| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017F01 | Sequence | 544 | 006832 (23) | gb|AAQ23133.1| | 1e-76 | thioredoxin H2 [Ipomoea batatas] | 673 | 006832 (23) | gb|AAQ23133.1| | 5e-76 | thioredoxin H2 [Ipomoea batatas] |
| JMFF018P14 | Sequence | 538 | 006832 (23) | gb|AAQ23133.1| | 2e-67 | thioredoxin H2 [Ipomoea batatas] | 630 | 006832 (23) | gb|AAQ23133.1| | 7e-67 | thioredoxin H2 [Ipomoea batatas] |
| JMFF020B04 | Sequence | 497 | 006832 (23) | gb|AAQ23133.1| | 4e-77 | thioredoxin H2 [Ipomoea batatas] | 622 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] |
| JMFF021B08 | Sequence | 433 | 006832 (23) | gb|AAQ23133.1| | 3e-62 | thioredoxin H2 [Ipomoea batatas] | 666 | 006832 (23) | gb|AAQ23133.1| | 5e-76 | thioredoxin H2 [Ipomoea batatas] |
| JMFF024E08 | Sequence | 506 | 006832 (23) | gb|AAQ23133.1| | 7e-77 | thioredoxin H2 [Ipomoea batatas] | 761 | 006832 (23) | gb|AAQ23133.1| | 2e-75 | thioredoxin H2 [Ipomoea batatas] |
| JMFF033P12 | Sequence | 523 | 006832 (23) | gb|AAQ23133.1| | 1e-69 | thioredoxin H2 [Ipomoea batatas] | |||||
| JMFF035A03 | Sequence | 623 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] | 633 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] |
| JMFF039K17 | Sequence | 581 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] | |||||
| JMFF044B13 | Sequence | 645 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] | 618 | 006832 (23) | gb|AAQ23133.1| | 3e-76 | thioredoxin H2 [Ipomoea batatas] |
| JMFF046E09 | Sequence | 595 | 006832 (23) | gb|AAQ23133.1| | 9e-67 | thioredoxin H2 [Ipomoea batatas] | 621 | 006832 (23) | gb|AAQ23133.1| | 6e-70 | thioredoxin H2 [Ipomoea batatas] |
| JMFF048E14 | Sequence | 261 | 006832 (23) | gb|AAQ23133.1| | 4e-25 | thioredoxin H2 [Ipomoea batatas] | 235 | 006832 (23) | |||
| JMSF008P02 | Sequence | 297 | 006832 (23) | gb|AAQ23133.1| | 1e-33 | thioredoxin H2 [Ipomoea batatas] | |||||
| JMSF032H12 | Sequence | 688 | 006832 (23) | gb|AAQ23133.1| | 6e-76 | thioredoxin H2 [Ipomoea batatas] | 681 | 006832 (23) | gb|AAQ23133.1| | 5e-76 | thioredoxin H2 [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMFF024E08- TTGGGTAGAATTTCTCAAAT
____________________________________________________________
consensus TTGGGTAGAATTTCTCAAAT
. : . : . : . : . : . :
JMSF032H12+ ATGAGTTAACAGCTATTATTTGGTGAGATG
rJMSF032H12- ATGAGTTAACAGCTATTATTTGGTGAGATG
rJMFF024E08- GCAGTGTTTCTGGCCTTCTTAGCACAAGATATGAGTTAACAGCTATTATTTGGTGAGATG
____________________________________________________________
consensus GCAGTGTTTCTGGCCTTCTTAGCACAAGATATGAGTTAACAGCTATTATTTGGTGAGATG
. : . : . : . : . : . :
rJMFF033P12- GTTTCTTTATAGT
rJMFF044B13- ACAAGGATAAAGACTGTTTCTTTATAGT
JMSF032H12+ AACCCACTCATAAAGACATGTATCTAAGATGTACAAGGATAAAGACTGTTTCTTTATAGT
rJMSF032H12- AACCCACTCATAAAGACATGTATCTAAGATGTACAAGGATAAAGACTGTTTCTTTATAGT
rJMFF048E14- AAGACTGTTTCTTTATAGT
rJMFF046E09- CAAGGATAAAGACTGTTTCTTTATAGT
JMFF046E09+ CAAGGATAAAGACTGTTTCTTTATAGT
rJMFF024E08- AACCCACTCATAAAGACATGTATCTAAGATGTACAAGGATAAAGACTGTTTCTTTATAGT
rJMFF035A03- CTGTTTCTTTATAGT
rJMFF020B04- CTGTTTCTTTATAGT
JMFF035A03+ TAGT
JMFF044B13+ CAAGGATAAAGACTGTTTCTTTATAGT
rJMFF018P14- GTTTCTTTATAGT
rJMFF021B08- GTTTCTTTATAGT
rJMFF017F01- CTGTTTCTTTATAGT
____________________________________________________________
consensus AACCCACTCATAAAGACATGTATCTAAGATGTACAAGGATAAAGACTGTTTCTTTATAGT
. : . : . : . : . : . :
rJMFF033P12- CNAATAANATGAAAGAGGTTGGTGTCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF044B13- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
JMSF032H12+ CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMSF032H12- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF048E14- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF046E09- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
JMFF046E09+ CAAATAACATGAAAGAGGTGGTT-CATTTACATTACAGTTTATACTTTATACTCAACATG
rJMFF024E08- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF035A03- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF020B04- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
JMFF035A03+ CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
JMFF044B13+ CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF018P14- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF021B08- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
rJMFF017F01- CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
____________________________________________________________
consensus CAAATAACATGAAAGAGGTTGGT-TCATTACATTACAGTTTATACTTTATACTCAACATG
. : . : . : . : . : . :
rJMFF033P12- AAAATAACACCCACCC-ATAGNGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF044B13- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMSF032H12+ AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMSF032H12- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF048E14- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF046E09- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF046E09+ AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF024E08- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF035A03- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF020B04- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF035A03+ AAAATAACACCCACCCAATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF020B04+ ATGGTTCT
JMFF044B13+ AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
rJMFF018P14- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF024E08+ GGTTCT
rJMFF021B08- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF039K17+ AGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF018P14+ TGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
JMFF017F01+ TTCT
rJMFF017F01- AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
____________________________________________________________
consensus AAAATAACACCCACCC-ATAGTGTTCTTTTTCCCTTTATTTGATTGAAATTAATGGTTCT
. : . : . : . : . : . :
