Contig 006704:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002H05Sequence562006704 (6)ref|XP_009790840.1|2e-81PREDICTED: uncharacterized protein LOC104238234 isoform X2 [Nicotiana sylvestri
JMFF003E08Sequence130006704 (6)
JMSF010H19Sequence397006704 (6)ref|XP_009790840.1|1e-51PREDICTED: uncharacterized protein LOC104238234 isoform X2 [Nicotiana sylvestri742006704 (6)ref|XP_003603211.1|3e-87hypothetical protein MTR_3g105080 [Medicago truncatula] gb|AES73462.1| ferredoxi
JMSF045L07Sequence751006704 (6)ref|XP_009626175.1|1e-99PREDICTED: uncharacterized protein LOC104116915 isoform X2 [Nicotiana tomentosi722006704 (6)ref|XP_003603211.1|6e-65hypothetical protein MTR_3g105080 [Medicago truncatula] gb|AES73462.1| ferredoxi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF045L07- GCAGTATGCTCATTTACATAACCTGCAGGATTGGTGGCTTATCATTTAAAGGTGCA
                      ____________________________________________________________
consensus GCAGTATGCTCATTTACATAACCTGCAGGATTGGTGGCTTATCATTTAAAGGTGCA
 
. : . : . : . : . : . :
rJMSF045L07- TATAAGAGATCCAAAATATTTTCAACAAAATCAAATGTGGAAATGGTATTCTTTACAGAG
rJMSF010H19- AATGGTATTCTTTACAGAG
                      ____________________________________________________________
consensus TATAAGAGATCCAAAATATTTTCAACAAAATCAAATGTGGAAATGGTATTCTTTACAGAG
 
. : . : . : . : . : . :
rJMSF045L07- AACATTGATGAATGAATTGATACAATAATGATACACTAAACACAGTTCCTACGGCATAAC
rJMSF010H19- AACATTGATGAATGAATTGATACAATAATGATACACTAAACACAGTTCCTACGGCATAAC
                      ____________________________________________________________
consensus AACATTGATGAATGAATTGATACAATAATGATACACTAAACACAGTTCCTACGGCATAAC
 
. : . : . : . : . : . :
rJMSF045L07- AAGAGAGTTGCCCAAGAACAGCCATCCACAATCCATGAAATGGTGGGTTATACTGATCCA
rJMSF010H19- AAGAGAGTTGCCCAAGAACAGCCATCCACAATCCATGAAATGGTGGGTTATACTGATCCA
JMSF045L07+ AATCCATGAAATGGTGGGTTATACTGATCCA
                      ____________________________________________________________
consensus AAGAGAGTTGCCCAAGAACAGCCATCCACAATCCATGAAATGGTGGGTTATACTGATCCA
 
. : . : . : . : . : . :
rJMSF045L07- AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
rJMSF010H19- AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
JMSF045L07+ AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
                      ____________________________________________________________
consensus AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
 
. : . : . : . : . : . :
rJMSF045L07- GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
rJMSF010H19- GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
JMSF045L07+ GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
                      ____________________________________________________________
consensus GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
 
. : . : . : . : . : . :
rJMSF045L07- TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
rJMSF010H19- TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
JMFF002H05+ TCGATTTGCCATTGCTGAAGAGC
JMSF045L07+ TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
                      ____________________________________________________________
consensus TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
 
. : . : . : . : . : . :
rJMSF045L07- ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
rJMSF010H19- ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
JMFF002H05+ ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
JMSF045L07+ ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
                      ____________________________________________________________
consensus ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
 
. : . : . : . : . : . :
rJMSF045L07- TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
rJMSF010H19- TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
JMFF002H05+ TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
JMSF045L07+ TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
                      ____________________________________________________________
consensus TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
 
. : . : . : . : . : . :
rJMSF045L07- GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
rJMSF010H19- GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
JMFF002H05+ GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
JMSF010H19+ CGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
JMSF045L07+ GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
                      ____________________________________________________________
consensus GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
 
. : . : . : . : . : . :
rJMSF045L07- AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
rJMSF010H19- AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
JMFF002H05+ AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
JMSF010H19+ AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
JMSF045L07+ AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
                      ____________________________________________________________
consensus AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
 
. : . : . : . : . : . :
rJMSF045L07- GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
rJMSF010H19- GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
JMFF002H05+ GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
JMSF010H19+ GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
JMSF045L07+ GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
                      ____________________________________________________________
consensus GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
 
. : . : . : . : . : . :
rJMSF045L07- TGCAGA
rJMSF010H19- TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
JMFF002H05+ TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
JMSF010H19+ TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
JMSF045L07+ TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
                      ____________________________________________________________
consensus TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
 
. : . : . : . : . : . :
rJMSF010H19- CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
JMFF002H05+ CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
JMSF010H19+ CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
JMFF003E08+ CTTTNCTTTGA
JMSF045L07+ CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
                      ____________________________________________________________
consensus CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
 
. : . : . : . : . : . :
rJMSF010H19- GC
JMFF002H05+ GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAAGAAACCATTGAAGAAACGCC
JMSF010H19+ GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAA-AAACCATTGAAGAAACGCC
JMFF003E08+ GCATTAGCGGAGGCGGAGGTGAAGAAAATNCAGAGAAGAAGAATCCATTGAAGAAACGCC
JMSF045L07+ GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAAGAAACCATTGAAGAAACGCC
                      ____________________________________________________________
consensus GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAAGAAACCATTGAAGAAACGCC
 
. : . : . : . : . : . :
JMFF002H05+ ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGCATC
JMSF010H19+ ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGC
JMFF003E08+ ATTGTGGGGAGGTTAGAGAGAGNCGGGAAATGTGAGGAAGCTGTGGAGC
JMSF045L07+ ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGCATCGCAGAGCC
                      ____________________________________________________________
consensus ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGCATCGCAGAGCC