Contig 006678:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027F01Sequence570006678 (3)gb|KJB65844.1|5e-58hypothetical protein B456_010G115900 [Gossypium raimondii]
JMFS108A07Sequence625006678 (3)gb|KJB65843.1|4e-41hypothetical protein B456_010G115900 [Gossypium raimondii]
JMSF043G03Sequence770006678 (3)ref|XP_009784078.1|1e-82PREDICTED: uncharacterized protein LOC104232550 isoform X1 [Nicotiana sylvestri749024662ref|XP_009784079.1|1e-38PREDICTED: rab11 family-interacting protein 4B-like isoform X2 [Nicotiana sylve

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043G03+ GAGTTCAAGAAAGGATGCTGTTGCAACACTCCTTGATAAATCAATATCAG
                      ____________________________________________________________
consensus GAGTTCAAGAAAGGATGCTGTTGCAACACTCCTTGATAAATCAATATCAG
 
. : . : . : . : . : . :
JMSF043G03+ ATAGTAATTTTGCCATCCATTCCTCCAAAGAAGAACGTCTCTCTTCCAGTAAGACCTTGG
                      ____________________________________________________________
consensus ATAGTAATTTTGCCATCCATTCCTCCAAAGAAGAACGTCTCTCTTCCAGTAAGACCTTGG
 
. : . : . : . : . : . :
JMSF043G03+ TTTTCAACCGTGAGAATCCCTTTGGTGGGGCTGGTGGGAGATTTTTCTTGGGGAATATTT
                      ____________________________________________________________
consensus TTTTCAACCGTGAGAATCCCTTTGGTGGGGCTGGTGGGAGATTTTTCTTGGGGAATATTT
 
. : . : . : . : . : . :
JMSF043G03+ TTTTTAGCGCAGCATGAAATTTCAAGAAATCATTAAATCTTCTAAGTACAATTCGTGTAC
                      ____________________________________________________________
consensus TTTTTAGCGCAGCATGAAATTTCAAGAAATCATTAAATCTTCTAAGTACAATTCGTGTAC
 
. : . : . : . : . : . :
JMFS027F01+ CACTACAGGATCTG
JMFS108A07+ CACTACAGGATCTG
JMSF043G03+ TTGTGATCCCATCTGGCGACTGTATGCCAACCACAACCCTGTAGAACACTACAGGATCTG
                      ____________________________________________________________
consensus TTGTGATCCCATCTGGCGACTGTATGCCAACCACAACCCTGTAGAACACTACAGGATCTG
 
. : . : . : . : . : . :
JMFS027F01+ AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
JMFS108A07+ AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
JMSF043G03+ AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
                      ____________________________________________________________
consensus AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
 
. : . : . : . : . : . :
JMFS027F01+ TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
JMFS108A07+ TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
JMSF043G03+ TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
                      ____________________________________________________________
consensus TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
 
. : . : . : . : . : . :
JMFS027F01+ AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
JMFS108A07+ AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
JMSF043G03+ AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
                      ____________________________________________________________
consensus AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
 
. : . : . : . : . : . :
JMFS027F01+ TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
JMFS108A07+ TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
JMSF043G03+ TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
                      ____________________________________________________________
consensus TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
 
. : . : . : . : . : . :
JMFS027F01+ CGTGCACATATAAAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
JMFS108A07+ CGTGCACATATACAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
JMSF043G03+ CGTGCACATATACAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
                      ____________________________________________________________
consensus CGTGCACATATACAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
 
. : . : . : . : . : . :
JMFS027F01+ AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
JMFS108A07+ AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
JMSF043G03+ AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
                      ____________________________________________________________
consensus AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
 
. : . : . : . : . : . :
JMFS027F01+ AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGATTTAGAGAAT
JMFS108A07+ AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGA
JMSF043G03+ AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGATTTAGAGAAT
                      ____________________________________________________________
consensus AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGATTTAGAGAAT
 
. : . : . : . : . : . :
JMFS027F01+ TGTGGGAAAAATATGAGCAGAGAGGAAATGGCGTATTATAACGATAGAGAGTGA
JMSF043G03+ TGTGGGAAAAATATGAGCAGAGAGGAAATGGCGTATTATAACGATAGAGAGTGAGACTTC
                      ____________________________________________________________
consensus TGTGGGAAAAATATGAGCAGAGAGGAAATGGCGTATTATAACGATAGAGAGTGAGACTTC