| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037H05 | Sequence | 612 | 006693 (6) | ref|XP_009621605.1| | 2e-69 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 706 | 012594 (4) | ref|XP_008353771.1| | 7e-101 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Malus domestica] |
| JMFF040O02 | Sequence | 497 | 006693 (6) | ref|XP_009621605.1| | 6e-52 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 706 | 012594 (4) | ref|XP_008353771.1| | 4e-106 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Malus domestica] |
| JMFF046C04 | Sequence | 591 | 006693 (6) | ref|XP_009621605.1| | 3e-82 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 571 | 012594 (4) | ref|XP_002525155.1| | 4e-62 | acyl-CoA oxidase, putative [Ricinus communis] gb|EEF37282.1| acyl-CoA oxidase, p |
| JMSF020A10 | Sequence | 692 | 006693 (6) | ref|XP_009621605.1| | 9e-133 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 785 | 012594 (4) | ref|XP_008353771.1| | 9e-107 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Malus domestica] |
| JMSF022E24 | Sequence | 692 | 006693 (6) | ref|XP_009621605.1| | 8e-112 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 690 | 019309 | ref|XP_008353771.1| | 2e-27 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Malus domestica] |
| JMSF044I20 | Sequence | 607 | 006693 (6) | ref|XP_009621605.1| | 3e-87 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 746 | 002649 (5) | gb|KJB19598.1| | 2e-122 | hypothetical protein B456_003G110800 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMSF020A10+ GATCTGAGCAATAAACGCATGGACTCCTTGATCTTTCCCGTCAATC
____________________________________________________________
consensus GATCTGAGCAATAAACGCATGGACTCCTTGATCTTTCCCGTCAATC
. : . : . : . : . : . :
JMSF020A10+ TTAAGTTGTGAAAATACTATTGTATGTGTTGCATGATTAGCTGCCCCTCCTATCCAGTAC
____________________________________________________________
consensus TTAAGTTGTGAAAATACTATTGTATGTGTTGCATGATTAGCTGCCCCTCCTATCCAGTAC
. : . : . : . : . : . :
JMSF022E24+ TAACAAACTCCCCTGTGCTCGAGTCATAAGTT
JMSF020A10+ TTCTGAGCTGATTCACATGGAGTGTTTATAACAAACTCTCCTGTTCTTGAGTCATACGTT
____________________________________________________________
consensus TTCTGAGCTGATTCACATGGAGTGTTTATAACAAACTCTCCTGTTCTTGAGTCATACGTT
. : . : . : . : . : . :
JMSF022E24+ GTGACTGTTTCAATGCCTCGAACATTGCTGCCATGCCCTAACTCCGTCATTGCAAAGCAA
JMSF020A10+ GTGACTGTTTCAATACCTCGTACATTACTGCCATGCCCCAACTCTGTCATTGCAAAGCAA
JMFF037H05+ CAAAGCAA
____________________________________________________________
consensus GTGACTGTTTCAATGCCTCGTACATTGCTGCCATGCCCTAACTCTGTCATTGCAAAGCAA
. : . : . : . : . : . :
