Contig 006629:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O02+                                                                 TGTGAT
                      ____________________________________________________________
consensus                                                                   TGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O02+           TTTTTTTTTCCAGATGTTTTTAAAAGTCAAACACAAAGGTTTTAGAAATTAAGATTTAGA
                      ____________________________________________________________
consensus             TTTTTTTTTCCAGATGTTTTTAAAAGTCAAACACAAAGGTTTTAGAAATTAAGATTTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O02+           AATTAAGATGTGAATCACAAATATTAGGAGCAAGATCGCAAAATGAAAAATACTTAGGGT
                      ____________________________________________________________
consensus             AATTAAGATGTGAATCACAAATATTAGGAGCAAGATCGCAAAATGAAAAATACTTAGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O02+           AAAAATCCTACTGTACACATATCATACCCTGCATGTGTGTTGATTAGGCAGATTCATAGT
                      ____________________________________________________________
consensus             AAAAATCCTACTGTACACATATCATACCCTGCATGTGTGTTGATTAGGCAGATTCATAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O02+           GAAATCAGTGAACTATTAACGATCTAGGAACTTGAGATGCCAAAACATAGAACAAAACTT
                      ____________________________________________________________
consensus             GAAATCAGTGAACTATTAACGATCTAGGAACTTGAGATGCCAAAACATAGAACAAAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037O02+           AAACCTAGAACTTGAAGAAAATAGATCGGAGTATGAAAATAGAAGAAATAAACCTCAAGT
                      ____________________________________________________________
consensus             AAACCTAGAACTTGAAGAAAATAGATCGGAGTATGAAAATAGAAGAAATAAACCTCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014N22+                                    TTACCCNCCGTCGGATTTCATCGTGACATACCCGA
JMSF037O02+           AGGTACTTCATCTCAGTCTCCTCTATTACCCACCGTCGGATTTCATCGTGACATACCCGA
                      ____________________________________________________________
consensus             AGGTACTTCATCTCAGTCTCCTCTATTACCCACCGTCGGATTTCATCGTGACATACCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014N22+           CCGATAAGTAGCAAAGGGAAAACAAAGCAGTATTACCTCAAATATATACCAATNTCAGTT
JMSF037O02+           CCGATAAGTAGCAAAGGGAAAACAAAGCAGTATTACCTCAAATATATACCAATCTCAGTT
                      ____________________________________________________________
consensus             CCGATAAGTAGCAAAGGGAAAACAAAGCAGTATTACCTCAAATATATACCAATCTCAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014N22+           AAGATNGACGTAATTCTGGACTAAACCGAGTATTTAGACACATATCGCTATACTTCTATG
JMSF037O02+           AAGATCGACGTAATTCTGGACTAAACCGAGTATTTAGACACATATCGCTATACTTCTATG
                      ____________________________________________________________
consensus             AAGATCGACGTAATTCTGGACTAAACCGAGTATTTAGACACATATCGCTATACTTCTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014N22+           GAAGAAGTACATGTTCACGNCTGAGATTGAGCAAAAATCTAGAGAGNGAGAGATGTACGA
JMSF037O02+           GAAGAAGTACATGTTCACGGCTGAGATTGAGCAAAAATCTAGAGAGAGAGAGATGTACGA
                      ____________________________________________________________
consensus             GAAGAAGTACATGTTCACGGCTGAGATTGAGCAAAAATCTAGAGAGAGAGAGATGTACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014N22+           TTGCCGGAAAATTATAGAGAGAGGAAGGAAGGGAGAAATTGTGAGACGTTC         
JMSF037O02+           TTGCCGGAAAATTATAGAGAGAGGAAGGAAGGGAGAAATTGTGAGACGTTCTAGAGGGTC
                      ____________________________________________________________
consensus             TTGCCGGAAAATTATAGAGAGAGGAAGGAAGGGAGAAATTGTGAGACGTTCTAGAGGGTC