| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006D02 | Sequence | 552 | 006722 (6) | ref|XP_011101485.1| | 2e-63 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] | 717 | 006722 (6) | ref|XP_011101485.1| | 1e-103 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] |
| JMSF036E08 | Sequence | 640 | 006722 (6) | ref|XP_011101485.1| | 6e-89 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] | 715 | 006722 (6) | gb|KCW89258.1| | 8e-73 | hypothetical protein EUGRSUZ_A01555, partial [Eucalyptus grandis] |
| JMSF048E17 | Sequence | 672 | 006722 (6) | ref|XP_011101485.1| | 5e-96 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] | 676 | 006722 (6) | ref|XP_011101485.1| | 2e-105 | PREDICTED: peroxiredoxin-2E-1, chloroplastic [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF036E08- CAATTCTGTAGCAATTCTTTTGATCTAACTACAATCCAAACAGCCAA
____________________________________________________________
consensus CAATTCTGTAGCAATTCTTTTGATCTAACTACAATCCAAACAGCCAA
. : . : . : . : . : . :
rJMSF036E08- ATGCTAACACATTTAAAAGCATCCCTAAAAGGCTAAATCCCAATTAACAAGAAGTTGCCA
____________________________________________________________
consensus ATGCTAACACATTTAAAAGCATCCCTAAAAGGCTAAATCCCAATTAACAAGAAGTTGCCA
. : . : . : . : . : . :
rJMSF036E08- CTGTTCAGAATTAGCTCAGATTAGACAGTACTAATCAATCACAGAAACACATTGGTTTAG
____________________________________________________________
consensus CTGTTCAGAATTAGCTCAGATTAGACAGTACTAATCAATCACAGAAACACATTGGTTTAG
. : . : . : . : . : . :
rJMSF036E08- AACATAAAAGACAGGCAATAGAACATAGCAATTGAAGTATTTAGAACAGAAAAGACAGGT
rJMFF006D02- TAGCAATTGAAGTATTTAGAACAGAAAAGACAGGT
____________________________________________________________
consensus AACATAAAAGACAGGCAATAGAACATAGCAATTGAAGTATTTAGAACAGAAAAGACAGGT
. : . : . : . : . : . :
rJMSF036E08- AAACTCTATAGTGGATTGTATCCATATTATTGATCATATTATCCTCATAAACAGCATCGA
rJMFF006D02- AAACTCTATAGTGGATTGTATCCATATTATTGATCATATTATCCTCATAAACAGCATCGA
rJMSF048E17- ACAGCATCGA
____________________________________________________________
consensus AAACTCTATAGTGGATTGTATCCATATTATTGATCATATTATCCTCATAAACAGCATCGA
. : . : . : . : . : . :
rJMSF036E08- AATTCAATTCCCTCAAGAGTCAAGAAAAGCAGCAAAATGTAGAGGAAAAAGAAACCTCTA
rJMFF006D02- AATTCAATTCCCTCAAGAGTCAAGAAAAGCAGCAAAATGTAGAGGAAAAAGAAACCTCTA
rJMSF048E17- AATTCAATTCCCTCAAGAGTCAAGAAAAGCAGCAAAATGTAGAGGAAAAAGAAACCTCTA
____________________________________________________________
consensus AATTCAATTCCCTCAAGAGTCAAGAAAAGCAGCAAAATGTAGAGGAAAAAGAAACCTCTA
. : . : . : . : . : . :
rJMSF036E08- GAGGGCCTTGAGCATATCCTCAGCACTGCTGGAAGTGAAAGCTCCGCCTTCCTCCAAGTT
rJMFF006D02- GAGGGCCTTGAGCATATCCTCAGCACTGCTGGAAGTGAAAGCTCCGCCTTCCTCCAAGTT
rJMSF048E17- GAGGGCCTTGAGCATATCCTCAGCACTGCTGGAAGTGAAAGCTCCGCCTTCCTCCAAGTT
JMSF048E17+ TTCCTCCAAGTT
____________________________________________________________
consensus GAGGGCCTTGAGCATATCCTCAGCACTGCTGGAAGTGAAAGCTCCGCCTTCCTCCAAGTT
