Contig 006620:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036O15Sequence687006620 (5)ref|XP_006362921.1|3e-111PREDICTED: minor allergen Alt a 7-like [Solanum tuberosum]729006620 (5)ref|XP_004248361.1|7e-98PREDICTED: minor allergen Alt a 7-like [Solanum lycopersicum]
JMSF041C09Sequence184006620 (5)
JMSF046G04Sequence761006620 (5)ref|XP_011097952.1|5e-116PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Sesamum indicu813006620 (5)ref|XP_011097952.1|1e-114PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Sesamum indicu

Alignment

This contig is upended


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rJMSF036O15-                                        GTTATACCAATTGATGCAGATGGAGATATA
rJMSF046G04-                    AAATATACTTGAACCAATTGGTTATACCAATTGATGCAGATGGAGATATA
                      ____________________________________________________________
consensus                       AAATATACTTGAACCAATTGGTTATACCAATTGATGCAGATGGAGATATA
 
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rJMSF036O15-          GTCCTCAATAGCATATAATACACAAAGTGTACACAAGAAAGATTTCACAATCACTGAATC
rJMSF046G04-          GTCCTCAATAGCATATAATACACAAAGTGTACACAAGAAAGATTTCACAATCACTGAATC
                      ____________________________________________________________
consensus             GTCCTCAATAGCATATAATACACAAAGTGTACACAAGAAAGATTTCACAATCACTGAATC
 
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rJMSF036O15-          AAAGATATAAGTTGTAGACGACCTTCGGGAGTTAAAAGATTATAATTAAAAAAGAATGCG
rJMSF046G04-          AAAGATATAAGTTGTAGACGACCTTCGGGAGTTAAAAGATTATAATTAAAAAAGAATGCG
JMSF046G04+             AGATATAAGTNGTAGACGACCTTCGGGAGTTAAAAGATTATAATTAAAAAAGAATGCG
                      ____________________________________________________________
consensus             AAAGATATAAGTTGTAGACGACCTTCGGGAGTTAAAAGATTATAATTAAAAAAGAATGCG
 
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rJMSF036O15-          ACTAGGAATAATGTATGAGAGAAGTAATTAGGCAGCACTCTTGAGCTTCTTGGCGATGGC
rJMSF046G04-          ACTAGGAATAATGTATGAGAGAAGTAATTAGGCAGCACTCTTGAGCTTCTTGGCGATGGC
JMSF046G04+           ACTAGGAATAATGTATGAGAGAAGTAATTAGGCAGCACTCTTGAGCTTCTTGGCGATGGC
                      ____________________________________________________________
consensus             ACTAGGAATAATGTATGAGAGAAGTAATTAGGCAGCACTCTTGAGCTTCTTGGCGATGGC
 
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rJMSF036O15-          GGCAATGTATTTCCCCTGGTGTAAAGCCTGCTGTAGTTCGAGTTCAGATGGCTGTCTGGA
rJMSF046G04-          GGCAATGTATTTCCCCTGGTGTAAAGCCTGCTGTAGTTCGAGTTCAGATGGCTGTCTGGA
JMSF046G04+           GGCAATGTATTTCCCCTGGTGTAAAGCCTGCTGTAGTTCGAGTTCAGATGGCTGTCTGGA
JMSF036O15+                                            TAGTTCGAGTTCAGATGGCTGTCTGGA
                      ____________________________________________________________
consensus             GGCAATGTATTTCCCCTGGTGTAAAGCCTGCTGTAGTTCGAGTTCAGATGGCTGTCTGGA
 
