCGAATTGTGA
 
. : . : . : . : . : . :
rJMFF035E10+ GCCCCGAAAGGGGTAGTCAAATGGGTAGAACGTAACATGATTCTCGGACAATAAAATTAG
                      ____________________________________________________________
consensus GCCCCGAAAGGGGTAGTCAAATGGGTAGAACGTAACATGATTCTCGGACAATAAAATTAG