clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF026F04 | Sequence | 567 | 000698 (4) | ref|XP_009771569.1| | 2e-102 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 757 | 006866 (3) | ref|XP_009799129.1| | 4e-114 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] |
JMSF017E24 | Sequence | 461 | 000698 (4) | ref|XP_009771569.1| | 3e-63 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 723 | 006866 (3) | ref|XP_009799129.1| | 4e-111 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] |
JMSF022N06 | Sequence | 636 | 000698 (4) | ref|XP_009771569.1| | 2e-102 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris] | 686 | 006866 (3) | ref|XP_009590467.1| | 2e-104 | PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF017E24+ GGCCTCCATCTTCGTGCTGGCAGCCGTT
rJMFF026F04+ GATCCCCCCGGCCTCAATCTTCGTGCTGGCAGCCGTT
____________________________________________________________
consensus GATCCCCCCGGCCTCCATCTTCGTGCTGGCAGCCGTT
. : . : . : . : . : . :
rJMSF017E24+ GGAATGATCGTCTCCGTCACAATNTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
rJMSF022N06+ GTCTCCGTCACAATCTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
rJMFF026F04+ GGAATGATCGTCTCCGTCACAATCTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
____________________________________________________________
consensus GGAATGATCGTCTCCGTCACAATCTACGACCGAATCCTCGTACCAATCCTGAGGAGGGCG
. : . : . : . : . : . :
rJMSF017E24+ ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
rJMSF022N06+ ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
rJMFF026F04+ ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
____________________________________________________________
consensus ACGGGCAACGAGAGGGGCATCAACATCCTCCAGAGGATCGGGATCGGGATGGTGTTTTCA
. : . : . : . : . : . :
rJMSF017E24+ GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
rJMSF022N06+ GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
rJMFF026F04+ GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
____________________________________________________________
consensus GTCACAACAATGGTAGTTGCAGCCTTGGTAGAAAGGAAGAGACTAAGTGTTGTCCAAGAA
. : . : . : . : . : . :
rJMSF017E24+ AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
rJMSF022N06+ AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
rJMFF026F04+ AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
____________________________________________________________
consensus AGCCCCCTAAAGACCTCAACCTCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTCATC
. : . : . : . : . : . :
rJMSF017E24+ ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
rJMSF022N06+ ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
rJMFF026F04+ ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
____________________________________________________________
consensus ATTGGCATAGGGGATGGCTTCACACTAGTGGGGCTACAAGAGTACTTCTACGATCAAGTC
. : . : . : . : . : . :
rJMSF017E24+ CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
rJMSF022N06+ CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
rJMFF026F04+ CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
____________________________________________________________
consensus CCCGACTCCATGCGAAGCTTGGGAATCGCCTTCTACCTAAGCGTTTTGGGGGCCGCGAAT
. : . : . : . : . : . :
rJMSF017E24+ TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
rJMSF022N06+ TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
rJMFF026F04+ TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
____________________________________________________________
consensus TTCCTTAGCAGCTTCTTGATAACCATAGTGGATCACATAACAGCGAAAACCGGGAAGAGC
. : . : . : . : . : . :
rJMSF017E24+ TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
rJMSF022N06+ TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
rJMFF026F04+ TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
____________________________________________________________
consensus TGGTTCGCAAAAGACTTGAATGGCAGCCGGTTGGACTACTTTTACGCGCTCTTGGCAACC
. : . : . : . : . : . :
rJMSF017E24+ ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
rJMSF022N06+ ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
rJMFF026F04+ ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
____________________________________________________________
consensus ATAACCGCTGTGAACATAGGGGTGTATGCCTTCGTTGCAAAACGCTATTCGTACAAAAGT
. : . : . : . : . : . :
rJMSF017E24+ GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
rJMSF022N06+ GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
rJMFF026F04+ GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
____________________________________________________________
consensus GTGCAGAGAAAGATAACTGTGGCTGTGGCTGATTGCTATGATGCAGAAGATGGTGCTACT
. : . : . : . : . : . :
rJMSF017E24+ GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
rJMSF022N06+ GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
rJMFF026F04+ GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
____________________________________________________________
consensus GCAGCAAAGGTGTAGTGCTTATTAGTAGTGTGTTAAGTTTAGTAGTGTGTGTTACTAAGG
. : . : . : . : . : . :
rJMSF017E24+ GATAGGAAGCATATGATATTTGGTTTCCTGAAATG
rJMSF022N06+ GATAGGAAGCATATGATATTTGGTTTCCTGAAATG
rJMFF026F04+ GATAGGAAGCATATGATATTTGGTTTCCTGAAATGTAACTCTCCCAAGTGTTAAGAGAAA
____________________________________________________________
consensus GATAGGAAGCATATGATATTTGGTTTCCTGAAATGTAACTCTCCCAAGTGTTAAGAGAAA