Contig 006726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015E06Sequence513006726 (3)ref|XP_009608020.1|8e-84PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana tomentosiformis]725012765 (3)ref|XP_009778099.1|3e-113PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana sylvestris]
JMSF030H12Sequence654006726 (3)ref|XP_009608020.1|1e-90PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana tomentosiformis]721012765 (3)ref|XP_009778099.1|8e-118PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana sylvestris]
JMSF048H18Sequence705006726 (3)ref|XP_009608020.1|2e-125PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana tomentosiformis]772012765 (3)ref|XP_009778099.1|7e-125PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF048H18+                         AATGTACACCAAAANCAGTGTTGGCAAAGAGTGTGCCAAAAAATAT
                      ____________________________________________________________
consensus                           AATGTACACCAAAANCAGTGTTGGCAAAGAGTGTGCCAAAAAATAT
 
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JMSF030H12+                 CATCCACCAGNTGAAGAATGAGAGCTTGTGACCTTTCTCCTNGGGGTCATGCTC
JMSF048H18+           GCTAAACATCCACCAGTTGAAGAATGAGAGCTTGTGACCTTTCTCCTTGGGGTCATGCTC
                      ____________________________________________________________
consensus             GCTAAACATCCACCAGTTGAAGAATGAGAGCTTGTGACCTTTCTCCTTGGGGTCATGCTC
 
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JMSF030H12+           GTCGAATTGGTCGGCGCCAATCGTTGATATGTTGGGCTTCGTGCCCCCGGTGCCGATGGC
JMSF048H18+           GTCGAATTGGTCGGCGCCAATCGTTGATATGTTGGGCTTCGTGCCCCCGGTGCCGATGGC
                      ____________________________________________________________
consensus             GTCGAATTGGTCGGCGCCAATCGTTGATATGTTGGGCTTCGTGCCCCCGGTGCCGATGGC
 
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JMSF030H12+           TAAGGTGTAGAGTGCCCCGAAAAAGGACGGCCAGTTGCAATGTGGTTGCCTTTGGACAGT
JMSF015E06+                                      CGGCCAGTTGCAATGTGGTTGCCTTNGGACAGT
JMSF048H18+           TAAGGTGTAGAGTGCCCCGAAAAA-GACGGCCAGTTGCAATGTGGTTGCCTTTGGACAGT
                      ____________________________________________________________
consensus             TAAGGTGTAGAGTGCCCCGAAAAAGGACGGCCAGTTGCAATGTGGTTGCCTTTGGACAGT
 
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JMSF030H12+           CGGCCGCATTCGGGTCGGAACAATGGGGAGGCTTTAGGCCATGGATGGATACCGCTAGTG
JMSF015E06+           CGGCCGCATTCGGGTCGGAACAATGGGGAGGCTTTAGGCCATGGATGGATACCGCTAGTG
JMSF048H18+           CGGCCGCATTCGGGTCGGAACAATGGGGAGGCTTTAGGCCATGGATGGATACCGCTAGTG
                      ____________________________________________________________
consensus             CGGCCGCATTCGGGTCGGAACAATGGGGAGGCTTTAGGCCATGGATGGATACCGCTAGTG
 
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JMSF030H12+           TCAATAGACCCATTCCCGAAAGATAAATAGCACAGGCGATTAAGAAAGTCCAGTAACGAC
JMSF015E06+           TCAATAGACCCATTCCCGAAAGATAAATAGCACAGGCGATTAAGAAAGTCCAGTAACGAC
JMSF048H18+           TCAATAGACCCATTCCCGAAAGATAAATAGCACAGGCGATTAAGAAAGTCCAGTAACGAC
                      ____________________________________________________________
consensus             TCAATAGACCCATTCCCGAAAGATAAATAGCACAGGCGATTAAGAAAGTCCAGTAACGAC
 
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JMSF030H12+           CGAGAAAAGCGTCGGCCACGTAGGCACCCAAGATTGGGGTCATCCAAATGGTGCCAACCC
JMSF015E06+           CGAGAAAAGCGTCGGCCACGTAGGCACCCAAGATTGGGGTCATCCAAATGGTGCCAACCC
JMSF048H18+           CGAGAAAAGCGTCGGCCACGTAGGCACCCAAGATTGGGGTCATCCAAATGGTGCCAACCC
                      ____________________________________________________________
consensus             CGAGAAAAGCGTCGGCCACGTAGGCACCCAAGATTGGGGTCATCCAAATGGTGCCAACCC
 
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JMSF030H12+           AATTTGTAACATTGTTGGCTGATTTCACAGTGCCTTGATGCAGCTTCTGGGTTAAGTATA
JMSF015E06+           AATTTGTAACATTGTTGGCTGATTTCACAGTGCCTTGATGCAGCTTCTGGGTTAAGTATA
JMSF048H18+           AATTTGTAACATTGTTGGCTGATTTCACAGTGCCTTGATGCAGCTTCTGGGTTAAGTATA
                      ____________________________________________________________
consensus             AATTTGTAACATTGTTGGCTGATTTCACAGTGCCTTGATGCAGCTTCTGGGTTAAGTATA
 
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JMSF030H12+           GAACCAAGTTTGATGAGATCCCATAATATGCCATTCGTTCAAATACTTCGTATACAACAA
JMSF015E06+           GAACCAAGTTTGATGAGATCCCATAATATGCCATTCGTTCAAATACTTCGTATACAACAA
JMSF048H18+           GAACCAAGTTTGATGAGATCCCATAATATGCCATTCGTTCAAATACTTCGTATACAACAA
                      ____________________________________________________________
consensus             GAACCAAGTTTGATGAGATCCCATAATATGCCATTCGTTCAAATACTTCGTATACAACAA
 
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JMSF030H12+           CAAAGGAACAGGCAGTCCAGCCACCTCTCTTGGATCGAAGAACAGGGTTGCCCCTGAGGT
JMSF015E06+           CAAAGGAACAGGCAGTCCAGCCACCTCTCTTGGATCGAAGAACAGGGTTGCCCCTGAGGT
JMSF048H18+           CAAAGGAACAGGCAGTCCAGCCACCTCTCTTGGATCGAAGAACAGGGTTGCCCCTGAGGT
                      ____________________________________________________________
consensus             CAAAGGAACAGGCAGTCCAGCCACCTCTCTTGGATCGAAGAACAGGGTTGCCCCTGAGGT
 
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JMSF030H12+           CAACTGTTCCATCTTTTGTGTAACCATCATCAACCCCTTTCTCTTCTACACTTGCCATAT
JMSF015E06+           CAACTGTTCCATCTTTTGTGTAACCATCATCAACCCCTTTCTCTTNTACACTTGCCATAT
JMSF048H18+           CAACTGTTCCATCTTTTGTGTAACCATCATCAACCCCTTTCTCTTCTACACTTGCCATAT
                      ____________________________________________________________
consensus             CAACTGTTCCATCTTTTGTGTAACCATCATCAACCCCTTTCTCTTCTACACTTGCCATAT
 
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JMSF030H12+           ATATAGATATGTGTATATATACACAGCCAGTTTCTTACTTTTAAAGTGTTTGCTATGGCC
JMSF015E06+           ATATAGATATGTGTATATATACACAGCCAGTTTCTTACTTTTAAAGTGTTTGCTATGGCC
JMSF048H18+           ATATAGATATGTGTATATATACACAGCCAGTTTCTTACTTTTAAAGTGTTTGCTATGGCC
                      ____________________________________________________________
consensus             ATATAGATATGTGTATATATACACAGCCAGTTTCTTACTTTTAAAGTGTTTGCTATGGCC