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rJMSF036O15-          GCCGTCCCCTGCGTAAGTTCCAGCACCGTAAGGACTTCCACCTTTGACACTCTCCATTTC
rJMSF046G04-          GCCGTCCCCTGCGTAAGTTCCAGCACCGTAAGGACTTCCACCTTTGACACTCTCCATTTC
JMSF046G04+           GCCGTCCCCTGCGTAAGTTCCAGCACCGTAAGGACTTCCACCTTTGACACTCTCCATTTC
JMSF036O15+           GCCGTCCCCTGCGTAAGTTCCAGCACCGTAAGGACTTCCACCTTTGACACTCTCCATTTC
                      ____________________________________________________________
consensus             GCCGTCCCCTGCGTAAGTTCCAGCACCGTAAGGACTTCCACCTTTGACACTCTCCATTTC
 
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rJMSF036O15-          GAACATGCCAGCACCAAATGTGTATCCAATGGGCACAAAGATCATCCCATGGTGAACGAG
rJMSF046G04-          GAACATGCCAGCACCAAATGTGTATCCAATGGGCACAAAGATCATCCCATGGTGAACGAG
JMSF046G04+           GAACATGCCAGCACCAAATGTGTATCCAATGGGCACAAAGATCATCCCATGGTGAACGAG
JMSF036O15+           GAACATGCCAGCACCAAATGTGTATCCAATGGGCACAAAGATCATCCCATGGTGAACGAG
                      ____________________________________________________________
consensus             GAACATGCCAGCACCAAATGTGTATCCAATGGGCACAAAGATCATCCCATGGTGAACGAG
 
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rJMSF036O15-          CTGAGTGATGGCAGTCAAGGGTGTTGTCTCCTGCCCACCACCTTGGGATCCAGTGCTGTA
rJMSF046G04-          CTGAGTGATGGCAGTCAAGGGTGTTGTCTCCTGCCCACCACCTTGGGATCCAGTGCTGTA
JMSF046G04+           CTGAGTGATGGCAGTCAAGGGTGTTGTCTCCTGCCCACCACCTTGGGATCCAGTGCTGTA
JMSF036O15+           CTGAGTGATGGCAGTCAAGGGTGTTGTCTCCTGCCCACCACCTTGGGATCCAGTGCTGTA
                      ____________________________________________________________
consensus             CTGAGTGATGGCAGTCAAGGGTGTTGTCTCCTGCCCACCACCTTGGGATCCAGTGCTGTA
 
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rJMSF036O15-          GAATATGCCAGCAGGCTTGCCAGCCAGCTGTTGTGTTCTCCATAGACCTCCAGTTGCATC
rJMSF046G04-          GAATATGCCAGCAGGCTTGCCAGCCAGCTGTTGTGTTCTCCATAGACCTCCAGTTGCATC
JMSF046G04+           GAATATGCCAGCAGGCTTGCCAGCCAGCTGTTGTGTTCTCCATAGACCTCCAGTTGCATC
JMSF036O15+           GAATATGCCAGCAGGCTTGCCAGCCAGCTGTTGTGTTCTCCATAGACCTCCAGTTGCATC
                      ____________________________________________________________
consensus             GAATATGCCAGCAGGCTTGCCAGCCAGCTGTTGTGTTCTCCATAGACCTCCAGTTGCATC
 
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rJMSF036O15-          AAGAAATGCTTTAAACTGAGCAGCCATCATGCCGAACCTTGTAGGGAAGCCAAAAACAAA
rJMSF046G04-          AAGAAATGCTTTAAACTGAGCAGCCATCATGCCGAACCTTGTAGGGAAGCCAAAAACAAA
JMSF046G04+           AAGAAATGCTTTAAACTGAGCAGCCATCATGCCGAACCTTGTAGGGAAGCCAAAAACAAA
JMSF036O15+           AAGAAATGCTTTAAACTGAGCAGCCATCATGCCGAACCTTGTAGGGAAGCCAAAAACAAA
                      ____________________________________________________________
consensus             AAGAAATGCTTTAAACTGAGCAGCCATCATGCCGAACCTTGTAGGGAAGCCAAAAACAAA
 
