clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004B20 | Sequence | 313 | 006777 (24) | 808 | 006777 (24) | ref|XP_009789611.1| | 2e-65 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | |||
JMFF005I14 | Sequence | 497 | 006777 (24) | ref|XP_009611977.1| | 1e-31 | PREDICTED: barley B recombinant-like protein D [Nicotiana tomentosiformis] | 718 | 006777 (24) | ref|XP_009789611.1| | 5e-65 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
JMFF021J14 | Sequence | 594 | 006777 (24) | ref|XP_009789611.1| | 7e-43 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | |||||
JMFF030K10 | Sequence | 531 | 006777 (24) | ref|XP_009789611.1| | 2e-35 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | 675 | 006777 (24) | ref|XP_009789611.1| | 3e-65 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
JMFF031I01 | Sequence | 506 | 006777 (24) | ref|XP_009611977.1| | 4e-33 | PREDICTED: barley B recombinant-like protein D [Nicotiana tomentosiformis] | 717 | 006777 (24) | ref|XP_009789611.1| | 5e-65 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
JMFF032H08 | Sequence | 578 | 006777 (24) | ref|XP_009789611.1| | 5e-41 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | 647 | 006777 (24) | ref|XP_009611977.1| | 2e-65 | PREDICTED: barley B recombinant-like protein D [Nicotiana tomentosiformis] |
JMFF032I10 | Sequence | 544 | 006777 (24) | ref|XP_009789611.1| | 5e-41 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | 778 | 006777 (24) | ref|XP_009789611.1| | 6e-73 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
JMFF040O03 | Sequence | 523 | 018466 | 704 | 006777 (24) | ref|XP_009789611.1| | 2e-73 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | |||
JMFF046F04 | Sequence | 476 | 006777 (24) | ref|XP_009611977.1| | 5e-19 | PREDICTED: barley B recombinant-like protein D [Nicotiana tomentosiformis] | 156 | 006777 (24) | |||
JMFN041K16 | Sequence | 506 | 006777 (24) | ref|XP_011099810.1| | 3e-64 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Sesamum indicum] ref|XP_011099811. | |||||
JMFN046K07 | Sequence | 506 | 006777 (24) | ref|XP_011099810.1| | 3e-64 | PREDICTED: protein BASIC PENTACYSTEINE6-like [Sesamum indicum] ref|XP_011099811. | |||||
JMSF019K17 | Sequence | 567 | 006777 (24) | ref|XP_009789611.1| | 5e-40 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | 728 | 006777 (24) | ref|XP_009789611.1| | 4e-73 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
JMSF028E20 | Sequence | 653 | 006777 (24) | ref|XP_009789611.1| | 4e-43 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | 780 | 006777 (24) | ref|XP_009789611.1| | 5e-73 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
JMSF047M15 | Sequence | 673 | 006777 (24) | ref|XP_009789611.1| | 6e-48 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 | 722 | 006777 (24) | ref|XP_009789611.1| | 9e-71 | PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] gb|ADV5938 |
This contig is upended
. : . : . : . : . : . :
JMFF046F04- TGGGGGAAATCAATGACTAAAAATAAACATAAAAATAGCTCTCTGCCGTCGTGATC
____________________________________________________________
consensus TGGGGGAAATCAATGACTAAAAATAAACATAAAAATAGCTCTCTGCCGTCGTGATC
. : . : . : . : . : . :
JMFF046F04- TCCTGTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMFF030K10- GTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMSF028E20- TGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMFF021J14- TATATTCTCGTTT
JMFF032H08- GTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMSF019K17- GTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMFF032I10- TATATTCTCGTTT
JMFF031I01- GTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMFF005I14- GTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMFF004B20- GTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
JMSF047M15- GTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
____________________________________________________________
consensus TCCTGTGTTGTGTTTTCTTTCCGGAGGCACGACCCGATCCGACATACTATATTCTCGTTT
. : . : . : . : . : . :
JMFF046F04- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF030K10- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMSF028E20- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF021J14- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF032H08- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMSF019K17- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF032I10- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF031I01- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF005I14- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMFF004B20- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
JMSF047M15- TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
____________________________________________________________
consensus TCTTGCAGGCCAGCGGTAGATCCGGTCTCTTTAAACGCCGTCGTTCCTTCCTTGACGACG
. : . : . : . : . : . :
JMFF046F04- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF030K10- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMSF028E20- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF021J14- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF032H08- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMSF019K17- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF032I10- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF031I01- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF005I14- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMFF004B20- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
JMSF047M15- CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
____________________________________________________________
consensus CCGCATCGTTCCTTCTTCCCCGAGTAGCTCCGCCGCTAGATTACGGCTTCTCGGTCGGAT
. : . : . : . : . : . :
