Contig 006630:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011F22Sequence614006630 (5)ref|XP_009772814.1|5e-67PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]764006809 (5)ref|XP_002509559.1|4e-48conserved hypothetical protein [Ricinus communis] gb|EEF50946.1| conserved hypot
JMFN002E01Sequence201006630 (5)
JMSF008F24Sequence390006630 (5)ref|XP_009772814.1|5e-35PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]783006809 (5)ref|XP_002509559.1|1e-73conserved hypothetical protein [Ricinus communis] gb|EEF50946.1| conserved hypot
JMSF019G06Sequence581006630 (5)ref|XP_009772814.1|2e-80PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]765006809 (5)ref|XP_002509559.1|6e-68conserved hypothetical protein [Ricinus communis] gb|EEF50946.1| conserved hypot
JMSF038A24Sequence647006630 (5)ref|XP_009772814.1|1e-67PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]822006809 (5)ref|XP_004303999.1|2e-82PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF019G06+ TTAATGTATGGATACCAAAAGGATTT
                      ____________________________________________________________
consensus TTAATGTATGGATACCAAAAGGATTT
 
. : . : . : . : . : . :
JMSF019G06+ CTTTCCTTGCTTCTTTTCATACATGAGATAGAGTGCCAAGCAGGCTAGTTCTGATAATTT
JMFF011F22+ TTTTCATACATGAGATAGAGTGCCAAGCAGGCTAGTACTGATAATTT
JMSF038A24+ TTTTCATACATGAGATAGAGTGCCAAGCAGGCTAGTTCTGATAATTT
                      ____________________________________________________________
consensus CTTTCCTTGCTTCTTTTCATACATGAGATAGAGTGCCAAGCAGGCTAGTTCTGATAATTT
 
. : . : . : . : . : . :
JMSF019G06+ GTTGGTTGTCAAGAGTTCAGCGACAGTCTCGTTTCCCAGAACCCTCTCCAATGTTACCAC
JMFF011F22+ GTTGGTTGTCAAGAGTTCAGCGACAGTCTCGTTTCCCAGAACCCTCTCCAATGTTACCAC
JMSF038A24+ GTTGGTTGTCAAGAGTTCAGCGACAGTCTCGTTTCCCAGAACCCTCTCCAATGTTACCAC
                      ____________________________________________________________
consensus GTTGGTTGTCAAGAGTTCAGCGACAGTCTCGTTTCCCAGAACCCTCTCCAATGTTACCAC
 
. : . : . : . : . : . :
JMSF008F24+ TTCGCTGGCGGCAAC
JMSF019G06+ CAACGAGTTTGGCACAGAAAATGCAATATCACCTGTCTGAAGATCTTCGCTGGCGGCAAC
JMFF011F22+ CAACGAGTTTGGCACAGAAAATGCAATATCACCTGTCTGAAGATCTTCGCTGGCGGCAAC
JMSF038A24+ CAACGAGTTTGGCACAGAAAATGCAATATCACCTGTCTGAAGATCTTCGCTGGCGGCAAC
                      ____________________________________________________________
consensus CAACGAGTTTGGCACAGAAAATGCAATATCACCTGTCTGAAGATCTTCGCTGGCGGCAAC
 
. : . : . : . : . : . :
JMSF008F24+ GTAGTGAATGGGGCGATGTTTAGCATTGTGGGAGGGCCTCTCATCAAGCACGACCTTGCA
JMSF019G06+ GTAGTGAATGGGGCGATGTTTAGCATTGTGGGAGGGCCTCTCATCAAGCACGACCTTGCA
JMFF011F22+ GTAGTGAATGGGGCGATGTTTAGCACTGTGGGAGGGCCTCTCATCAAGCACGACCTTGCA
JMSF038A24+ GTAGTGAATGGGGCGATGTTTAGCATTGTGGGAGGGCCTCTCATCAAGCACGACCTTGCA
                      ____________________________________________________________
consensus GTAGTGAATGGGGCGATGTTTAGCATTGTGGGAGGGCCTCTCATCAAGCACGACCTTGCA
 
. : . : . : . : . : . :
JMSF008F24+ AGGAGGGAGTCCGTTGTTGTGCATCCAAGATTTCAAGTCACCCAACTCGTGGTCTTCTGA
JMSF019G06+ AGGAGGGAGTCCGTTGTTGTGCATCCAAGATTTCAAGTCACCCAACTCGTGGTCTTCTGA
JMFF011F22+ AGGAGGGAGTCCGTTGTTGTGCATCCAAGATTTCAAGTCACCCAACTCGTGGTCTTCTGA
JMSF038A24+ AGGAGGGAGTCCGTTGTTGTGCATCCAAGATTTCAAGTCACCCAACTCGTGGTCTTCTGA
                      ____________________________________________________________
consensus AGGAGGGAGTCCGTTGTTGTGCATCCAAGATTTCAAGTCACCCAACTCGTGGTCTTCTGA
 
