Contig 006866:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026F04Sequence567000698 (4)ref|XP_009771569.1|2e-102PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]757006866 (3)ref|XP_009799129.1|4e-114PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]
JMSF017E24Sequence461000698 (4)ref|XP_009771569.1|3e-63PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]723006866 (3)ref|XP_009799129.1|4e-111PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]
JMSF022N06Sequence636000698 (4)ref|XP_009771569.1|2e-102PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]686006866 (3)ref|XP_009590467.1|2e-104PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017E24+ GGCCTCCATCTTCGTGCTGGCAGCCGTT
rJMFF026F04+ GATCCCCCCGGCCTCAATCTTCGTGCTGGCAGCCGTT
                      ____________________________________________________________
consensus GATCCCCCCGGCCTCCATCTTCGTGCTGGCAGCCGTT
 
. : . : . : . : . : . :
rJMSF017E24+ GGAATGATCGTCTCCGTCACAATNTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
rJMSF022N06+ GTCTCCGTCACAATCTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
rJMFF026F04+ GGAATGATCGTCTCCGTCACAATCTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
                      ____________________________________________________________
consensus GGAATGATCGTCTCCGTCACAATCTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
 
. : . : . : . : . : . :
rJMSF017E24+ ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
rJMSF022N06+ ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
rJMFF026F04+ ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
                      ____________________________________________________________
consensus ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
 
. : . : . : . : . : . :
rJMSF017E24+ GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
rJMSF022N06+ GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
rJMFF026F04+ GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
                      ____________________________________________________________
consensus GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
 
. : . : . : . : . : . :
rJMSF017E24+ AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
rJMSF022N06+ AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
rJMFF026F04+ AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
                      ____________________________________________________________
consensus AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
 
. : . : . : . : . : . :
rJMSF017E24+ ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
rJMSF022N06+ ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
rJMFF026F04+ ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
                      ____________________________________________________________
consensus ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
 
. : . : . : . : . : . :
rJMSF017E24+ CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
rJMSF022N06+ CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
rJMFF026F04+ CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
                      ____________________________________________________________
consensus CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
 
. : . : . : . : . : . :
rJMSF017E24+ TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
rJMSF022N06+ TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
rJMFF026F04+ TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
                      ____________________________________________________________
consensus TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
 
. : . : . : . : . : . :
rJMSF017E24+ TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
rJMSF022N06+ TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
rJMFF026F04+ TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
                      ____________________________________________________________
consensus TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
 
. : . : . : . : . : . :
rJMSF017E24+ ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
rJMSF022N06+ ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
rJMFF026F04+ ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
                      ____________________________________________________________
consensus ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
 
. : . : . : . : . : . :
rJMSF017E24+ GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
rJMSF022N06+ GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
rJMFF026F04+ GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
                      ____________________________________________________________
consensus GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
 
. : . : . : . : . : . :
rJMSF017E24+ GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
rJMSF022N06+ GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
rJMFF026F04+ GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
                      ____________________________________________________________
consensus GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
 
. : . : . : . : . : . :
rJMSF017E24+ GATAGGAAGCATATGATATTTGGTTTCCTGAAATG
rJMSF022N06+ GATAGGAAGCATATGATATTTGGTTTCCTGAAATG
rJMFF026F04+ GATAGGAAGCATATGATATTTGGTTTCCTGAAATGTAACTCTCCCAAGTGTTAAGAGAAA
                      ____________________________________________________________
consensus GATAGGAAGCATATGATATTTGGTTTCCTGAAATGTAACTCTCCCAAGTGTTAAGAGAAA