Contig 006661:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M11Sequence505006661 (3)ref|XP_010032541.1|3e-54PREDICTED: serine carboxypeptidase-like 25 [Eucalyptus grandis] gb|KCW51926.1| h632008218 (3)ref|XP_009771074.1|2e-104PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]
JMSF041D15Sequence778006661 (3)ref|XP_009771074.1|5e-116PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]666008218 (3)ref|XP_009771074.1|2e-127PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]
JMSF041G15Sequence800006661 (3)ref|XP_009771074.1|2e-120PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]638008218 (3)ref|XP_009596929.1|6e-120PREDICTED: serine carboxypeptidase-like 25 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF041D15+                                                                      T
JMSF041G15+                                                   TACGTCACCGTTCCCAGGTT
                      ____________________________________________________________
consensus                                                     TACGTCACCGTTCCCAGGTT
 
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JMSF041D15+           GTCGTGGTAGTTGTCGGTAANTGCGTTCCCCACCATGAACCCTTTAATCTTGATCGGATT
JMSF041G15+           GTCGTGGTAGTTGTCGGTAACTGCGTTCCCCACCATGAACCCTTTAATCTTGATCGGATT
                      ____________________________________________________________
consensus             GTCGTGGTAGTTGTCGGTAACTGCGTTCCCCACCATGAACCCTTTAATCTTGATCGGATT
 
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JMSF041D15+           CTTGGAATGCGCGTTATAGTGCACAATCTCTCTGGCGAGCTGAGGAACATAATGCCCGGC
JMSF041G15+           CTTGGAATGCGCGTTATAGTGCACAATCTCTCTGGCGAGCTGAGGAACATAATGCCCGGC
                      ____________________________________________________________
consensus             CTTGGAATGCGCGTTATAGTGCACAATCTCTCTGGCGAGCTGAGGAACATAATGCCCGGC
 
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JMSF041D15+           GTAGCTCTCGCCGGTCAGATACACATCCCGGCCTTTGTACGACGGGAATCGGTCCATCCA
JMSF041G15+           GTAGCTCTCGCCGGTCAGATACACATCCCGGCCTTTGTACGACGGGAATCGGTCCATCCA
                      ____________________________________________________________
consensus             GTAGCTCTCGCCGGTCAGATACACATCCCGGCCTTTGTACGACGGGAATCGGTCCATCCA
 
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JMSF041D15+           TCTTATTAGAAACTGCAACGAGTCCTTTGCAGTGCGATGATCTCCGGTGTCGAGGAGATC
JMSF041G15+           TCTTATTAGAAACTGCAACGAGTCCTTTGCAGTGCGATGATCTCCGGTGTCGAGGAGATC
                      ____________________________________________________________
consensus             TCTTATTAGAAACTGCAACGAGTCCTTTGCAGTGCGATGATCTCCGGTGTCGAGGAGATC
 
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JMSF041D15+           AGAAGATCGGTTAGTATAAGAGAAACCGACACCGGCCGGGGTTTCGAGGAAGAGCAAGTT
JMFF020M11+                                            GGCCGGGGCTTCGAGGAAGAGCAAGTT
JMSF041G15+           AGAAGATCGGTTAGTATAAGAGAAACCGACACCGGCCGGGGTTTCGAGGAAGAGCAAGTT
                      ____________________________________________________________
consensus             AGAAGATCGGTTAGTATAAGAGAAACCGACACCGGCCGGGGTTTCGAGGAAGAGCAAGTT
 
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JMSF041D15+           GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
JMFF020M11+           GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
JMSF041G15+           GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
                      ____________________________________________________________
consensus             GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
 
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JMSF041D15+           AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
JMFF020M11+           AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
JMSF041G15+           AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
                      ____________________________________________________________
consensus             AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
 
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JMSF041D15+           GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
JMFF020M11+           GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
JMSF041G15+           GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
                      ____________________________________________________________
consensus             GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
 
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JMSF041D15+           CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
JMFF020M11+           CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
JMSF041G15+           CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
                      ____________________________________________________________
consensus             CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
 
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JMSF041D15+           CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
JMFF020M11+           CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
JMSF041G15+           CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
                      ____________________________________________________________
consensus             CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
 
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JMSF041D15+           GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
JMFF020M11+           GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
JMSF041G15+           GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
                      ____________________________________________________________
consensus             GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
 
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JMSF041D15+           AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
JMFF020M11+           AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
JMSF041G15+           AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
                      ____________________________________________________________
consensus             AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
 
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JMSF041D15+           AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTT    
JMFF020M11+           AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTT    
JMSF041G15+           AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTTACCC
                      ____________________________________________________________
consensus             AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTTACCC