Contig 006666:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF041P21Sequence702006666 (2)gb|ABY19383.1|2e-105putative chlorophyllase [Nicotiana tabacum]835006666 (2)ref|XP_007222997.1|4e-118hypothetical protein PRUPE_ppa010004mg [Prunus persica] gb|EMJ24196.1| hypotheti

Alignment

This contig is upended


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rJMSF041P21-                   ATAGCAGTTACTTTACTGGTTTTCTTGGAACATTAATTCAGCTATTCATTG
                      ____________________________________________________________
consensus                      ATAGCAGTTACTTTACTGGTTTTCTTGGAACATTAATTCAGCTATTCATTG
 
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rJMSF041P21-          TGGTAATACATACACATTACTCACCATTGATTTGCAACAAATTTTCCCTTTCTCCTCCAT
                      ____________________________________________________________
consensus             TGGTAATACATACACATTACTCACCATTGATTTGCAACAAATTTTCCCTTTCTCCTCCAT
 
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rJMSF041P21-          ATGTATAAGTATTATAAGCAACCAACCATATATGTTTAGTGGTTTAATTTTCTTGGAAAG
                      ____________________________________________________________
consensus             ATGTATAAGTATTATAAGCAACCAACCATATATGTTTAGTGGTTTAATTTTCTTGGAAAG
 
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rJMSF041P21-          CTACTGTCTGGAGCTCAACTGGTGCAATTTCTTCATGCCTGTCTCTAATGGCTGCCAGTG
                      ____________________________________________________________
consensus             CTACTGTCTGGAGCTCAACTGGTGCAATTTCTTCATGCCTGTCTCTAATGGCTGCCAGTG
 
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rJMSF041P21-          AGCTGAAATCTCCTTCCAAATAACCTCTCAAGAAAGCCACCACAGCGCCCCCAACAAACG
                      ____________________________________________________________
consensus             AGCTGAAATCTCCTTCCAAATAACCTCTCAAGAAAGCCACCACAGCGCCCCCAACAAACG
 
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rJMSF041P21-          CCCTCATCGCCGCCCTCTCCTTCCCATTCTTGCACAAACAATAAGTAGCCTTCCCGCGAA
                      ____________________________________________________________
consensus             CCCTCATCGCCGCCCTCTCCTTCCCATTCTTGCACAAACAATAAGTAGCCTTCCCGCGAA
 
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rJMSF041P21-          CCCCTCCAGTCTCATCATCAAGCATGTCAAAATGCCCATAGTCTTTAGCCACAAAGTAAC
                      ____________________________________________________________
consensus             CCCCTCCAGTCTCATCATCAAGCATGTCAAAATGCCCATAGTCTTTAGCCACAAAGTAAC
 
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rJMSF041P21-          AAGCCGGTCCACGACACTCCTGGTAGAAATCCCGGTGGTTCACCCCCTTGGGGGCGCAAG
JMSF041P21+                             CCTGGTAGAAATCCCGGTGGTTCACCCCCTTGGGGGCGCAAG
                      ____________________________________________________________
consensus             AAGCCGGTCCACGACACTCCTGGTAGAAATCCCGGTGGTTCACCCCCTTGGGGGCGCAAG
 
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rJMSF041P21-          GAGGGAATAGAGGGTTCCTCTTCACCTCCCCGAGGCCTGACCCGATCACCATCACAGCCA
JMSF041P21+           GAGGGAATAGAGGGTTCCTCTTCACCTCCCCGAGGCCTGACCCGATCACCATCACAGCCA
                      ____________________________________________________________
consensus             GAGGGAATAGAGGGTTCCTCTTCACCTCCCCGAGGCCTGACCCGATCACCATCACAGCCA
 
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rJMSF041P21-          TGCCAAGATCAAAGGACTGGGGAATGTAGGTTAGGACAGGAGGGGGAGTCCGTTTCCCTT
JMSF041P21+           TGCCAAGATCAAAGGACTGGGGAATGTAGGTTAGGACAGGAGGGGGAGTCCGTTTCCCTT
                      ____________________________________________________________
consensus             TGCCAAGATCAAAGGACTGGGGAATGTAGGTTAGGACAGGAGGGGGAGTCCGTTTCCCTT
 
