Contig 006755:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF011I10+                                                        TTGCCATGTGACATG
                      ____________________________________________________________
consensus                                                          TTGCCATGTGACATG
 
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JMSF011I10+           ACAATACTTACAAGCTTTTCTTCGCTTAAGCTAACACGTCGTACCTTATCAGGATCTGCA
                      ____________________________________________________________
consensus             ACAATACTTACAAGCTTTTCTTCGCTTAAGCTAACACGTCGTACCTTATCAGGATCTGCA
 
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JMSF011I10+           TTTATCCACTCCTCGACTTTACCCTTAGTTTTCCCTCCCTGGATTGCAATCAAACGCTTG
JMSF030A17+                        CGACTTTACCCTTAGTTTTCCCTCCCTGGATTGCAATCAAACGCTTG
                      ____________________________________________________________
consensus             TTTATCCACTCCTCGACTTTACCCTTAGTTTTCCCTCCCTGGATTGCAATCAAACGCTTG
 
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JMSF011I10+           TATTCGGGTGCAGCATTNGGCTGCACACCATGATTTGAATGATGGGAATCGTCGTCTTCT
JMSF030A17+           TATTCGGGTGCAGCATTTGGCTGCACACCATGATTTGAATGATGGGAATCGTCGTCTTCT
                      ____________________________________________________________
consensus             TATTCGGGTGCAGCATTTGGCTGCACACCATGATTTGAATGATGGGAATCGTCGTCTTCT
 
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JMSF011I10+           GCACACTCGTGATCTGCAGCATCCTCTTTGTTATTCTCATATAGGGCTTTGAATTTATGT
JMSF030A17+           GCACACTCGTGATCTGCAGCATCCTCTTTGTTATTCTCATATAGGGCTTTGAATTTATGT
                      ____________________________________________________________
consensus             GCACACTCGTGATCTGCAGCATCCTCTTTGTTATTCTCATATAGGGCTTTGAATTTATGT
 
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JMSF011I10+           GATAGGTCTGAAATTTCCTGTCCCCATGCATTTTCCTCTGAAGAAGCACTTTTTGTGCTG
JMSF030A17+           GATAGGTCTGAAATTTCCTGTCCCCATGCATTTTCCTCTGAAGAAGCACTTTTTGTGCTG
                      ____________________________________________________________
consensus             GATAGGTCTGAAATTTCCTGTCCCCATGCATTTTCCTCTGAAGAAGCACTTTTTGTGCTG
 
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JMSF011I10+           TGGGAATTACTGTTATCTTTGTCTTTCAGAGACTTAGTTTCCTGATATTCTACAGGTGGT
JMSF030A17+           TGGGAATTACTGTTATCTTTGTCTTTCAGAGACTTAGTTTCCTGATATTCTACAGGTGGT
                      ____________________________________________________________
consensus             TGGGAATTACTGTTATCTTTGTCTTTCAGAGACTTAGTTTCCTGATATTCTACAGGTGGT
 
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JMSF011I10+           TTTGTTGAAATTATTATTTTTCGCTTCAATGATTCCGGGGAAGGAAATTCTTCCAAACAT
JMSF030A17+           TTTGTTGAAATTATTATTTTTCGCTTCAATGATTCCGGGGAAGGAAATTCTTCCAAACAT
                      ____________________________________________________________
consensus             TTTGTTGAAATTATTATTTTTCGCTTCAATGATTCCGGGGAAGGAAATTCTTCCAAACAT
 
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JMSF011I10+           TCTGATCCAGGAGCGAAAAGAACGTCCCC                               
JMSF030A17+           TCTGATCCAGGAGCGAAAAGAACGTCCCCAAACGTTTGAGAGACCATCTCTGCAACTTTA
                      ____________________________________________________________
consensus             TCTGATCCAGGAGCGAAAAGAACGTCCCCAAACGTTTGAGAGACCATCTCTGCAACTTTA
 
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JMSF030A17+           GCCTGAAGATCTGGGGTGAGGTGATCTTCTAGAGTGATAATAACCGGATATTCAGACGAT
                      ____________________________________________________________
consensus             GCCTGAAGATCTGGGGTGAGGTGATCTTCTAGAGTGATAATAACCGGATATTCAGACGAT
 
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JMSF030A17+           ATGAAAGCATGCTCCCGGATTGATTTCAAGCACTTGATGAGCTCCACTGGAGTTGTAAGT
                      ____________________________________________________________
consensus             ATGAAAGCATGCTCCCGGATTGATTTCAAGCACTTGATGAGCTCCACTGGAGTTGTAAGT
 
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JMSF030A17+           GTCCCTCCATGAAGAATATCAACATTGTTCTTGGAGGAATTCGGCCACATATCGAGCTCA
JMSF019A12+                                             AGGAATTCGGCCACATATCGAGCTCA
JMSF015G12+             CCCTCCATGAAGAATATCAACATTGTTCTTGGAGGAATTCGGCCACATATCGAGCTCA
JMSF052D11+             CCCTCCATGAAGAATATCAACATTGTTCTTGGAGGAATTCGGCCACATATCGAGCTCA
                      ____________________________________________________________
consensus             GTCCCTCCATGAAGAATATCAACATTGTTCTTGGAGGAATTCGGCCACATATCGAGCTCA
 