. : . : . : . : . : . :
rJMSF036E08- CAAGACCTTCACAACTCCATCTTCCACGAGCATGGCGTACCGCCTAGACCTCACGCCGAG
rJMFF006D02- CAAGACCTTCACAACTCCATCTTCCACGAGCATGGCGTACCGCCTAGACCTCACGCCGAG
rJMSF048E17- CAAGACCTTCACAACTCCATCTTCCACGAGCATGGCGTACCGCCTAGACCTCACGCCGAG
JMSF036E08+ ATCTTCCACGAGCATGGCGTACCGCCTAGACCTCACGCCGAG
JMSF048E17+ CAAGACCTTCACAACTCCATCTTCCACGAGCATGGCGTACCGCCTAGACCTCACGCCGAG
____________________________________________________________
consensus CAAGACCTTCACAACTCCATCTTCCACGAGCATGGCGTACCGCCTAGACCTCACGCCGAG
. : . : . : . : . : . :
rJMSF036E08- CCCGACGGGCTTGTCAGTGAGGTCAAGCTCGCACCCAATCGCCTTGGTGAACTCCCCATT
rJMFF006D02- CCCGACGGGCTTGTCAGTGAGGTCAAGCTCGCACCCAATCGCCTTGGTGAACTCCCCATT
rJMSF048E17- CCCGACGGGCTTGTCAGTGAGGTCAAGCTCGCACCCAATCGCCTTGGTGAACTCCCCATT
JMSF036E08+ CCCGACGGGCTTGTCAGTGAGGTCAAGCTCGCACCCAATCGCCTTGGTGAACTCCCCATT
JMSF048E17+ CCCGACGGGCTTGTCAGTGAGGTCAAGCTCGCACCCAATCGCCTTGGTGAACTCCCCATT
____________________________________________________________
consensus CCCGACGGGCTTGTCAGTGAGGTCAAGCTCGCACCCAATCGCCTTGGTGAACTCCCCATT
. : . : . : . : . : . :
rJMSF036E08- CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
rJMFF006D02- CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
rJMSF048E17- CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
JMSF036E08+ CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
JMFF006D02+ CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
JMSF048E17+ CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
____________________________________________________________
consensus CCCGTCGCTCAGCAGCAAGACTTCATCTTTGACCCCCAGATTCTCCTTCCAGGCCTTCAT
. : . : . : . : . : . :
rJMSF036E08- CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
rJMFF006D02- CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
rJMSF048E17- CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
JMSF036E08+ CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
JMFF006D02+ CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
JMSF048E17+ CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
____________________________________________________________
consensus CACGAACGCGTCGTTGACCGATATGCAGGCGATGGTGTCCACGCCCTTGGCCTTGATCTC
. : . : . : . : . : . :
rJMSF036E08- CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
rJMFF006D02- CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
rJMSF048E17- CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
JMSF036E08+ CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
JMFF006D02+ CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
JMSF048E17+ CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
____________________________________________________________
consensus CGACGCCTTCTCGACGAACCCGGGGAGGTGCTTCTGGGAGCAGGTGGGGGTGAATGCGCC
. : . : . : . : . : . :