JMFF046F04- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF030K10- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMSF028E20- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF021J14- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF032H08- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMSF019K17- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF032I10- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF031I01- ATCTGGGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF005I14- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMFF004B20- ATCTGGGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
JMSF047M15- ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
____________________________________________________________
consensus ATCTGAGCTCTGCGTTTCGTGTTTTTCTCTCTAGCGTTTGAAATGGCCAAAGTTGAGATG
. : . : . : . : . : . :
JMFF046F04- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF030K10- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMSF028E20- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF021J14- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF032H08- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMSF019K17- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF032I10- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF031I01- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF005I14- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
JMFF004B20- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGANCANAACAACTCAACTATAAGGACATAC
JMSF047M15- GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
____________________________________________________________
consensus GGTTGCTAGTTTGCGTTCCTCTTTATGATGGACCAGAACAACTCAACTATAAGGACATAC
. : . : . : . : . : . :
JMFF046F04- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF030K10- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMSF028E20- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF021J14- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF032H08- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMSF019K17- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF032I10- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF031I01- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF005I14- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
JMFF004B20- ATGGCCATCATGGCTGA
JMSF047M15- ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
____________________________________________________________
consensus ATGGCCATCATGGCTGAGAGGGATGCTGCCATCCTAGAACGGAACATGGCCCTAGACGAG
. : . : . : . : . : . :
JMFF046F04- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMFF030K10- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMSF028E20- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMFF021J14- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMFF032H08- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMSF019K17- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMFF032I10- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMFF031I01- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMFF005I14- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
JMSF047M15- AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
____________________________________________________________
consensus AGAAAAAGAGCTTTAGCAGAGCGAGACATGGCGATGTTGCAGAGGGATGCTGCAATTGCA
. : . : . : . : . : . :
JMFF030K10- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMSF028E20- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMFF021J14- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMFF032H08- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMSF019K17- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMFF032I10- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMFF031I01- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMFF005I14- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
JMSF047M15- GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
____________________________________________________________
consensus GAGCGCAATACTGCCCTAGAGGAACGTGATAATGCCATATCTGCCCTTAAATTGCGGGAA
. : . : . : . : . : . :
JMFF030K10- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACAT
JMSF028E20- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
JMFF021J14- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
JMFF032H08- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
JMSF019K17- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
JMFF032I10- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
JMFF031I01- AGCTCAATGAATGATGAAGATATTGTTTCC
JMFF005I14- AGCTCAATGAATGATGAAGAT
JMSF047M15- AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
rJMSF028E20+ TAC
____________________________________________________________
consensus AGCTCAATGAATGATGAAGATATTGTTTCCAAGTCACCAGGAGCTGAACACATCCATTAC
. : . : . : . : . : . :
JMSF028E20- CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGACCCAACAGAAAACCTCACA
JMFF021J14- CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGACCCAACAGAAAACCTCACA
JMFF032H08- CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGAC
JMSF019K17- CAGCAGGAGATGCATGAAATGATAAGTGCAGC
JMFF032I10- CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGACCCAAC
JMSF047M15- CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGACCCAACAGAAAACCTCACA
rJMSF028E20+ CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGACCCAACAGAAAACCTCACA
____________________________________________________________
consensus CAGCAGGAGATGCATGAAATGATAAGTGCAGCTGCTTATGACCCAACAGAAAACCTCACA
. : . : . : . : . : . :
JMSF028E20- AACGACCCC-TTCAACGTGACAGATCCTACTCCTCAAACTGCCAATAATCCCAGGAA
JMFF021J14- AACGACCCC-TTCAACGTGACAGATCCTACTCCTCAAA
JMSF047M15- AACGACCCC-TTCAACGTGACAGATCCTACTCCTCAAACTGCCAATAATCCCAGGAAGGT
rJMSF028E20+ AACGACCCCTTTCAACGTGACAGATCCTACTCCTCAAACTGCCAATAATCCCAGGAAGGT
rJMFF040O03+ AACGTGACAGATCCTACTCCTCAAACTGCCAATAATCCCAGGAAGGT
rJMSF019K17+ TTCAACGTGACAGATCCTACTCCTCAAACTGCCAATAATCCCAGGAAGGT