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JMSF030A17+           ATCACCCTAACACCGCGCTCCAGAGCTTTTATAATTGGCACGTCGCTACAATC       
JMSF019A12+           ATCACCCTAACACCGCGCTCCAGAGCTTTTATAATTGGCACGTCGCTACAATCGCTGTTT
JMSF015G12+           ATCACCCTAACACCGCGCTCCAGAGCTTTTATAATTGGCACGTCGCTACAATCGCTGTTT
JMSF052D11+           ATCACCCTAACACCGCGCTCCAGAGCTTTTATAATTGGCACGTCGCTACAATCGCTGTTT
                      ____________________________________________________________
consensus             ATCACCCTAACACCGCGCTCCAGAGCTTTTATAATTGGCACGTCGCTACAATCGCTGTTT
 
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JMSF019A12+           AACTGGTTCCCAGTTAGGTAGGTATTATGGCTAGTGTATATGAAATAATGTGACAATGGA
JMSF015G12+           AACTGGTTCCCAGTTAGGTAGGTATTATGGCTAGTGTATATGAAATAATGTGACAATGGA
JMSF052D11+           AACTGGTTCCCAGTTAGGTAGGTATTATGGCTAGNGTATATGAAATAATGTGACAATGGA
                      ____________________________________________________________
consensus             AACTGGTTCCCAGTTAGGTAGGTATTATGGCTAGTGTATATGAAATAATGTGACAATGGA
 
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JMSF019A12+           GCATTCATATCATGATGCACCTTATTAGCAGGGGGAAGAGGAGAGTTTGTCTCACTGAAA
JMSF015G12+           GCATTCATATCATGATGCACCTTATTAGCAGGGGGAAGAGGAGAGTTTGTCTCACTGAAA
JMSF052D11+           GCNTTCATATCNTGATGCNCCTTATTAGCAGGGGGAAGAGGAGAGTTTGTCTCNCTGAAA
                      ____________________________________________________________
consensus             GCATTCATATCATGATGCACCTTATTAGCAGGGGGAAGAGGAGAGTTTGTCTCACTGAAA
 
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JMSF019A12+           AGGAATCGAAAGAACGATTCGAGATTGAGGCCTTTGCTGCGATGGAACACATGGAGATGC
JMSF015G12+           AGGAATCGAAAGAACGATTCGAGATTGAGGCCTTTGCTGCGATGGAACACATGGAGATGC
JMSF052D11+           AGGAATCGAAAGAACGATTCGAGATTGAGGCCTTTGCTGCGATGGAACACANGGAGATGC
                      ____________________________________________________________
consensus             AGGAATCGAAAGAACGATTCGAGATTGAGGCCTTTGCTGCGATGGAACACATGGAGATGC
 
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JMSF019A12+           TCAAGGGACTTGAGTGCAGCCTCCATTATAGTCTCAGCTTCTTCCTTAGAAACCCTTTCT
JMSF015G12+           TCAAGGGACTTGAGTGCAGCCTCCATTATAGTCTCAGCTTCTTCCTTAGAAACCCTTTCT
JMSF052D11+           TCAAGGGACTTGAGTGCAGCCTCCNTTATAGTNTCAGCTTNTTCCTTAGAAACCCTTTNT
                      ____________________________________________________________
consensus             TCAAGGGACTTGAGTGCAGCCTCCATTATAGTCTCAGCTTCTTCCTTAGAAACCCTTTCT
 
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JMSF019A12+           TCTCCCTGAACTTCCTTCAGGAACTTGTGCAGATGCTCCGCACTCATCATTCCATTCTCC
JMSF015G12+           TCTCCCTGAACTTCCTTCAGGAACTTGTGCAGATGCTCCGCACTCATCATTCCATTCTCC
JMSF052D11+           TCTCCCTGAACTTCCTTCAGGAACTTGNGCAGATGCTCCGCACTCATCATTCCNTTNTCC
                      ____________________________________________________________
consensus             TCTCCCTGAACTTCCTTCAGGAACTTGTGCAGATGCTCCGCACTCATCATTCCATTCTCC
 
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JMSF019A12+           GAAAATCTGCCAAACAGGGCCTTGATCTCATCTGGTGGCTCAGCATCTCTCAGCTTGAAC
JMSF015G12+           GAAAATCTGCCAAACAGGGCCTTGATCTCATCTGGTGGCTCAGCATCTCTCAGCTTGAAC
JMSF052D11+           GAAAATNTGCCAAACAGGGCCTTGATNTCATNTGGTGGCTCAGCATCTNTCAGCTTGAAC
                      ____________________________________________________________
consensus             GAAAATCTGCCAAACAGGGCCTTGATCTCATCTGGTGGCTCAGCATCTCTCAGCTTGAAC
 
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JMSF019A12+           TTTCTCGAGAAACAGCAGATTCTGTAAGTTTGCTTC                        
JMSF015G12+           TTT                                                         
JMSF052D11+           TTTCTCGAGAAACAGCAGATTCTGTAAGTTTGCTTCGACATTTTTTTTTTTGGGATTCTC
                      ____________________________________________________________
consensus             TTTCTCGAGAAACAGCAGATTCTGTAAGTTTGCTTCGACATTTTTTTTTTTGGGATTCTC