Contig 006654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015B01Sequence510006654 (2)ref|XP_009791699.1|6e-25PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nicotiana sylvestris]630004349 (2)gb|AIU50073.1|3e-4415-cis-zeta-carotene isomerase, partial [Prunus persica]
JMSF040D15Sequence668006654 (2)ref|XP_009791699.1|1e-35PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nicotiana sylvestris]405004349 (2)gb|AIU50073.1|5e-0815-cis-zeta-carotene isomerase, partial [Prunus persica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040D15+ AAACTAGC
                      ____________________________________________________________
consensus AAACTAGC
 
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JMSF015B01+ CTCATGACT
JMSF040D15+ AAGACCACTGTGTACTATTGCAAAAATAAGAGTAAGGGCGAACATTACAATCTCATGACT
                      ____________________________________________________________
consensus AAGACCACTGTGTACTATTGCAAAAATAAGAGTAAGGGCGAACATTACAATCTCATGACT
 
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JMSF015B01+ GTCAGAGAGGCCGGAAACGGTGTCTATGAAGCTTTTGCCAAAGCCGGTGGAGTTATCGAT
JMSF040D15+ GTCAGAGAGGCCGGAAACGGTGTCTATGAAGCTTTTGCCAAAGCCGGTGGAGTTATCGAT
                      ____________________________________________________________
consensus GTCAGAGAGGCCGGAAACGGTGTCTATGAAGCTTTTGCCAAAGCCGGTGGAGTTATCGAT
 
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JMSF015B01+ CCATAGCAAGTTGAGAGCATAGAGAACAACGGCAAGAATCACAGTGAAGTAAAGCCAAGA
JMSF040D15+ CCATAGCAAGTTGAGAGCATAGAGAACAACGGCAAGAATCACAGTGAAGTAAAGCCAAGA
                      ____________________________________________________________
consensus CCATAGCAAGTTGAGAGCATAGAGAACAACGGCAAGAATCACAGTGAAGTAAAGCCAAGA
 
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JMSF015B01+ TGAAATCTTCTGTTTTGACAAGTCGAATTCCGCGGAATCCTCTCCCACCACCGCTTCTGC
JMSF040D15+ TGAAATCTTCTGTTTTGACAAGTCGAACTCCGCGGAATCCTCTCCCACCACCGCTTCTGC
                      ____________________________________________________________
consensus TGAAATCTTCTGTTTTGACAAGTCGAATTCCGCGGAATCCTCTCCCACCACCGCTTCTGC
 
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JMSF015B01+ CTCCTCCCGCGTTTTACCCACCACACCCACTAACAACAGCGGGAGTTTCCTCCGATTATT
JMSF040D15+ CTCCTCCCGCGTTTTACCCACCACACCCACTAACAACAGCGGGAGTTTCCTCCGATTATT
                      ____________________________________________________________
consensus CTCCTCCCGCGTTTTACCCACCACACCCACTAACAACAGCGGGAGTTTCCTCCGATTATT
 
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JMSF015B01+ GGGAGGGATTTCTACCCGGAAAGGCTTGGCGAGTCCATTAGTCCTCCAAGAAGAAGAAAA
JMSF040D15+ GGGAGGGATTTCTACCCGGAAAGGCTTGGCGAGTCCATTAGTCCTCCAAGAAGAAGAAAA
                      ____________________________________________________________
consensus GGGAGGGATTTCTACCCGGAAAGGCTTGGCGAGTCCATTAGTCCTCCAAGAAGAAGAAAA
 
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JMSF015B01+ AGGAGAAGGAGAAGGAGAAGGGGATGATAGTCGTCTTGTAGTTGTTGTTGGCTTGGGTAG
JMSF040D15+ AGGAGAAGGAGAAGGAGAAGGGGATGATAGTCGTCTTGTAGTTGTTGTTGGCTTGGGTAG
                      ____________________________________________________________
consensus AGGAGAAGGAGAAGGAGAAGGGGATGATAGTCGTCTTGTAGTTGTTGTTGGCTTGGGTAG
 
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JMSF015B01+ ATGAAGGAATGGGTTTGAGAGGAAAATGGAGGAAGTTGCCATAGGTGGGTGATTCAAGAT
JMSF040D15+ ATGAAGGAATGGGTTTGAGAGGAAAATGGAGGAAGTTGCCATAGGTGGGTGATTCAAGAT
                      ____________________________________________________________
consensus ATGAAGGAATGGGTTTGAGAGGAAAATGGAGGAAGTTGCCATAGGTGGGTGATTCAAGAT
 
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JMSF015B01+ TGAAGATGTTCAGGAGAAAAAAATTGGTAAGAAATACAGTAATACAGGCAAAACAGGAGA
JMSF040D15+ TGAAGATGTTCAGGAGAAAAAAATTGGTAAGAAATACAGTAATACAGGCAAAACAGGAGA
                      ____________________________________________________________
consensus TGAAGATGTTCAGGAGAAAAAAATTGGTAAGAAATACAGTAATACAGGCAAAACAGGAGA
 
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JMSF015B01+ GGGAATCTAGAGAGGAAGGT
JMSF040D15+ GGGAATCTAGAGAGGAAGGTGCTGTTTGGAGTGGGTTTTGGACGGCTTTGGCGGAGGGAA
                      ____________________________________________________________
consensus GGGAATCTAGAGAGGAAGGTGCTGTTTGGAGTGGGTTTTGGACGGCTTTGGCGGAGGGAA
 
. : . : . : . : . : . :
JMSF040D15+ TTGAAGTGCTAATCCCACTCGCTCCCACCACTCTTCGTTACATGGAGTTGGCGGTGGATC
                      ____________________________________________________________
consensus TTGAAGTGCTAATCCCACTCGCTCCCACCACTCTTCGTTACATGGAGTTGGCGGTGGATC