rJMSF036E08- CGGGACGG
rJMFF006D02- CGGGACGGCGAAGAGGATGGCCTTCTTGCCGGCAGTGAGGTCCGAGATGGAAACGGTCTG
rJMSF048E17- CGGGACGGCGAAGAGGATGGCCTTCTTGCCGGCAGTGAGGTCCGAGATGGAAACGGTCTG
JMSF036E08+ CGGGACGGCGAAGAGGATGGCCTTCTTGCCGGCAGTGAGGTCCGAGATGGAAACGGTCTG
JMFF006D02+ CGGGACGGCGAAGAGGATGGCCTTCTTGCCGGCAGTGAGGTCCGAGATGGAAACGGTCTG
JMSF048E17+ CGGGACGGCGAAGAGGATGGCCTTCTTGCCGGCAGTGAGGTCCGAGATGGAAACGGTCTG
____________________________________________________________
consensus CGGGACGGCGAAGAGGATGGCCTTCTTGCCGGCAGTGAGGTCCGAGATGGAAACGGTCTG
. : . : . : . : . : . :
rJMFF006D02- GAGGTCGTCGGAGGATTCGAAGAAGGAGAGAGTCGCGTCGGGGAGCTTGTCGCCGACGGA
rJMSF048E17- GAGGTCGTCGGAGGATTCGAAGAAGGAGAGAGTCGCGTCGGGGAGCTTGTCGCCGACGGA
JMSF036E08+ GAGGTCGTCGGAGGATTCGAAGAAGGAGAGAGTCGCGTCGGGGAGCTTGTCGCCGACGGA
JMFF006D02+ GAGGTCGTCGGAGGATTCGAAGAAGGAGAGAGTCGCGTCGGGGAGCTTGTCGCCGACGGA
JMSF048E17+ GAGGTCGTCGGAGGATTCGAAGAAGGAGAGAGTCGCGTCGGGGAGCTTGTCGCCGACGGA
____________________________________________________________
consensus GAGGTCGTCGGAGGATTCGAAGAAGGAGAGAGTCGCGTCGGGGAGCTTGTCGCCGACGGA
. : . : . : . : . : . :
rJMFF006D02- GATAGCGGCGGAGATTTTGGGAGCGGTGGAGAATCTAAGTGCGCCGGGGTAGCGGCGGCG
rJMSF048E17- GATAGCGGCGGAGATTTTGGGAGCGGTGGAGAATCTAAGTGCGCCGGGGTAGCGGCGGCG
JMSF036E08+ GATAGCGGCGGAGATTTTGGGAGCGGTGGAGAATCTAAGTGCGCCGGGGTAGCGGCGGCG
JMFF006D02+ GATAGCGGCGGAGATTTTGGGAGCGGTGGAGAATCTAAGTGCGCCGGGGTAGCGGCGGCG
JMSF048E17+ GATAGCGGCGGAGATTTTGGGAGCGGTGGAGAATCTAAGTGCGCCGGGGTAGCGGCGGCG
____________________________________________________________
consensus GATAGCGGCGGAGATTTTGGGAGCGGTGGAGAATCTAAGTGCGCCGGGGTAGCGGCGGCG
. : . : . : . : . : . :
rJMFF006D02- GCGGTGGGG
rJMSF048E17- GCGGTGGGGAAGTCTGAGAGAGAATGCGGAAGAGATGGGAGGAGTGAGAGCGGGGGTTTT
JMSF036E08+ GCGGTGGGGAAGTCTGAGAGAGAATGCGGAAGAGATGGGAGGAGTGAGAGCGGGGGTTTT
JMFF006D02+ GCGGTGGGGAAGTCTGAGAGAGAATGCGGAAGAGATGGGAGGAGTGAGAGCGGGGGTTTT
JMSF048E17+ GCGGTGGGGAAGTCTGAGAGAGAATGCGGAAGAGATGGGAGGAGTGAGAGCGGGGGTTTT
____________________________________________________________
consensus GCGGTGGGGAAGTCTGAGAGAGAATGCGGAAGAGATGGGAGGAGTGAGAGCGGGGGTTTT
. : . : . : . : . : . :
rJMSF048E17- GGAGGA
JMSF036E08+ GGAGGAAAGGAGAGCGAAGGGTTTGGTGGCGGCGGCGGCGGAAGATGAGGTAGGTTTGAG
JMFF006D02+ GGAGGAAAGGAGAGCGAAGGGTTTGGTGGCGGCGGCGGCGGAAGATGAGGTAGGTTTGAG
JMSF048E17+ GGAGGAAAGGAGAGCGAAGGGTTTGGTGGCGGCGGCGGCGGAAGATGAGGTAGGTTTGAG
____________________________________________________________
consensus GGAGGAAAGGAGAGCGAAGGGTTTGGTGGCGGCGGCGGCGGAAGATGAGGTAGGTTTGAG
. : . : . : . : . : . :
JMSF036E08+ AAGCTTCGAGAGAGTGGTGGAAACGGCGGTTGCGGCTGCCATTTTTCTGGTCTGT
JMFF006D02+ AAGCTTCGAGAGAGTGGTGGAAACGGCGGTTGCGGCTGCCATTTTTCTGGTCTGT
JMSF048E17+ AAGCTTCGAGAGAGTGGTGGAAACGGCGGTTGCGGCTGCCATTTTTCTGGTCTGTCTATC
____________________________________________________________
consensus AAGCTTCGAGAGAGTGGTGGAAACGGCGGTTGCGGCTGCCATTTTTCTGGTCTGTCTATC