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rJMSF041P21-          TGTCCATTCCATCAACAGGGTCCACGCCTATCAAGGCCGAGAGTTTGAGATCAGTCCTGG
JMSF041P21+           TGTCCATTCCATCAACAGGGTCCACGCCTATCAAGGCCGAGAGTTTGAGATCAGTCCTGG
                      ____________________________________________________________
consensus             TGTCCATTCCATCAACAGGGTCCACGCCTATCAAGGCCGAGAGTTTGAGATCAGTCCTGG
 
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rJMSF041P21-          CTATCTTGCCTAGAGCTAGCCCGAATGCAACTTTCCCCCCGCGGCTATGGCCTCCCAAAG
JMSF041P21+           CTATCTTGCCTAGAGCTAGCCCGAATGCAACTTTCCCCCCGCGGCTATGGCCTCCCAAAG
                      ____________________________________________________________
consensus             CTATCTTGCCTAGAGCTAGCCCGAATGCAACTTTCCCCCCGCGGCTATGGCCTCCCAAAG
 
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rJMSF041P21-          CTATCTTTTGTGTGTTTGGGTGGACATGGGGAGGAAGGAAATTGTGTAGTCCTTCAGGGA
JMSF041P21+           CTATCTTTTGTGTGTTTGGGTGGACATGGGGAGGAAGGAAATTGTGTAGTCCTTCAGGGA
                      ____________________________________________________________
consensus             CTATCTTTTGTGTGTTTGGGTGGACATGGGGAGGAAGGAAATTGTGTAGTCCTTCAGGGA
 
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rJMSF041P21-          GCCAGTTTGTGATTTGGGCTGTGCATTTTATCTCTTCAGTTGCATCTGCCCCTGCTACAC
JMSF041P21+           GCCAGTTTGTGATTTGGGCTGTGCATTTTATCTCTTCAGTTGCATCTGCCCCTGCTACAC
                      ____________________________________________________________
consensus             GCCAGTTTGTGATTTGGGCTGTGCATTTTATCTCTTCAGTTGCATCTGCCCCTGCTACAC
 
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rJMSF041P21-          TATA                                                        
JMSF041P21+           TATATAGCTGGGGAGCAACAACAATGAAGCCATGAGAAGCGATGTGTTGAATGAGCTGAG
                      ____________________________________________________________
consensus             TATATAGCTGGGGAGCAACAACAATGAAGCCATGAGAAGCGATGTGTTGAATGAGCTGAG
 
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JMSF041P21+           AGTAGAAAGAGTTGTAGAAAAGATAGCCATGAAGAAACAAGAAGATTGGGAAAGCCCCTG
                      ____________________________________________________________
consensus             AGTAGAAAGAGTTGTAGAAAAGATAGCCATGAAGAAACAAGAAGATTGGGAAAGCCCCTG
 
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JMSF041P21+           CAGAAGCTTCTGAAGGGGTGGCAATCAAGAGTGGCTTTGGAGGGGGGTGTGAAGTGCATT
                      ____________________________________________________________
consensus             CAGAAGCTTCTGAAGGGGTGGCAATCAAGAGTGGCTTTGGAGGGGGGTGTGAAGTGCATT
 
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JMSF041P21+           TATGGGGTTCAACACTCACCAACTCAACTGTGTATTTGCCAACATCAAAGATGTTAGTAG
                      ____________________________________________________________
consensus             TATGGGGTTCAACACTCACCAACTCAACTGTGTATTTGCCAACATCAAAGATGTTAGTAG
 
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JMSF041P21+           CAGTAGAAGAAGATGATGAGAAAGTCACTGCCATGGCTAGCTGATGAGAGTCCAAGTCTC
                      ____________________________________________________________
consensus             CAGTAGAAGAAGATGATGAGAAAGTCACTGCCATGGCTAGCTGATGAGAGTCCAAGTCTC