rJMFF033P12- TTACCCAATAAAATAANAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF044B13- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMSF032H12+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMSF032H12- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF048E14- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF046E09- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF046E09+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF024E08- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF035A03- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF020B04- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF035A03+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF020B04+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF044B13+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF018P14- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF024E08+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF021B08- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF039K17+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF018P14+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
JMFF017F01+ TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
rJMFF017F01- TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
____________________________________________________________
consensus TTACCCAATAAAATAAGAACAAGCATCAAGCAGCAAATTTGGGGACTTCCTTATGCTGGA
. : . : . : . : . : . :
rJMFF033P12- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF044B13- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMSF032H12+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMSF032H12- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF048E14- GGAT-ATCCTTTCAAGCTCATCTTTCTTGGCTCCCACTA
rJMFF046E09- GGAT-ATCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF046E09+ GGAT-ATCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF024E08- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF035A03- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF020B04- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF035A03+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF020B04+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF044B13+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF018P14- GGAT-ATCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF024E08+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF021B08+ TGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF021B08- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF039K17+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF018P14+ GGAT-ATCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
JMFF017F01+ GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
rJMFF017F01- GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
____________________________________________________________
consensus GGATCTTCCTTTCAAGCTCATCTTTCTTGGCTCCCACTACCCTACCCACCTCCTTGCCTT
. : . : . : . : . : . :
rJMFF033P12- GCTTCANCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGANA
rJMFF044B13- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMSF032H12+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMSF032H12- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF046E09- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF046E09+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF024E08- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF035A03- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF020B04- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF035A03+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF020B04+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF044B13+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF018P14- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF024E08+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF021B08+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF021B08- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF039K17+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF018P14+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
JMFF017F01+ GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
rJMFF017F01- GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
____________________________________________________________
consensus GCTTCAGCAGTAAGAACGTGGGCATCGCCTGCACTGAAAACTCCTGGGCCACATCCGAGA
. : . : . : . : . : . :
rJMFF033P12- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF044B13- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMSF032H12+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMSF032H12- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF046E09- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF046E09+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF024E08- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF035A03- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF020B04- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF035A03+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF020B04+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF044B13+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF018P14- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF024E08+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF021B08+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
rJMFF021B08- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF039K17+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF018P14+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF017F01+ GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMSF008P02+ AATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
JMFF048E14+ A
rJMFF017F01- GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
____________________________________________________________
consensus GCTCATCCACGTCTATCTTTATGAAATCAACGTCGGTGAACTTGCTCGCCATTTGTTTGA
. : . : . : . : . : . :
rJMFF033P12- NGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCNCCACCATCA
rJMFF044B13- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMSF032H12+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMSF032H12- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF046E09- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF046E09+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF024E08- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF035A03- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF020B04- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF035A03+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF020B04+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF044B13+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF018P14- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF024E08+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF021B08+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF021B08- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF039K17+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF018P14+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF017F01+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMSF008P02+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
