Contig 006787:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005I02Sequence446008751 (5)ref|XP_009346323.1|7e-40PREDICTED: dnaJ homolog subfamily B member 4-like [Pyrus x bretschneideri] ref|X469006787 (6)ref|XP_004302588.1|9e-18PREDICTED: dnaJ homolog subfamily B member 13 [Fragaria vesca subsp. vesca]
JMFF006N05Sequence528008751 (5)ref|XP_004246761.1|5e-63PREDICTED: dnaJ homolog subfamily B member 13 [Solanum lycopersicum]808006787 (6)ref|XP_009598062.1|2e-96PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis]
JMFF010O03Sequence573008751 (5)ref|XP_006365599.1|1e-59PREDICTED: dnaJ homolog subfamily B member 4-like [Solanum tuberosum]770006787 (6)ref|XP_009598062.1|7e-104PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis]
JMFF027C21Sequence531008751 (5)ref|XP_006365599.1|5e-63PREDICTED: dnaJ homolog subfamily B member 4-like [Solanum tuberosum]756006787 (6)ref|XP_009598062.1|3e-96PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis]
JMFF039C23Sequence430006787 (6)ref|XP_004302588.1|1e-11PREDICTED: dnaJ homolog subfamily B member 13 [Fragaria vesca subsp. vesca]
JMSF017O01Sequence395008751 (5)gb|KDP24444.1|4e-44hypothetical protein JCGZ_25008 [Jatropha curcas]500006787 (6)ref|XP_009598062.1|4e-24PREDICTED: dnaJ homolog subfamily B member 4 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006N05+ GATGA
                      ____________________________________________________________
consensus GATGA
 
. : . : . : . : . : . :
rJMFF006N05+ TATGTTTGCTCAATTTAGGAATGTCGCAGGTGAGAATGCCGGCGGCAATGTGCTAAGAAA
rJMFF027C21+ TGTGCCAAGAAA
rJMFF010O03+ GAATGCCGGCGGCAATGTGCCAAGAAA
                      ____________________________________________________________
consensus TATGTTTGCTCAATTTAGGAATGTCGCAGGTGAGAATGCCGGCGGCAATGTGCCAAGAAA
 
. : . : . : . : . : . :
rJMFF006N05+ GGCACCTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
rJMFF027C21+ GGCACNTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
rJMFF010O03+ GGCACCTGCCATNGAGCGGACACTT-CCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
                      ____________________________________________________________
consensus GGCACCTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
 
. : . : . : . : . : . :
rJMFF006N05+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
rJMFF027C21+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
rJMFF010O03+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
                      ____________________________________________________________
consensus CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
 
. : . : . : . : . : . :
rJMFF006N05+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
rJMFF027C21+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
rJMFF010O03+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
                      ____________________________________________________________
consensus AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
 
. : . : . : . : . : . :
rJMFF006N05+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
rJMFF027C21+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
rJMFF010O03+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
                      ____________________________________________________________
consensus CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
 
. : . : . : . : . : . :
rJMFF006N05+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMFF027C21+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMFF010O03+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMSF017O01+ CCCAAAAGCTTT
                      ____________________________________________________________
consensus AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
 
. : . : . : . : . : . :
rJMFF006N05+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
rJMFF027C21+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAGCAACCCTCGATGGCCGAAATC
rJMFF010O03+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
rJMSF017O01+ CATTTNTNGNGGCTTTGNCTGGCTATNCTGCNCAAGTAACAACCCTCGATGGCCGAAATN
                      ____________________________________________________________
consensus CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
 
. : . : . : . : . : . :
rJMFF006N05+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMFF027C21+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMFF010O03+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMSF017O01+ TCNCTATNCCCNTCNCTTCAATCATAAGTCCNACATNCGAAGNAGTTGTTAAAGGNGAGG
rJMFF039C23+ CTTCAATCATAAGTNCAACATNCGAAGAAGTTGTTAAAGGTGAGG
rJMFF005I02+ CTTCAATCATAAGTCCAACATNCGAAGAAGTTGTTAAAGGNGAGG
                      ____________________________________________________________
consensus TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
 