rJMSF047M15+ CCAGGAAGGT
rJMFF032I10+ CAAACTGCCAATAATCCCAGGAAGGT
____________________________________________________________
consensus AACGACCCC-TTCAACGTGACAGATCCTACTCCTCAAACTGCCAATAATCCCAGGAAGGT
. : . : . : . : . : . :
JMSF047M15- GAGGCAACCAAAAGAAA
rJMSF028E20+ GAGGCAACCAAAAGAAAGCAAACCTAAAAAGGCATCCAAGTTAGCAAGGGTGGTTAAAAG
rJMFF040O03+ GAGGCAACCAAAAGAAAGCAAACCTAAAAAGGCATCCAAGTTAGCAAGGGTGGTTAAAAG
rJMSF019K17+ GAGGCAACCAAAAGAAAGCAAACCTAAAAAGGCATCCAAGTTAGCAAGGGTGGTTAAAAG
rJMSF047M15+ GAGGCAACCAAAAGAAAGCAAACCTAAAAAGGCATCCAAGTTAGCAAGGGTGGTTAAAAG
rJMFF032I10+ GAGGCAACCAAAAGAAAGCAAACCTAAAAAGGCATCCAAGTTAGCAAGGGTGGTTAAAAG
rJMFF004B20+ CATCCAAGTTAGCAAGGGTGGTTAAAAG
____________________________________________________________
consensus GAGGCAACCAAAAGAAAGCAAACCTAAAAAGGCATCCAAGTTAGCAAGGGTGGTTAAAAG
. : . : . : . : . : . :
rJMSF028E20+ AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTCTACATTCGATGATTGGGA
rJMFF040O03+ AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTCTACATTCGATGATTGGGA
rJMSF019K17+ AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTCTACATTCGATGATTGGGA
rJMSF047M15+ AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTCTACATTCGATGATTGGGA
rJMFF032I10+ AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTCTACATTCGATGATTGGGA
rJMFF005I14+ TACATTCGATGATTGGGA
rJMFF031I01+ ACATTCGATGATTGGGA
rJMFF030K10+ TTCGATGATTGGGA
rJMFF032H08+ GGCAGTTTNTACATTCGATGATTGGGA
rJMFF004B20+ AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTNTACATTCGATGATTGGGA
____________________________________________________________
consensus AGAGGAGGTGGAGGTCGAGGATTTGAGTTGGCAGGCAGTTTCTACATTCGATGATTGGGA
. : . : . : . : . : . :
rJMSF028E20+ TGATAGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMFF040O03+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMSF019K17+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMSF047M15+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMFF032I10+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMFF005I14+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMFF031I01+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMFF030K10+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
JMFN046K07+ CTGGA
JMFN041K16+ CTGGA
rJMFF032H08+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
rJMFF004B20+ TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
____________________________________________________________
consensus TGATGGGAACTGCGGGGAGTTTGTGGACGCCAGTGATGAAGAACAAGACAAGCACCTGGA
. : . : . : . : . : . :
rJMSF028E20+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF040O03+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMSF019K17+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMSF047M15+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF032I10+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF005I14+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF031I01+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF030K10+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
JMFN046K07+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
JMFN041K16+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF032H08+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
rJMFF004B20+ TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
____________________________________________________________
consensus TACATGGGATGAAGATTTCGGTTTAGAGCAGGTAAATTCTGATGTGTCTGCAATGCCAGT
. : . : . : . : . : . :
rJMSF028E20+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF040O03+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMSF019K17+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMSF047M15+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF032I10+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF005I14+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF031I01+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF030K10+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
JMFN046K07+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
JMFN041K16+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF032H08+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
rJMFF004B20+ GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
____________________________________________________________
consensus GCCAGTTTGTTCCTGTACTGGAACCCCTCAACCGTGTTACAAATGGGGGAATGGTGGGTG
. : . : . : . : . : . :
rJMSF028E20+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF040O03+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMSF019K17+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMSF047M15+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF032I10+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF005I14+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF031I01+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF030K10+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
JMFN046K07+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
JMFN041K16+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF032H08+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
rJMFF004B20+ GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
____________________________________________________________
consensus GCAATCAGCCTGCTGCACAACTACCATATCCATGTACCCGTTGCCACAAGCATCACATAA
. : . : . : . : . : . :
rJMSF028E20+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF040O03+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMSF019K17+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMSF047M15+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF032I10+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF005I14+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF031I01+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF030K10+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
JMFN046K07+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