JMSF022E24+ CCTTTAATCACATAATTTTCAGTATCACACAACCACTTATCATGGTGGCGTTTTGTCCCG
JMSF020A10+ CCTTTCACTGCATAATTTTCAGTATCCCTCAACCACTCATCATGGTGGCGCTTTGTTCCC
JMFF037H05+ CCTTTCACTGCATAATTTTCAGTATCCCTCAACCACTCATCATGGTGGCGCTTTGTTCCC
JMFF046C04+ CTGCATAATTTTCAGTATCCCTCANCCACTCATCATGGTGGCGCTTTGTTCCC
JMSF044I20+ CATAATTTTCAGTATCCCTCAACCACTCATCATGGTGGCGCTTTGTTCCC
____________________________________________________________
consensus CCTTTCACTGCATAATTTTCAGTATCCCTCAACCACTCATCATGGTGGCGCTTTGTTCCC
. : . : . : . : . : . :
JMSF022E24+ AAAAATTGGATAGCTCCACCCCACAACATGAAATGGACACCAATCTTGACACTCAGAGAT
JMSF020A10+ AGAAACTGGATAGCTCCACCCCAGAGAATGAAATGGACACCAAGTTTGACACTGAGAGAG
JMFF040O02+ CTGAGAGAG
JMFF037H05+ AGAAACTGGATAGCTCCACCCCAGAGAATGAAATGGACACCAAGTTTGACACTGAGAGAG
JMFF046C04+ AGAAACTGGATAGCTCCACCCCAGAGAATGAAATGGACACCAAGTTTGACACTGAGAGAG
JMSF044I20+ AGAAACTGGATAGCTCCACCCCAGAGAATGAAATGGACACCAAGTTTGACANTGAGAGAG
____________________________________________________________
consensus AGAAACTGGATAGCTCCACCCCAGAGAATGAAATGGACACCAAGTTTGACACTGAGAGAG
. : . : . : . : . : . :
JMSF022E24+ TGATCAAAAATAGCAACAACTTCCAAGAG-AGCCAGCTTCCTGAGCTCAGCTTCAGGCCC
JMSF020A10+ TGATCAAAAAGGGCAATAACATCCAGGAG-AGCCAGCTTCCTAAGCTCAGATTCAGGGCC
JMFF040O02+ TGATCAAAAAGGGCAATAACATCCAGGAGGAGCCAGCTTCCTAAGCTCAGATTCAGGGCC
JMFF037H05+ TGATCAAAAAGGGCAATAACATCCAGGAGAAGCCAGCTTCCTAAGCTCAGATTCAGGGCC
JMFF046C04+ TGATCAAAAAGGGCAATAACATCCAGGAG-AGCCAGCTTCCTAAGCTCAGATTCAGGGCC
JMSF044I20+ TGATCAAAAAGGGCAATAACATCCAGGAG-AGCCAGCTTCCTAAGCTCAGATTCAGGGCC
____________________________________________________________
consensus TGATCAAAAAGGGCAATAACATCCAGGAG-AGCCAGCTTCCTAAGCTCAGATTCAGGGCC
. : . : . : . : . : . :
JMSF022E24+ TTTCCCAGTTAGCCATCCCTGAAAAACCCCACAATCCAAGAGATACCCAATTCTCTTCAT
JMSF020A10+ ATTTTCAGTGAGCCATCCCTTAAAAACCCCACAATCTAAGAGATGCCCAATTCTCCTCAT
JMFF040O02+ ATTTTCAGTGAGCCATCCCTTAAAAACCCCACAATCTAAGAGATGCCCAATTCTCCTCAT
JMFF037H05+ ATTTTCAGTGAGCCATCCCTTAAAAACCCCACAATCTAAGAGATGCCCAATTCTCCTCAT
JMFF046C04+ ATTTTCAGTGAGCCATCCCTTAAAAACCCCACAATCTAAGAGATGCCCAATTCTCCTCAT
JMSF044I20+ ATTTTCAGTGAGCCATCCCTTAAAAACCCCACAATCTAAGAGATGCCCAATTCTCCTCAT
____________________________________________________________
consensus ATTTTCAGTGAGCCATCCCTTAAAAACCCCACAATCTAAGAGATGCCCAATTCTCCTCAT
. : . : . : . : . : . :
JMSF022E24+ GGTCATCTCTCTCTGCTGCTCCATGGATTGGTTATAATCCGCCCCCACAAACACTTTCCC
JMSF020A10+ CGTCATCCCTCTCTGCTGCTCCATATTCTGGTTATAATCCGCCGCCACAAACACCTTTCC
JMFF040O02+ CGTCATCTCTCTCTGCTGCTCCATATTCTGGTTATAATCCGCCGCCACAAACACCTTTCC
JMFF037H05+ CGTCATCTCTCTCTGCTGCTCCATATTCTGGTTATAATCCGCCGCCACAAACACCTTTCC