JMFF048E14+ CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
rJMFF017F01- CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
____________________________________________________________
consensus CGAAAGGCTCCATCATCTTGCAGGGCCCGCACCATGCTGCCGCGAAATCCACCACCATCA
. : . : . : . : . : . :
rJMFF033P12- ATTTATTGAGTTGNTTGGAGGCGTTGAAGNGCANCTGCCATCGTTGAGATGAATGAAATG
rJMFF044B13- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMSF032H12+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMSF032H12- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF046E09- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF046E09+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF024E08- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF035A03- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF020B04- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF035A03+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF020B04+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF044B13+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF018P14- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF024E08+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF021B08+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF021B08- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF039K17+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF018P14+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF017F01+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMSF008P02+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
JMFF048E14+ ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
rJMFF017F01- ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
____________________________________________________________
consensus ATTTATTGAGTTGTTTGGAGGCGTTGAAGTGCAGCTGCCATCGTTGAGATGAATGAAATG
. : . : . : . : . : . :
rJMFF033P12- CANTCACCCGAGACGGATCGGACGACGATGA
rJMFF044B13- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMSF032H12+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMSF032H12- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF046E09- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGAGTGTTGCCGCCGCCGCCCCAT
JMFF046E09+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF024E08- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF035A03- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF020B04- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF035A03+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF020B04+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF044B13+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF018P14- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF024E08+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF021B08+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF021B08- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF039K17+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF018P14+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF017F01+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMSF008P02+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
JMFF048E14+ CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
rJMFF017F01- CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
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consensus CAGTCACCCGAGACGGTTCGGACGACGATGACTCATCGGTTGTTGCCGCCGCCGCCCCAT
. : . : . : . : . : . :
rJMFF044B13- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTC
JMSF032H12+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTC
rJMSF032H12- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTC
rJMFF046E09- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTG
JMFF046E09+ CGCCACCCACCACATTCGACAGAACCCC
rJMFF024E08- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
rJMFF035A03- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
rJMFF020B04- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF035A03+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF020B04+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF044B13+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
rJMFF018P14- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF024E08+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF021B08+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
rJMFF021B08- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF039K17+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF018P14+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF017F01+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMSF008P02+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
JMFF048E14+ CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
rJMFF017F01- CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
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consensus CGCCACCCACCACATTCGACAGAACCCCTCCCATTGCGTGCTCTTTCCCCTCTCTGTCTC
. : . : . : . : . : . :
rJMFF024E08- TCTCTCTCCTCTCTCA
rJMFF035A03- TCTCTCTCCTCTCTCAACTT
rJMFF020B04- TCTCTCTC
JMFF035A03+ TCTCTCTCCTCTCTCAACTT
JMFF020B04+ TCTCTCTC
JMFF044B13+ TCTCTCTCCTCTCTCAACTT
rJMFF018P14- TCTCTCTCCTCTCTCAACTT
JMFF024E08+ TCTCTCTCCTCTCTCA
JMFF021B08+ TCTCTCTCCTCTCTCAACTTAAGAGGGTCAACACTCAAT
rJMFF021B08- TCTCTCTCCTCTCTCAACTTAAGAGGGTCAACACTCAAT
JMFF039K17+ TCTCTCTCCTCTCTCAACTTAAGAGGGTCAACACTCAAT
JMFF018P14+ TCTCTCTCCTCTCTCAACTT
JMFF017F01+ TCTCTCTCCTCTCTCAACTTAAGAGGGTCAACACTCAAT
JMSF008P02+ TCTCTCTCCTCTCTCAACTT
JMFF048E14+ TCTCTCTCCTCTCTCAACTT
rJMFF017F01- TCTCTCTCCTCTCTCAACTTAAGAGGGTCAACACTCAATAGAGAACCTTTATCCCAAAAC
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consensus TCTCTCTCCTCTCTCAACTTAAGAGGGTCAACACTCAATAGAGAACCTTTATCCCAAAAC