JMFN041K16+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF032H08+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
rJMFF004B20+ GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
____________________________________________________________
consensus GCGCTATTCCAGAGTTGGTGGTCGAAAGATGAGTGCAAGCGCATTCAGTAAACTGCTCAG
. : . : . : . : . : . :
rJMSF028E20+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF040O03+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMSF019K17+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMSF047M15+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF032I10+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF005I14+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF031I01+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF030K10+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
JMFN046K07+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
JMFN041K16+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF032H08+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
rJMFF004B20+ CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
____________________________________________________________
consensus CCGTCTTACTGCCGAAGGCTATGACCTGTCTGCTCCACTTGATCTGAAGGACCATTGGGC
. : . : . : . : . : . :
rJMSF028E20+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF040O03+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMSF019K17+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMSF047M15+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF032I10+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF005I14+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF031I01+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF030K10+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
JMFN046K07+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
JMFN041K16+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF032H08+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
rJMFF004B20+ AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
____________________________________________________________
consensus AAAGCATGGCACAAATCGGTATAGTACAGTAAAATAGCATTGCCAGGGCCAATGGCCAAG
. : . : . : . : . : . :
rJMSF028E20+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF040O03+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMSF019K17+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMSF047M15+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF032I10+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF005I14+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF031I01+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF046F04+ TC
rJMFF030K10+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
JMFN046K07+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
JMFN041K16+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF032H08+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
rJMFF004B20+ GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
____________________________________________________________
consensus GGCCAGCCAGCAGATTGTGCTAGCCTCCTCATCTACCTTTGATTAAAATTATCTACATTC
. : . : . : . : . : . :
rJMSF028E20+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATT
rJMFF040O03+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATT
rJMSF019K17+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMSF047M15+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMFF032I10+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMFF005I14+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMFF031I01+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMFF046F04+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTTTATTTAC
rJMFF030K10+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
JMFN046K07+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
JMFN041K16+ ATGACTCATGGCGTGGAGAAAGACTTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMFF032H08+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
rJMFF004B20+ ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
____________________________________________________________
consensus ATGACTCATGGCGTGGAGAAAGAATTCAAGATGTAGCTCAAAGATTTGAATTCTATTTAC
. : . : . : . : . : . :
rJMSF019K17+ TG
rJMSF047M15+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGT
rJMFF032I10+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
rJMFF005I14+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
rJMFF031I01+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
rJMFF046F04+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTTTGA
rJMFF030K10+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
JMFN046K07+ TGTGATGGTAGGGTTTTCTTT
JMFN041K16+ TGTGATGGTAGGGTTTTCTTT
rJMFF032H08+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
rJMFF004B20+ TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
____________________________________________________________
consensus TGTGATGGTAGGGTTTTCTTTCAAGAGCGAGCAATCGTTATTATAACAACGTTGTTCTGA
. : . : . : . : . : . :
rJMFF032I10+ ACATATTTTATTTCGAGCATACAATCAAAAAT
rJMFF005I14+ ACATATTTTATTTCGAGCATACAATCAAAAATTGAACTGACATGAGATTGTAATTACAAA
rJMFF031I01+ ACATATTTTATTTCGAGCATACAATCAAAAATTGAACTGACATGAGATTGTAATTACAAA
rJMFF046F04+ ACATATTTTATTTCGAGCATACAATCGAAAATTG
rJMFF030K10+ ACATATTTTATTTCGAGCATACAATCAAAAATTGAACTGACATGAGATTGTAAT
rJMFF032H08+ AC
rJMFF004B20+ ACATATTTTATTTCGAGCATACAATCAAAAATTGAACTGACATGAGATTGTAATTACAAA
____________________________________________________________
consensus ACATATTTTATTTCGAGCATACAATCAAAAATTGAACTGACATGAGATTGTAATTACAAA
. : . : . : . : . : . :
rJMFF005I14+ ATGCATATGGTATCTGCCAAAACAAAAGCAGGGTGTGGCT
rJMFF031I01+ ATGCATATGGTATCTGCCAAAACAAAAGCAGGGTGTGGCT
rJMFF004B20+ ATGCATATGGTATCTGCCAAAACAAAAGCAGGGTGTGGCTGTCCTACAAATGAGGAGACT
____________________________________________________________
consensus ATGCATATGGTATCTGCCAAAACAAAAGCAGGGTGTGGCTGTCCTACAAATGAGGAGACT