JMFF046C04+ CGTCATCTCTCTCTGCTGCTCCATATTCTGGTTATAATCCGCCGCCACAAACACCTTTCC
JMSF044I20+ CGTCATCTCTCTCTGCTGCTCCATATTCTGGTTATAATCCGCCGCCACAAACACCTTTCC
____________________________________________________________
consensus CGTCATCTCTCTCTGCTGCTCCATATTCTGGTTATAATCCGCCGCCACAAACACCTTTCC
. : . : . : . : . : . :
JMSF022E24+ GCCCCTACCCCTCGGGTTGAAAAGCCTGCTCTGGGTGATGATACCATAAACCCAATCCCT
JMSF020A10+ GCCTCTCTCCCTCGGGTTGAAAAGATGGCTCTGGATCATGATGCCATAGAGCCAATCCCT
JMFF040O02+ GCCTCTCTCCCTCGGGTTGAAAAGATGGCTCTGGATCATGATGCCATAGAGCCAATCCCT
JMFF037H05+ GCCTCTCTCCCTCGGGTTGAAAAGATGGCTCTGGATCATGATGCCATAGAGCCAATCCCT
JMFF046C04+ GCCTCTCTCCCTCGGGTTGAAAAGATGGCTCTGGATCATGATGCCATAGAGCCAATCCCT
JMSF044I20+ GCCTCTCTCCCTCGGGTTGAAAAGATGGCTCTGGATCATGATGCCATAGAGCCAATCCCT
____________________________________________________________
consensus GCCTCTCTCCCTCGGGTTGAAAAGATGGCTCTGGATCATGATGCCATAGAGCCAATCCCT
. : . : . : . : . : . :
JMSF022E24+ TTCCTGCAAGTTGTGGCCGTCCATCAGCTTCCGCATC
JMSF020A10+ GTCCTGCAAGTTGTGCCCGTCCATCAGCTTCCGCATCTCCCAAACGTCCAAGCCGCCTGG
JMFF040O02+ GTCCTGCAAGTTGTGCCCGTCCATCAGCTTCCGCATC
JMFF037H05+ GTCCTGCAAGTTGTGCCCGTCCATCAGCTTCCGCATCTCCCAAACGTCCAAGCCGCCTGG
JMFF046C04+ GTCCTGCAAGTTGTGCCCGTCCATCAGCTTCCGCATCTCCCAAACGTCCAAGCCGCCTGG
JMSF044I20+ GTCCTGCAAGTTGTGCCCGTCCATCAGCTTCCGCATCTCCCAAACGTCCAAGCCGCCTGG
____________________________________________________________
consensus GTCCTGCAAGTTGTGCCCGTCCATCAGCTTCCGCATCTCCCAAACGTCCAAGCCGCCTGG
. : . : . : . : . : . :
JMSF020A10+ CTCGGAGACCTCCGGCGGGGTGTAGCTCAGGCACGGCGACGCCGAC
JMFF037H05+ CTCGGAGACCTCCGGCGGGGTGTAGCTCAGGCACGGCGACGCCGACAGCGAGCATTGGAG
JMFF046C04+ CTCGGAGACCTCCGGCGGGGTGTAGCTCAGGCACGGCGACGCCGACAGCGAGCATTGGAG
JMSF044I20+ CTCGGAGACCTCCGGCGGGGTGTAGCTCAGGCACGGCGACGCCGACAGCGAGCATTGGAG
____________________________________________________________
consensus CTCGGAGACCTCCGGCGGGGTGTAGCTCAGGCACGGCGACGCCGACAGCGAGCATTGGAG
. : . : . : . : . : . :
JMFF037H05+ GATCGGAGGGTGGTTGTTTTGTTGGGTTAGGTGTCCGCTTAGGACTTTGGCTCGGAAATT
JMFF046C04+ GATCGGAGGGTGGTTGTTTTGTTGGGTTAGGTGTCCGCTTAGGACTTTGGCTCGGAAATT
JMSF044I20+ GATCGGAGGGTGGTTGTTTTGTTGGGTTAGGTGTCCGCTTAGGACTTTGGCTCGGAAATT
____________________________________________________________
consensus GATCGGAGGGTGGTTGTTTTGTTGGGTTAGGTGTCCGCTTAGGACTTTGGCTCGGAAATT
. : . : . : . : . : . :
JMFF037H05+ CGGTTTCTCCGTTGACGACGGTGAAGACTCCATTATTGCGAATAAAGCAGCCAGCTTT
JMFF046C04+ CGGTTTCTCCGTTGACGACGGTGAAGACTCCATTATTGCGAATAAAGCAGCCAGCTTT
JMSF044I20+ CGGTTTCTCCGTTGANGACGGTGAAGACTCCATTATTGCGAATAAAGCAGCCAGCTTTCC
____________________________________________________________
consensus CGGTTTCTCCGTTGACGACGGTGAAGACTCCATTATTGCGAATAAAGCAGCCAGCTTTCC