Contig 006754:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026L02Sequence668006754 (3)ref|XP_009625334.1|2e-07PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'748008547 (4)gb|KDO52089.1|3e-52hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]
JMSF028D04Sequence695006754 (3)ref|XP_009625334.1|7e-10PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'688008547 (4)gb|KDO52089.1|2e-64hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]
JMSF052A13Sequence668006754 (3)ref|XP_009625334.1|2e-09PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'814008547 (4)gb|KDO52089.1|6e-64hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF028D04+ ACCCCGCGGT
JMSF052A13+ CCCGCGGT
                      ____________________________________________________________
consensus ACCCCGCGGT
 
. : . : . : . : . : . :
JMSF028D04+ AGAATNGGAATTGACCCCTGCAAGAGACGTAGCATTCAAACTCCCTGACCGCAAACCTGA
JMSF026L02+ TGCAAGAGACGTAGCATTCAAACTCCCTGACCGCAAACCTGA
JMSF052A13+ AGAATTGGAATTGACCCCTGCAAGAGACGTAGCATTCAAACTCCCTGACCGCAAACCTGA
                      ____________________________________________________________
consensus AGAATTGGAATTGACCCCTGCAAGAGACGTAGCATTCAAACTCCCTGACCGCAAACCTGA
 
. : . : . : . : . : . :
JMSF028D04+ CAAGTCACTGCTTCTTGAACTAGAAGAAGCATTAGGAGGAAAAGTAGAGGTTCCCCCATC
JMSF026L02+ CAAGTCACTGCTTCTTGAACTAGAAGAAGCATTAGGAGGAAAAGTAGAGGTTCCCCCATC
JMSF052A13+ CAAGTCACTGCTTCTTGAACTAGAAGAAGCATTAGGAGGAAAAGTAGAGGTTCCCCCATC
                      ____________________________________________________________
consensus CAAGTCACTGCTTCTTGAACTAGAAGAAGCATTAGGAGGAAAAGTAGAGGTTCCCCCATC
 
. : . : . : . : . : . :
JMSF028D04+ ACGATTGTCAGCTGACTTTGAGGGCTTCCGTGGGAGTCTGTTGAGTATCTGTTTGATCAT
JMSF026L02+ ACGATTGTCAGCTGACTTTGAGGGCTTCCGTGGGAGTCTGTTGAGTATCTGTTTGATCAT
JMSF052A13+ ACGATTGTCAGCTGACTTTGAGGGCTTCCGTGGGAGTCTGTTGAGTATCTGTTTGATCAT
                      ____________________________________________________________
consensus ACGATTGTCAGCTGACTTTGAGGGCTTCCGTGGGAGTCTGTTGAGTATCTGTTTGATCAT
 
. : . : . : . : . : . :
JMSF028D04+ CACTGGGAACTACAGGATTAAGTTCACTTCAAGTAATCCTAACAGGTATGTTGATTGAAT
JMSF026L02+ CACTGGGAACTACAGGATTAAGTTCACTTCAAGTAATCCTAACAGGTATGTTGATTGAAT
JMSF052A13+ CACTGGGAACTACAGGATTAAGTTCACTTCAAGTAATCCTAACAGGTATGTTGATTGAAT
                      ____________________________________________________________
consensus CACTGGGAACTACAGGATTAAGTTCACTTCAAGTAATCCTAACAGGTATGTTGATTGAAT
 
. : . : . : . : . : . :
JMSF028D04+ AGCTTACAACAGAGTGCAAACCACAAATGATAATAACATTTGCAGCAACAATCAGGAAAT
JMSF026L02+ AGCTTACAACAGAGTGCAAACCACAAATGATAATAACATTTGCAGCAACAATCAGGAAAT
JMSF052A13+ AGCTTACAACAGAGTGCAAACCACAAATGATAATAACATTTGCAGCAACAATCAGGAAAT
                      ____________________________________________________________
consensus AGCTTACAACAGAGTGCAAACCACAAATGATAATAACATTTGCAGCAACAATCAGGAAAT
 
. : . : . : . : . : . :
JMSF028D04+ CAACCCAATCAAACCTGCTAACAGCAACCCAGTGAGGATCTAATCACCTCATAGGCTCTC
JMSF026L02+ CAACCCAATCAAACCTGCTAACAGCAACCCAGTGAGGATCTAATCACCTCATAGGCTCTC
JMSF052A13+ CAACCCAATCAAACCTGCTAACAGCAACCCAGTGAGGATCTAATCACCTCATAGGCTCTC
                      ____________________________________________________________
consensus CAACCCAATCAAACCTGCTAACAGCAACCCAGTGAGGATCTAATCACCTCATAGGCTCTC
 
. : . : . : . : . : . :
JMSF028D04+ TGTGTTCCTGACCAACAGAATCCAACATCCACAGTCTATGAATTCAAGTTCTTGTTCTTC
JMSF026L02+ TGTGTTCCTGACCAACAGAATCCAACATCCACAGTCTATGAATTCAAGTTCTTGTTCTTC
JMSF052A13+ TGTGTTCCTGACCAACAGAATCCAACATCCACAGTCTATGAATTCAAGTTCTTGTTCTTC
                      ____________________________________________________________
consensus TGTGTTCCTGACCAACAGAATCCAACATCCACAGTCTATGAATTCAAGTTCTTGTTCTTC
 
. : . : . : . : . : . :
JMSF028D04+ TA-TCTAAGTGAAAAAATCCCTTCCTTATCT
JMSF026L02+ TACTCTAAGTGAAAAAATCCCTTCCTTATCT
JMSF052A13+ TACTCTAAGTGAAAAAATCCCTTCCTTATCTCAGTTCTCTTCAGCTAGATCAAAGGATTA
                      ____________________________________________________________
consensus TACTCTAAGTGAAAAAATCCCTTCCTTATCTCAGTTCTCTTCAGCTAGATCAAAGGATTA
 
. : . : . : . : . : . :
JMSF052A13+ CAAGATCTGAGGCATGATCTATGAAACCCAGCAAACATTCTTCATCAGAAAACCACAAGG
                      ____________________________________________________________
consensus CAAGATCTGAGGCATGATCTATGAAACCCAGCAAACATTCTTCATCAGAAAACCACAAGG
 
. : . : . : . : . : . :
JMSF052A13+ AGCTAAAAGACGGTAATGATAAGAAAAGAAAAGTTAAGGATGGAGGCCTCCGAGTTGGGT
                      ____________________________________________________________
consensus AGCTAAAAGACGGTAATGATAAGAAAAGAAAAGTTAAGGATGGAGGCCTCCGAGTTGGGT
 
. : . : . : . : . : . :
JMSF052A13+ CAGTGATCGAAATCCGAAAACCGGCCAAGAGAGTAGAAAAGCAATCTCTGGTTGTTGTTC
                      ____________________________________________________________
consensus CAGTGATCGAAATCCGAAAACCGGCCAAGAGAGTAGAAAAGCAATCTCTGGTTGTTGTTC