Contig 006611:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF034L18+                                                             CTCGGGATTT
JMSF035L17+                                                             CTCGGGATTT
                      ____________________________________________________________
consensus                                                               CTCGGGATTT
 
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JMSF034L18+           GATCCTGTTTATAAATATAGAATCAGCAACTGATCGGGATGCTGGAGATGGAACTGTACA
JMSF035L17+           GATCCTGTTTATAAATATAGAATCAGCAACTGATCGGGATGCTGGAGATGGAACTGTACA
                      ____________________________________________________________
consensus             GATCCTGTTTATAAATATAGAATCAGCAACTGATCGGGATGCTGGAGATGGAACTGTACA
 
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JMSF034L18+           GCTGCCAGCTGATGGACTCCTAATACAGTCTTTTGCAGCTAGTTCTTGTGCTCTGGATAA
JMSF035L17+           GCTGCCAGCTGATGGACTCCTAATACAGTCTTTTGCAGCTAGTTCTTGTGCTCTGGATAA
                      ____________________________________________________________
consensus             GCTGCCAGCTGATGGACTCCTAATACAGTCTTTTGCAGCTAGTTCTTGTGCTCTGGATAA
 
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JMSF034L18+           GTATGATATGCCATCATTTATGCAAGCATTAAAGTCGAAACCTTCTCGAGCAATAGAGAT
JMSF035L17+           GTATGATATGCCATCATTTATGCAAGCATTAAAGTCGAAACCTTCTCGAGCAATAGAGAT
                      ____________________________________________________________
consensus             GTATGATATGCCATCATTTATGCAAGCATTAAAGTCGAAACCTTCTCGAGCAATAGAGAT
 
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JMSF034L18+           CAAATACGATGATTGGCACGAAAAACTGTAAGAAGGCATCCCTGTTTTCAGCTCATCCCT
JMSF035L17+           CAAATACGATGATTGGCACGAAAAACTGTAAGAAGGCATCCCTGTTTTCAGCTCATCCCT
                      ____________________________________________________________
consensus             CAAATACGATGATTGGCACGAAAAACTGTAAGAAGGCATCCCTGTTTTCAGCTCATCCCT
 
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JMSF034L18+           TGGGAACAAATGAAAATTGTATGGGGAAGCAATGAGTTTGGACTCCCTGAGAGAGAAAGG
JMSF035L17+           TGGGAACAAATGAAAATTGTATGGGGAAGCAATGAGTTTGGACTCCCTGAGAGAGAAAGG
                      ____________________________________________________________
consensus             TGGGAACAAATGAAAATTGTATGGGGAAGCAATGAGTTTGGACTCCCTGAGAGAGAAAGG
 
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JMSF034L18+           GCAAACGGCGAATTGAAGAATCTGGTACCGTTCGGCAGCGCGCTTAGCTTTGAGATAAGC
JMSF035L17+           GCAAACGGCGAATTGAAGAATCTGGTACCGTTCGGCAGCGCGCTTAGCTTTGAGATAAGC
                      ____________________________________________________________
consensus             GCAAACGGCGAATTGAAGAATCTGGTACCGTTCGGCAGCGCGCTTAGCTTTGAGATAAGC
 
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JMSF034L18+           GATTTCGGCGGTGTCGAAGGGGAGCAGCCGTTGCCAAGGGGAAGAGTAAGCGCCGGTCGT
JMSF035L17+           GATTTCGGCGGTGTCGAAGGGGAGCAGCCGTTGCCAAGGGGAAGAGTAAGCGCCGGTCGT
                      ____________________________________________________________
consensus             GATTTCGGCGGTGTCGAAGGGGAGCAGCCGTTGCCAAGGGGAAGAGTAAGCGCCGGTCGT
 
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JMSF034L18+           CTGTAACGACACGGCGATGAAATCGGACTCGGTTATGCGGGTCTCGATATCGTTCAGTGC
JMSF035L17+           CTGTAACGACACGGCGATGAAATCGGACTCGGTTATGCGGGTCTCGATATCGTTCAGTGC
                      ____________________________________________________________
consensus             CTGTAACGACACGGCGATGAAATCGGACTCGGTTATGCGGGTCTCGATATCGTTCAGTGC
 
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JMSF034L18+           CTCGGAGAAGTTGGACTTGGTAACTTGTTTGATGCCCCATTTGCCGTAGTTGCTACCGCC
JMSF035L17+           CTCGGAGAAGTTGGACTTGGTAACTTGTTTGATGCCCCATTTGCCGTAGTTGCTACCGCC
                      ____________________________________________________________
consensus             CTCGGAGAAGTTGGACTTGGTAACTTGTTTGATGCCCCATTTGCCGTAGTTGCTACCGCC
 
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JMSF034L18+           GGAGTTTGGCCGGAAAGCTGTTTCGGAAATAGCAGTGCAAAATAAGCGTCTCTGTAACAT
JMSF035L17+           GGAGTTTGGCCGGAAAGCTGTTTCGGAAATAGCAGTGCAAAATAAGCGTCTCTGTAACAT
                      ____________________________________________________________
consensus             GGAGTTTGGCCGGAAAGCTGTTTCGGAAATAGCAGTGCAAAATAAGCGTCTCTGTAACAT
 
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JMSF034L18+           TGAACACAGAATCGAAACAGAGCTGCAGTTCAGAGC                        
JMSF035L17+           TGAACACAGAATCGAAACAGAGCTGCAGTTCAGAGCGGAGACGAAAGGGAAGAGTTGGTC
                      ____________________________________________________________
consensus             TGAACACAGAATCGAAACAGAGCTGCAGTTCAGAGCGGAGACGAAAGGGAAGAGTTGGTC