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rJMSF036O15-          GCCATCAGCCTCAGCCAGGTCATTAGGTGTAATAATAGGTACATCACTCTTTGGAGGCGC
rJMSF046G04-          GCCATCAGCCTCAGCCAGGTCATTAGGTGTAATAATAGGTACATCACTCTTTGGAGGCGC
JMSF046G04+           GCCATCAGCCTCAGCCAGGTCATTAGGTGTAATAATAGGTACATCACTCTTTGGAGGCGC
JMSF036O15+           GCCATCAGCCTCAGCCAGGTCATTAGGTGTAATAATAGGTACATCACTCTTTGGAGGCGC
                      ____________________________________________________________
consensus             GCCATCAGCCTCAGCCAGGTCATTAGGTGTAATAATAGGTACATCACTCTTTGGAGGCGC
 
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rJMSF036O15-          ACTCATTTTTGCTAGAACCTCATCTGACAGAGTTTCAGGCACTTGCCACAGTTTGGCTTC
rJMSF046G04-          ACTCATTTTTGCTAGAACCTCATCTGACAGAGTTTCAGGCACTTGCCACAGTTTGGCTTC
JMSF046G04+           ACTCATTTTTGCTAGAACCTCATCTGACAGAGTTTCAGGCACTTGCCACAGTTTGGCTTC
JMSF036O15+           ACTCATTTTTGCTAGAACCTCATCTGACAGAGTTTCAGGCACTTGCCACAGTTTGGCTTC
                      ____________________________________________________________
consensus             ACTCATTTTTGCTAGAACCTCATCTGACAGAGTTTCAGGCACTTGCCACAGTTTGGCTTC
 
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rJMSF036O15-          AACACCTTCAACAGATGAAGCCCC                                    
rJMSF046G04-          AACACCTTCAACAGATGAAGCCCCTTTCTTTATCTCTTCTGCTAGTTTCTCCACATGTCC
JMSF046G04+           AACACCTTCAACAGATGAAGCCCCTTTCTTTATCTCTTCTGCTAGTTTCTCCACATGTCC
JMSF036O15+           AACACCTTCAACAGATGAAGCCCCTTTCTTTATCTCTTCTGCTAGTTTCTCCACATGTCC
                      ____________________________________________________________
consensus             AACACCTTCAACAGATGAAGCCCCTTTCTTTATCTCTTCTGCTAGTTTCTCCACATGTCC
 
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rJMSF046G04-          ATACATAGAGTAATATACGATGTAAACTTTGG                            
JMSF046G04+           ATACATAGAGTAATATACGATGTAAACTTTGGCAGCCATTATCAATCTGATTAGAGCGGA
JMSF041C09+                           ACGATGTAAACTTTGGCAGCCATTATCAATCTGATTAGAGCGGA
JMSF036O15+           ATACATAGAGTAATATACGATGTAAACTTTGGCAGCCATTATCAATCTGATTAGAGCGGA
                      ____________________________________________________________
consensus             ATACATAGAGTAATATACGATGTAAACTTTGGCAGCCATTATCAATCTGATTAGAGCGGA
 
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JMSF046G04+           GAGAATTTCGAGTTTCGGTGTGGCTAGAGAGCGTTGACGA                    
JMSF041C09+           GAGAATTTCGAGTTTCGGTGTGGCTAGAGAGCGTTGACGA                    
JMSF036O15+           GAGAATTTCGAGTTTCGGTGTGGCTAGAGAGCGTTGACGACTGAGCGCCAGATGGCTAAG
                      ____________________________________________________________
consensus             GAGAATTTCGAGTTTCGGTGTGGCTAGAGAGCGTTGACGACTGAGCGCCAGATGGCTAAG
 
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JMSF036O15+           CCTCCCTATTTATAGTAGCTCGCCTTTGAGTGATGAATGTTTTAAACAAAACTGCGGATC
                      ____________________________________________________________
consensus             CCTCCCTATTTATAGTAGCTCGCCTTTGAGTGATGAATGTTTTAAACAAAACTGCGGATC