. : . : . : . : . : . :
rJMFF006N05+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMFF027C21+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMFF010O03+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMSF017O01+ GGNTGCCTATCCCGNAGGAGCCCNGCAAAAGGGGGAACCTNCGNATAAAGTTCAACNTTA
rJMFF039C23+ GGANGCCTATNCCGAAGGAGCCCAGCAAAAGGGGGNACCTCCGAATAAANTTNAACATTA
rJMFF005I02+ GGATGCCTATNCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTNAACATTA
                      ____________________________________________________________
consensus GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
 
. : . : . : . : . : . :
rJMFF006N05+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMFF027C21+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMFF010O03+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMSF017O01+ AGTTNCCCNGCAAGNTTACATTTGAGCAGAAAGCCGGGNTTNAGAAACNGTTAACCTGNT
rJMFF039C23+ AGTTNCCCAGCAAGNTTNCATTTGAGCAGAAANCCGGGATTAAGAAACAGTTAACATGAT
rJMFF005I02+ AGTTCCCCAGCAAGNTTACATTTGAGCAGAAANCCGGGATTAAGAAACAGTTAACATGAT
                      ____________________________________________________________
consensus AGTTCCCCAGCAAGCTTACATTTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
 
. : . : . : . : . : . :
rJMFF006N05+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMFF027C21+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMFF010O03+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMSF017O01+ GNGAAGNTCAATGCTNGGCAACNGAGAGAGCCTTNTATTTATTAAAAGCTCGCGNCNGAT
rJMFF039C23+ GAGAAGATCAATGNTAGGCAACAGAGAGAGCNTTTTATTTATTAAAAGCTCGNGACAGAT
rJMFF005I02+ GAGAAGATCAATGNTAGGCAACAGAGAGAGCNTTTTATTTATTAAAAGCTCGNGACAGAT
                      ____________________________________________________________
consensus GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
 
. : . : . : . : . : . :
rJMFF006N05+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMFF027C21+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMFF010O03+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMSF017O01+ TTCNCTCATNTTCTTGCTTGGTNTTTCCCNGCAAAGTAAATTTTAATTCNAGAGNTGCTG
rJMFF039C23+ TTCACTCATTTTTTTGNTTGGTNTTTCCCTGCAAANTAAATTTTAATTCAAGAGTTGNTG
rJMFF005I02+ TTCNCTCATTTTNTTGNTTGGTNTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGNTG
                      ____________________________________________________________
consensus TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
 
. : . : . : . : . : . :
rJMFF006N05+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMFF027C21+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMFF010O03+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMSF017O01+ AATTTGNGNATTTGTGNGATTTGTNTGGTAGTAGGNGTATCNTAATTTTTATGNTAATTT
rJMFF039C23+ AANTTGNGTATTTGTGAGANTTGTTTGGTAGTAGGAGTATCATAATTTTTATGGTAANTT
rJMFF005I02+ AANTTGNGTATTTGTGAGANTTGTTTGGTAGTAGGAGTATCATAATTTTTATGGTAATTT
                      ____________________________________________________________
consensus AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
 
. : . : . : . : . : . :
rJMFF006N05+ GCCTACGAAATTATAGAGCAACA
rJMFF027C21+ GCCTACGAAATTATAGAGCAACAT
rJMFF010O03+ GCCTACGAAATTATAGAGCAACAT
rJMSF017O01+ GCCTACGAAATTATAGNGCAACATCCNTGATTGNTGCCAAAA
rJMFF039C23+ GCCTNCGAAATTATAGAGCAACATCCNTGATTGCTGCCAAAANCTTCCCNGNGCTNTTGT
rJMFF005I02+ GCCTNCGAAATTATAGAGCAACATCCTTGATTGNTGCCAAAANCTTCCCNGNGCTNTTGT
                      ____________________________________________________________
consensus GCCTACGAAATTATAGAGCAACATCCTTGATTGCTGCCAAAANCTTCCCNGNGCTNTTGT
 
. : . : . : . : . : . :
rJMFF039C23+ TTTTATACT
rJMFF005I02+ TTTTATACTNTTANTTGNAACNGNGAATTGCCNTTAAAAAAAAAAAATCTATAAGGAAAA
                      ____________________________________________________________
consensus TTTTATACTNTTANTTGNAACNGNGAATTGCCNTTAAAAAAAAAAAATCTATAAGGAAAA