Contig 006804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008C01Sequence268000048 (5)ref|XP_010318068.1|3e-05PREDICTED: uncharacterized protein LOC101255670 isoform X2 [Solanum lycopersicu679006804 (3)ref|XP_006347538.1|146PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
JMFF010I14Sequence617000048 (5)ref|XP_009629933.1|228PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]742006804 (3)ref|XP_006347538.1|179PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
JMSF018E11Sequence505000048 (5)ref|XP_009629933.1|195PREDICTED: uncharacterized protein LOC104119994 [Nicotiana tomentosiformis]765006804 (3)ref|XP_006347538.1|215PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018E11+ AGTTCCAGGACGTTCAAATGCAAT
                      ____________________________________________________________
consensus AGTTCCAGGACGTTCAAATGCAAT
 
. : . : . : . : . : . :
rJMSF018E11+ CAATANTGCTGAAAGGCTTGGNATTCCAAAGGTGATTCTGGATAATGCTCGTGAACTTTA
rJMFF010I14+ TGGATAATGCTCGTGANCTTTA
                      ____________________________________________________________
consensus CAATANTGCTGAAAGGCTTGGNATTCCAAAGGTGATTCTGGATAATGCTCGTGAACTTTA
 
. : . : . : . : . : . :
rJMSF018E11+ TGGAGTAGCAAATGCAGAAATTAATGAGGTTATACTTGATATGGAGAGATTTAAGCAGAA
rJMFF008C01+ ATGGAGAGATTTAAGCAGAA
rJMFF010I14+ TGGAGTAGCAAATGCAGAAATTAATGAGGTTATACTTGATATGGAGAGATTTAAGCAGAA
                      ____________________________________________________________
consensus TGGAGTAGCAAATGCAGAAATTAATGAGGTTATACTTGATATGGAGAGATTTAAGCAGAA
 
. : . : . : . : . : . :
rJMSF018E11+ ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
rJMFF008C01+ ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
rJMFF010I14+ ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
                      ____________________________________________________________
consensus ATTTCATGAGCAAATTCACGAGGCTCAACATTACTTGAAGGTCTCAAGAGAACTTCATCA
 
. : . : . : . : . : . :
rJMSF018E11+ GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
rJMFF008C01+ GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
rJMFF010I14+ GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
                      ____________________________________________________________
consensus GAAGTTACTTGTCACCAGAAAGAGAATCACTGAGCATGGCATTGAACAAAGATACAGGAA
 
. : . : . : . : . : . :
rJMSF018E11+ GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
rJMFF008C01+ GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
rJMFF010I14+ GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
                      ____________________________________________________________
consensus GATAGAAGAAATGTCTCGGGTAGCAGCAGCAGCGCGCTCTGCACTTCACAGGAGAGCACG
 
. : . : . : . : . : . :
rJMSF018E11+ ACAATTTCGTGCATCTCCTAGGCAACCTTCTGAAACAAATTCAAACAACGGACAGTACAC
rJMFF008C01+ ACAATTTCGTGCATCTCCTAGGCAACCTTNTGAAACAAATTCAAACAACGGACAGTACAC
rJMFF010I14+ ACAATTTCGTGCATCTCCTAGGCAACCTTCTGAAACAAATTCAAACAACGGACAGTACAC
                      ____________________________________________________________
consensus ACAATTTCGTGCATCTCCTAGGCAACCTTCTGAAACAAATTCAAACAACGGACAGTACAC
 
. : . : . : . : . : . :
rJMSF018E11+ TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
rJMFF008C01+ TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
rJMFF010I14+ TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
                      ____________________________________________________________
consensus TTCAGCATTGGAAAGTGACAATACTAACAAGACATTGGAAATCGAAACATGTGAAGCTAC
 
. : . : . : . : . : . :
rJMSF018E11+ CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
rJMFF008C01+ CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
rJMFF010I14+ CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
                      ____________________________________________________________
consensus CACCATGGCTGAGAGCGCAGTCAACAACTTAAAGCCACGTGTTTCAGCGCAAAAGAGGGC
 
. : . : . : . : . : . :
rJMSF018E11+ TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
rJMFF008C01+ TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
rJMFF010I14+ TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
                      ____________________________________________________________
consensus TGGACTTCCCAACGTGGGTGATGCAGTGCATATTGTTTCCCTAGGCAGGAAAGCTCTTGT
 
. : . : . : . : . : . :
rJMSF018E11+ CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
rJMFF008C01+ CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
rJMFF010I14+ CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
                      ____________________________________________________________
consensus CCTAAAAGTGGATTCTTCTCGAGATGAAGTCGTAGTTCAAGCCGGTAACCTGAAGCTTAA
 
. : . : . : . : . : . :
rJMSF018E11+ ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
rJMFF008C01+ ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
rJMFF010I14+ ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
                      ____________________________________________________________
consensus ATTGAAAGCATCAGATGTAACTTAACAGCTAGGTGTTCATCATCCCTTGAGCTCAGATGT
 
. : . : . : . : . : . :
rJMSF018E11+ ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
rJMFF008C01+ ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
rJMFF010I14+ ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
                      ____________________________________________________________
consensus ATTTCGTGGCTTGCCAATAGCTATTAATACTAGTGCAGTGCATGACTTTCTGCCTCGGCA
 
. : . : . : . : . : . :
rJMSF018E11+ TAAAGTACCTTCCTC
rJMFF008C01+ TAAAGTACCTTCCTCAATTGTA-TTTCCCACGTATATATTTGGTGCGATATATATATCGT
rJMFF010I14+ TAAAGTACCTTCCTCAATTGTATTTTCCCACGTATATATTTGGTGCGATATATATATCGT
                      ____________________________________________________________
consensus TAAAGTACCTTCCTCAATTGTATTTTCCCACGTATATATTTGGTGCGATATATATATCGT