Contig 006776:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF002E03-                        GTGGATTTTGGAATGGCCTCCTCGCATCTTCTTCTTCCTCCACTCTG
JMFF003I18-                     AGTGTGGATTTTGGAATGGCCTCCTCGCATCTTCTTCTTCCTCCACTCTG
                      ____________________________________________________________
consensus                       AGTGTGGATTTTGGAATGGCCTCCTCGCATCTTCTTCTTCCTCCACTCTG
 
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JMSF002E03-           TATATCTCTTTCAGCTCCAGACCATTCCCATTCCAGTAGCCCCAGAAAAGCATTGC-TTT
JMFF003I18-           TATATCTCTTTCAGCTCCAGACCATTCCCATTCCAGTAGCCCCAGAAAAGCATTGC-TTT
rJMSF002E03+                     CAGCTCCAGACCATTCCCATTCCAGTAGCCCCAGAAAAGCATTGCTTTT
                      ____________________________________________________________
consensus             TATATCTCTTTCAGCTCCAGACCATTCCCATTCCAGTAGCCCCAGAAAAGCATTGC-TTT
 
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JMSF002E03-           CCCATTCCAAACACAAACAGGCTATCCAAACCCAGAAGAAGCCAATCAAAGTAAATGCTG
JMFF003I18-           CCCATTCCAAACACAAACAGGCTATCCAAACCCAGAAGAAGCCAATCAAAGTAAATGCTG
rJMSF002E03+          CCCATTCCAAACACAAACAGGCTATCCAAACCCAGAAGAAGCCAATCAAAGTAAATGCTG
rJMFF003I18+                       CAAACAGGCTATCCAAACCCAGAAGAAGCCAATCAAAGTAAATGCTG
                      ____________________________________________________________
consensus             CCCATTCCAAACACAAACAGGCTATCCAAACCCAGAAGAAGCCAATCAAAGTAAATGCTG
 
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JMSF002E03-           GTTTGCAATCCAAGACTGTGAATTTCTTGCTCTCTGGCTCTCTGGCTCTCGCTCTGTCCT
JMFF003I18-           GTTTGCAATCCAAGACTGTGAATTTCTTGCTCTCTGGCTCTCTGGCTCTCGCTCTGTCCT
rJMSF002E03+          GTTTGCAATCCAAGACTGTGAATTTCTTGCTCTCTGGCTCTCTGGCTCTCGCTCTGTCCT
rJMFF003I18+          GTTTGCAATCCAAGACTGTGAATTTCTTGCTCTCTGGCTCTCTGGCTCTCGCTCTGTCCT
                      ____________________________________________________________
consensus             GTTTGCAATCCAAGACTGTGAATTTCTTGCTCTCTGGCTCTCTGGCTCTCGCTCTGTCCT
 
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JMSF002E03-           TCTCAGGAGTTGGATTTGCGGAGGGGAAGGTAGGGGTTAACAAGCCGGAAATGCTTCCTA
JMFF003I18-           TCTCAGGAGTTGGATTTGCGGAGGGGAAGGTAGGGGTTAACAAGCCGGAAATGCTTCCTA
rJMSF002E03+          TCTCAGGAGTTGGATTTGCGGAGGGGAAGGTAGGGGTTAACAAGCCGGAAATGCTTCCTA
rJMFF003I18+          TCTCAGGAGTTGGATTTGCGGAGGGGAAGGTAGGGGTTAACAAGCCGGAAATGCTTCCTA
                      ____________________________________________________________
consensus             TCTCAGGAGTTGGATTTGCGGAGGGGAAGGTAGGGGTTAACAAGCCGGAAATGCTTCCTA
 
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JMSF002E03-           AGGAGTTTACCACTGTTATTGATGTTGCTGGATTTCTCTCAGATGG              
JMFF003I18-           AGGAGTTTACCACTGTTATTGATGTTGCTGGATTTCTCTCAGATGGCCAGGAGAAAAGAC
rJMSF002E03+          AGGAGTTTACCACTGTTATTGATGTTGCTGGATTTCTCTCAGATGGCCAGGAGAAAAGAC
rJMFF003I18+          AGGAGTTTACCACTGTTATTGATGTTGCTGGATTTCTCTCAGATGGCCAGGAGAAAAGAC
                      ____________________________________________________________
consensus             AGGAGTTTACCACTGTTATTGATGTTGCTGGATTTCTCTCAGATGGCCAGGAGAAAAGAC
 
