Contig 006883:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A16Sequence600006883 (13)ref|NP_001238096.1|2e-33uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci392006883 (13)
JMFF022L07Sequence549011180 (89)gb|AGH32904.1|1e-91translation elongation factor 1-alpha, partial [Camellia oleifera]680006883 (13)ref|NP_001238096.1|9e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci
JMFF030K22Sequence578006883 (13)ref|NP_001238096.1|3e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci643006883 (13)ref|NP_001238096.1|6e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci
JMFN006D13Sequence640006883 (13)ref|NP_001238096.1|6e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci
JMFN008A08Sequence627006883 (13)ref|NP_001238096.1|5e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci
JMFN010P07Sequence582006883 (13)gb|KHG07070.1|2e-33Copper transport protein ATOX1 [Gossypium arboreum]
JMFN013L08Sequence559006883 (13)ref|NP_564870.1|2e-21copper transport protein ATX1 [Arabidopsis thaliana] sp|Q94BT9.1|ATOX1_ARATH Rec
JMFN016A11Sequence283006883 (13)ref|XP_002315448.2|2e-32hypothetical protein POPTR_0010s24290g [Populus trichocarpa] gb|AAT12488.1| copp
JMFN019K03Sequence617006883 (13)ref|NP_001238096.1|5e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci
JMFN040E10Sequence636006883 (13)ref|NP_001238096.1|6e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci
JMFN041P02Sequence650006883 (13)ref|NP_001238096.1|7e-34uncharacterized protein LOC100305622 [Glycine max] gb|ACU13402.1| unknown [Glyci

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF022L07- ACAAGCAATAG
                      ____________________________________________________________
consensus ACAAGCAATAG
 
. : . : . : . : . : . :
rJMFF022L07- GAATTGTAGAACATAAGAGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
JMFN010P07+ ACATAAGAGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
JMFN008A08+ TTGTAGAACATAAGAGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
rJMFF001A16- AGCACCACCACCACCAGTAGCT
JMFN013L08+ ACATAAGAGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
JMFN006D13+ TTGTAGAACATAAGAGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
JMFN040E10+ TTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
JMFN041P02+ TACAAGCACCACCACCAGCAGTAGCT
JMFN019K03+ TACAAGCACCACCACCACCAGTAGCT
JMFF001A16+ GTAGCT
rJMFF030K22- AGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
                      ____________________________________________________________
consensus GAATTGTAGAACATAAGAGTGGTTTTTATTATGTTACAAGCACCACCACCACCAGTAGCT
 
. : . : . : . : . : . :
rJMFF022L07- ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN010P07+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN008A08+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
rJMFF001A16- ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN013L08+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN006D13+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN040E10+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN041P02+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFN019K03+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFF001A16+ ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
JMFF030K22+ TCACATAAATTGCTTCAACACATAGATAACACATGCAT
rJMFF030K22- ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
                      ____________________________________________________________
consensus ATATATAATAAATTGTTGCATTTCACATAAATTGCTTCAACACATAGATAACACATGCAT
 
. : . : . : . : . : . :
rJMFF022L07- GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN010P07+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN008A08+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
rJMFF001A16- GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN013L08+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN006D13+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN040E10+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN041P02+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFN019K03+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFF001A16+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
JMFF030K22+ GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
rJMFF030K22- GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
                      ____________________________________________________________
consensus GCCTAGATTCCCAGTAGTACTTGTCAACAAGAAGTTGCTGTTGATAGTGATATCAAGCAG
 
. : . : . : . : . : . :
rJMFF022L07- TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN010P07+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN008A08+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
rJMFF001A16- TGGCAACAGCTGTTGAAGGCTCCGGTTTANGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN013L08+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN006D13+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN040E10+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN041P02+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFN019K03+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFF001A16+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
JMFF030K22+ TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
rJMFF030K22- TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
                      ____________________________________________________________
consensus TGGCAACAGCTGTTGAAGGCTCCGGTTTAGGCTGTGCTGGTGGCTCTGCTGATGGCTGGG
 