. : . : . : . : . : . :
JMSF008F24+ CTTTACAGTGACGACCTCGTGGGATTTGTGGTGTCCATTGGGAGAGCCAGCGATGAGGGT
JMSF019G06+ CTTTACAGTGACGACCTCGTGGGATTTGTGGTGTCCATTGGGAGAGCCAGCGATGAGGGT
JMFF011F22+ CTTTACAGTGACGACCTCGTGGGATTTGTGGTGTCCATTGGGAGAGCCAGCGATGAGGGT
JMSF038A24+ CTTTACAGTGACGACCTCGTGGGATTTGTGGTGTCCATTGGGAGAGCCAGCGATGAGGGT
                      ____________________________________________________________
consensus CTTTACAGTGACGACCTCGTGGGATTTGTGGTGTCCATTGGGAGAGCCAGCGATGAGGGT
 
. : . : . : . : . : . :
JMSF008F24+ TTCGGAGTTGGAAGCAGAGCACATGTTCTTCCATCGACGCAAGTTGATGTGTTTGGGATT
JMSF019G06+ TTCGGAGTTGGAAGCAGAGCACATGTTCTTCCATCGACGCAAGTTGATGTGTTTGGGATT
JMFF011F22+ TTCGGAGTTGGAAGCAGAGCACATGTTCTTCCATCGACGCAAGTTGATGTGTTTGGGATT
JMFN002E01+ GTTCTTCCATCGACGCAAGTTGATGTGTTTGGGATT
JMSF038A24+ TTCGGAGTTGGAAGCAGAGCACATGTTCTTCCATCGACGCAAGTTGATGTGTTTGGGATT
                      ____________________________________________________________
consensus TTCGGAGTTGGAAGCAGAGCACATGTTCTTCCATCGACGCAAGTTGATGTGTTTGGGATT
 
. : . : . : . : . : . :
JMSF008F24+ GAAGAGCAAGGAATGGGAAACCCTAGAAAGAGCTAAGAGAGGGCAATGATGAGTGGGAGA
JMSF019G06+ GAAGAGCAAGGAATGGGAAACCCTAGAAAGAGCTAAGAGAGGGCAATGATGAGTGGGAGA
JMFF011F22+ GAAGAGCAAGGAATGGGAAACCCTAGAAAGAGCTAAGAGAGGGCAATGATGAGTGGGAGA
JMFN002E01+ GAAGAGCAAGGAATGGGAAACCCTAGAAAGAGCTAAGAGAGGGCAATGATGAGTGGGAGA
JMSF038A24+ GAAGAGCAAGGAATGGAAAACCCTAGAAAGAGCTAAGAGAGGGCAATGATGAGTGGGAGA
                      ____________________________________________________________
consensus GAAGAGCAAGGAATGGGAAACCCTAGAAAGAGCTAAGAGAGGGCAATGATGAGTGGGAGA
 
. : . : . : . : . : . :
JMSF008F24+ ACGAAACGGAGAAGAAATACATTTGGCTTGAAGATAAGCCACGTCCATGGCGAAAGAATT
JMSF019G06+ ACGAAACGGAGAAGAAATACATTTGGCTTGAAGATAAGCCACGTCCATGGCGAAAGAATT
JMFF011F22+ ACGAAACGGAGAAGAAATACATTTGGCTTGAAGATAAGCCACGTCCATGGCGAAAGAATT
JMFN002E01+ ACGAAACGGAGAAGAAATACATTTGGCTTGAAGATAAGCCACGTCCATGGCGAAAGAATT
JMSF038A24+ ACGAAACGGAGAAGAAATACATTTGGCTTGAAGATAAGCCACGTCCATGGCGAAAGAATT
                      ____________________________________________________________
consensus ACGAAACGGAGAAGAAATACATTTGGCTTGAAGATAAGCCACGTCCATGGCGAAAGAATT
 
. : . : . : . : . : . :
JMSF008F24+ TCAATCCTTCA
JMSF019G06+ TCAATCCTTCACT
JMFF011F22+ TCAATCCTTCACTTGCATAAAGAATAGAAATGATGATTTTTAGGGTTAAAGCTGGGTTGG
JMFN002E01+ TCAATCCTTCACTTGCATAAAGAATAGAAATGATGATTTT
JMSF038A24+ TCAATCCTTCACTTGCATAAAGAATAGAAATGATGATTTTTAGGGTTAAAGCTGGGTTGG
                      ____________________________________________________________
consensus TCAATCCTTCACTTGCATAAAGAATAGAAATGATGATTTTTAGGGTTAAAGCTGGGTTGG
 
. : . : . : . : . : . :
JMFF011F22+ GTGGGTGGATTTTCTCAGGCTGGTGAT
JMSF038A24+ GTGGGTGGATTTTCTCAGGCTGGTGATTTCTGATATGATATTTTTTCTTCAGAGCTTACC
                      ____________________________________________________________
consensus GTGGGTGGATTTTCTCAGGCTGGTGATTTCTGATATGATATTTTTTCTTCAGAGCTTACC