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JMFF003I18-           TTGCACAGGAGATTGCAGATATCGAAAAGGATACTGGATTCAAGTTGAGAGTTTTGGCTC
rJMSF002E03+          TTGCACAGGAGATTGCAGATATCGAAAAGGATACTGGATTCAAGTTGAGAGTTTTGGCTC
rJMFF003I18+          TTGCACAGGAGATTGCAGATATCGAAAAGGATACTGGATTCAAGTTGAGAGTTTTGGCTC
                      ____________________________________________________________
consensus             TTGCACAGGAGATTGCAGATATCGAAAAGGATACTGGATTCAAGTTGAGAGTTTTGGCTC
 
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JMFF003I18-           AGAACTACCCTGAAACGCCAGGATTAGCAATCAAGGATTTCTGGGAAGTGGATGACAGGA
rJMSF002E03+          AGAACTACCCTGAAACGCCAGGATTAGCAATCAAGGATTTCTGGGAAGTGGATGACAGGA
rJMFF003I18+          AGAACTACCCTGAAACGCCAGGATTAGCAATCAAGGATTTCTGGGAAGTGGATGACAGGA
                      ____________________________________________________________
consensus             AGAACTACCCTGAAACGCCAGGATTAGCAATCAAGGATTTCTGGGAAGTGGATGACAGGA
 
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JMFF003I18-           CTATAGTCTTCGTTGCTGATCCTACTTTTGGCAACATACTAAACTTCAATGTTGGAGCGT
rJMSF002E03+          CTATAGTCTTCGTTGCTGATCCTACTTTTGGCAACATACTAAACTTCAATGTTGGAGCGT
rJMFF003I18+          CTATAGTCTTCGTTGCTGATCCTACTTTTGGCAACATACTAAACTTCAATGTTGGAGCGT
                      ____________________________________________________________
consensus             CTATAGTCTTCGTTGCTGATCCTACTTTTGGCAACATACTAAACTTCAATGTTGGAGCGT
 
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JMFF003I18-           CTGTGGATCTAGACATTCCGCGTAGCTTCTGGAGCCGTTTGGCTGGAAAATATGGGAACA
rJMSF002E03+          CTGTGGATCTAGACATTCCGCGTAGCTTCTGGAGCCGTTTGGCTGGGAAATATGGGAACA
rJMFF003I18+          CTGTGGATCTAGACATTCCGCGTAGCTTCTGGAGCCGTTTGGCTGGAAAATATGGGAACA
                      ____________________________________________________________
consensus             CTGTGGATCTAGACATTCCGCGTAGCTTCTGGAGCCGTTTGGCTGGAAAATATGGGAACA
 
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JMFF003I18-           TATTTTATTGGAAGGA                                            
rJMSF002E03+          TATTTTATTGGAAGGAAAAGGGTGAAGATGCGTCTATTGAATCTGCTGTTATGGCAATAT
rJMFF003I18+          TATTTTATTGGAAGGAAAAGGGTGAAGATGCGTCTATTGAATCTGCTGTTATGGCAATAT
                      ____________________________________________________________
consensus             TATTTTATTGGAAGGAAAAGGGTGAAGATGCGTCTATTGAATCTGCTGTTATGGCAATAT
 
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rJMSF002E03+          CAGCCTGCTTGAGAGAACCAGTGGGCGCAAATAATTGCTCAGAGGTAAAGTAATTCCATG
rJMFF003I18+          CAGCCTGCTTGAGAGAACCAGTGGGCGCAAATAATTGCTCAGAGGTAAAGTAATTCCATG
                      ____________________________________________________________
consensus             CAGCCTGCTTGAGAGAACCAGTGGGCGCAAATAATTGCTCAGAGGTAAAGTAATTCCATG
 
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rJMSF002E03+          ATTTTGCAATGCATGTTAGGATGTGATGTAGATTTCCATGTCATTTGAAGCAATATATAG
rJMFF003I18+          ATTTTGCAATGCATGTTAGGATGTGATGTAGATTTCCATGTCATTTGAAGCAATATATAG
                      ____________________________________________________________
consensus             ATTTTGCAATGCATGTTAGGATGTGATGTAGATTTCCATGTCATTTGAAGCAATATATAG
 
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rJMSF002E03+          TTAATTATTTTCTTCAAACTTAAACGAGAAAGCACATTTAGTT                 
rJMFF003I18+          TTAATTATTTTCTTCAAACTTAAACGAGAAAGCACATTTAGTTAGTTATTCTACAAGACT
                      ____________________________________________________________
consensus             TTAATTATTTTCTTCAAACTTAAACGAGAAAGCACATTTAGTTAGTTATTCTACAAGACT