. : . : . : . : . : . :
rJMFF022L07- CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN010P07+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN008A08+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
rJMFF001A16- CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN013L08+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN006D13+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN040E10+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN041P02+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFN019K03+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFF001A16+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
JMFF030K22+ CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
rJMFF030K22- CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
                      ____________________________________________________________
consensus CCAGGGGGCCTGATTCGGGCTGTTTTGGTGGCTCCTCCACTGCTTGGGCCGGGGGCCCTG
 
. : . : . : . : . : . :
rJMFF022L07- ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN010P07+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN008A08+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
rJMFF001A16- ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN013L08+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN006D13+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN040E10+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN041P02+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN019K03+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFF001A16+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFF030K22+ ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
JMFN016A11+ GATTCAGGCTGAG
rJMFF030K22- ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
                      ____________________________________________________________
consensus ATTCAGGCTGTTTTGGTGGCTCCTCCAATGCTTGGGCTGAAGGCACTGATTCAGGCTGAG
 
. : . : . : . : . : . :
rJMFF022L07- CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN010P07+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN008A08+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
rJMFF001A16- CTGGTGGTGGTGGCGGTGGTGCTTCCNATTCCCAAAATCAANTTTTCTTTCCA
JMFN013L08+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN006D13+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN040E10+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN041P02+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN019K03+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFF001A16+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATCAAGTTTTCTTTCCAGTCTTGG
JMFF030K22+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
JMFN016A11+ CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTGTTGG
rJMFF030K22- CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
                      ____________________________________________________________
consensus CTGGTGGTGGTGGCGGTGGTGCTTCCGATTCCCAAAATGAAGTTTTCTTTCCAGTCTTGG
 
. : . : . : . : . : . :
rJMFF022L07- TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN010P07+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN008A08+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN013L08+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN006D13+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN040E10+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN041P02+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN019K03+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFF001A16+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFF030K22+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
JMFN016A11+ TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCAATGTCACCTTATGCTCTT
rJMFF030K22- TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
                      ____________________________________________________________
consensus TAACAGTCTGGAGAACCTCATCTGGTTGCACATTCCCCTTCACTGTCACCTTCTGCTCTT
 
. : . : . : . : . : . :
rJMFF022L07- CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN010P07+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN008A08+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN013L08+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTT-ACAGCCC
JMFN006D13+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN040E10+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN041P02+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN019K03+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFF001A16+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFF030K22+ CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
JMFN016A11+ GTATATTAATGTCAAAAGACTCTACACCTTCCATCATGCCCAAAACCCTCTTGACAGCCC
rJMFF030K22- CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
                      ____________________________________________________________
consensus CTATATTAATGTCAAAAGACTCTACACCTTCCATCTTGCCCAAAACCCTCTTGACAGCCC
 
. : . : . : . : . : . :
rJMFF022L07- CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGAC
JMFN010P07+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGA
JMFN008A08+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFN013L08+ CAACACAGCCTTGGCATGACATTCCAACCT
JMFN006D13+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFN040E10+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFN041P02+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFN019K03+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFF001A16+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFF030K22+ CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
JMFN016A11+ CAACGCAGCCTCGGCATGACATTCCAACGTTGAGAACAACAGTGTGAGACGACATGGTGA
rJMFF030K22- CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
                      ____________________________________________________________
consensus CAACACAGCCTTGGCATGACATTCCAACCTTGAGAACAACAGTCTGAGACGACATGGTGA
 
. : . : . : . : . : . :
JMFN008A08+ GGAATTGGATTCAGAGAAAGAAGAAACACA
JMFN006D13+ GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAG
JMFN040E10+ GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAGGATTGTAG
JMFN041P02+ GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAGGATTGTA
JMFN019K03+ GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGA
JMFF001A16+ GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAGGATTGTAGCTACTT
JMFF030K22+ GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAGGATTGTAGCTACTT
JMFN016A11+ GGAATTGGATTCAGAGAAAGAAGAAACACA
rJMFF030K22- GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAGGATTGTAGCTACTTGGGTACTTTT
                      ____________________________________________________________
consensus GGAATTGGATTCAGAGAAAGAAGAAACACAGAGGAGGATTGTAGCTACTTGGGTACTTTT