Contig 006657:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF026E10+                               TCGTCAAGAGTTGATCGAGGTCTCTTGGCACCAGATAAGG
                      ____________________________________________________________
consensus                                 TCGTCAAGAGTTGATCGAGGTCTCTTGGCACCAGATAAGG
 
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JMSF026E10+           CACTTGGACCAATCTCTGATCTCCTGACAAGATGAGGATCTTCTCTGTGGCTAGCAATAT
JMSF040M11+                              TCTCCTGACAAGATGAGGATCTTCTCTGTGGCTAGCAATAT
                      ____________________________________________________________
consensus             CACTTGGACCAATCTCTGATCTCCTGACAAGATGAGGATCTTCTCTGTGGCTAGCAATAT
 
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JMSF026E10+           TGCTGTCGTCTTTAACAGTTACAAAACCATTGTCAGTGCACATCTTAGAGTTGACAGAAT
JMSF040M11+           TGCTGTCGTCTTTAACAGTTACAAAACCATTGTCAGTGCACATCTTAGAGTTGACAGAAT
                      ____________________________________________________________
consensus             TGCTGTCGTCTTTAACAGTTACAAAACCATTGTCAGTGCACATCTTAGAGTTGACAGAAT
 
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JMSF026E10+           TCATCTTCTCTGTAACCTCAAGTGTTTGATTGATTTCAATGCTAACTTGAAATGCAGAGT
JMSF040M11+           TCATCTTCTCTGTAACCTCAAGTGTTTGATTGATTTCAATGCTAACTTGAAATGCAGAGT
                      ____________________________________________________________
consensus             TCATCTTCTCTGTAACCTCAAGTGTTTGATTGATTTCAATGCTAACTTGAAATGCAGAGT
 
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JMSF026E10+           GATTTTTTCCAAAATCTATGTCATTATCCATTCCATGCAGTAATTGGGTTCCTTCACTTC
JMSF040M11+           GATTTTTTCCAAAATCTATGTCATTATCCATTCCATGCAGTAATTGGGTTCCTTCACTTC
                      ____________________________________________________________
consensus             GATTTTTTCCAAAATCTATGTCATTATCCATTCCATGCAGTAATTGGGTTCCTTCACTTC
 
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JMSF026E10+           CAACATTGCCATTGTTTTGTGGAGTCTCATTGTTTGCTCTCTCTTCAATAGCCTCAGATT
JMSF040M11+           CAACATTGCCATTGTTTTGTGGAGTCTCATTGTTTGCTCTCTCTTCAATAGCCTCAGATT
                      ____________________________________________________________
consensus             CAACATTGCCATTGTTTTGTGGAGTCTCATTGTTTGCTCTCTCTTCAATAGCCTCAGATT
 
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JMSF026E10+           CTCCAGGCAGAGAAAGAATTTTACTTTGTCCGCAAACAGGGTCAATATCTTCAGTTTCAG
JMSF040M11+           CTCCAGGCAGAGAAAGAATTTTACTTTGTCCGCAAACAGGGTCAATATCTTCAGTTTCAG
                      ____________________________________________________________
consensus             CTCCAGGCAGAGAAAGAATTTTACTTTGTCCGCAAACAGGGTCAATATCTTCAGTTTCAG
 
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JMSF026E10+           ATTCAGCACCACTACAAGCAGGCAGACTGATGAAATTCTCAGCCTCCATTGAGTACTTTT
JMSF040M11+           ATTCAGCACCACTACAAGCAGGCAGACTGATGAAATTCTCAGCCTCCATTGAGTACTTTT
                      ____________________________________________________________
consensus             ATTCAGCACCACTACAAGCAGGCAGACTGATGAAATTCTCAGCCTCCATTGAGTACTTTT
 
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JMSF026E10+           CAGAGGGCACAAATTAGGCAAGGAAATGATCTGCAATAATAGTGTATTTTAGAAAGGAGG
JMSF040M11+           CAGAGGGCACAAATTAGGCAAGGAAATGATCTGGAAGAATAGTGGATTTTAGAAAGGAGG
                      ____________________________________________________________
consensus             CAGAGGGCACAAATTAGGCAAGGAAATGATCTGGAATAATAGTGTATTTTAGAAAGGAGG
 
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JMSF026E10+           CGGGAGAAGCCGGCAGAATAGTTGAAGAGGAGCTAGATTCGCCGTGAAAAGATGCGAGAG
JMSF001A05+               AGA----------ATAGTTGAAGAGGAGCTAGATTCGCCGTGAAAAGATGCGAGAG
JMSF040M11+           CGGGAGA----------ATAGTTGAAGAGGAGCTAGATTCGCCGTGAAAAGATGCGAGAG
                      ____________________________________________________________
consensus             CGGGAGA----------ATAGTTGAAGAGGAGCTAGATTCGCCGTGAAAAGATGCGAGAG
 
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JMSF026E10+           ATGGCGACAGAGAAGAGAGATCTTCTCCGGAGATCCCAAAAAAAGACCAAATTTGGGGCG
JMSF001A05+           ATGGCGACAGAGAAGAGAGATCTTCTCCGGAGATCCCAAAAAAAGACCAAATTTGGGGCG
JMSF040M11+           ATGGCGACAGAGAAGAGAGATCTTCTCCGGAGATCCC-AAAAAAGACCAAATTTGGGGCG
                      ____________________________________________________________
consensus             ATGGCGACAGAGAAGAGAGATCTTCTCCGGAGATCCCAAAAAAAGACCAAATTTGGGGCG
 
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JMSF026E10+           CTGCAGTGCGGCGCTTCGCT                                        
JMSF001A05+           CTGCAGTGCGGCGCTTCGCT                                        
JMSF040M11+           CTGCAGTGCGGCGCTTCGCTACTCGGTACCGCTGGCTGCTGCGACTTTGCGTCCACGTCA
                      ____________________________________________________________
consensus             CTGCAGTGCGGCGCTTCGCTACTCGGTACCGCTGGCTGCTGCGACTTTGCGTCCACGTCA