Contig 006607:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010H11Sequence264006607 (3)ref|XP_009762240.1|112PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris]
JMSF026F21Sequence600006607 (3)ref|XP_009762240.1|284PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris]
JMSF034P15Sequence685006607 (3)ref|XP_009762240.1|306PREDICTED: uncharacterized protein LOC104214286 [Nicotiana sylvestris]136023574

Alignment

This contig is upended


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JMSF034P15+                                              ACTAAAGTTTCAATCAAAATGTTGT
                      ____________________________________________________________
consensus                                                ACTAAAGTTTCAATCAAAATGTTGT
 
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JMSF034P15+           ATAATGATGACACAGTAAAAAAGCTCATTTGTAGGCAGCCATGCCCACACTGGCTTCTCC
                      ____________________________________________________________
consensus             ATAATGATGACACAGTAAAAAAGCTCATTTGTAGGCAGCCATGCCCACACTGGCTTCTCC
 
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JMSF026F21+           AACGTAAGGTCCAACACTTCCTCTGGCTTTGGAGTAGGAAACATAGTAGAACTCCGAGAC
JMSF034P15+           AACGTAAGGTCCAACACTTCCTCTGGCTTTGGAGTAGGAAACATAGTAGAACTCCGAGAC
                      ____________________________________________________________
consensus             AACGTAAGGTCCAACACTTCCTCTGGCTTTGGAGTAGGAAACATAGTAGAACTCCGAGAC
 
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JMSF026F21+           TATGGCAGTGAAGAACACAAAAGCTGCTCCTGCTCCAAACACCCCCTTTCTAACTGTCTC
JMSF034P15+           TATGGCAGTGAAGAACACAAAAGCTGCTCCTGCTCCAAACACCCCCTTTCTAACTGTCTC
                      ____________________________________________________________
consensus             TATGGCAGTGAAGAACACAAAAGCTGCTCCTGCTCCAAACACCCCCTTTCTAACTGTCTC
 
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JMSF026F21+           GCAGGATACCGGTTGGTCGTTGATTAGGTACGATGATCTGTACTTGGTGTGATAAGCATT
JMSF034P15+           GCAGGATACCGGTTGGTCGTTGATTAGGTACGATGATCTGTACTTGGTGTGATAAGCATT
                      ____________________________________________________________
consensus             GCAGGATACCGGTTGGTCGTTGATTAGGTACGATGATCTGTACTTGGTGTGATAAGCATT
 
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JMSF026F21+           CCTCACTGAACCAGCCAGCAGACATACCTCCGCAATGAAGAATGTCACCCAGCAGATAAT
JMSF034P15+           CCTCACTGAACCAGCCAGCAGACATACCTCCGCAATGAAGAATGTCACCCAGCAGATAAT
                      ____________________________________________________________
consensus             CCTCACTGAACCAGCCAGCAGACATACCTCCGCAATGAAGAATGTCACCCAGCAGATAAT
 
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JMSF026F21+           GAATAGGAGAACTGCACAAGCCCGTGAACCTCCGGGGCTCAAAGCCTTTCCAAAGCAGAA
JMSF034P15+           GAATAGGAGAACTGCACAAGCCCGTGAACCTCCGGGGCTCAAAGCCTTTCCAAAGCAGAA
                      ____________________________________________________________
consensus             GAATAGGAGAACTGCACAAGCCCGTGAACCTCCGGGGCTCAAAGCCTTTCCAAAGCAGAA
 
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JMSF026F21+           GCAGCGGCTGGCCACCATGATTAGAACTTGACTAGCCATTAGAAACAGGAAGGCACCCAC
JMSF010H11+                                             GCCATTAGAAACAGGAAGGCACCCAC
JMSF034P15+           GCAGCGGCTGGCCACCATGATTAGAACTTGACTAGCCATTAGAAACAGGAAGGCACCCAC
                      ____________________________________________________________
consensus             GCAGCGGCTGGCCACCATGATTAGAACTTGACTAGCCATTAGAAACAGGAAGGCACCCAC
 
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JMSF026F21+           ACCAAAACCAGTTAAAATGTCAGAGTCATAGACACAGTAGCTGTAGGTCTGTTCCTCATC
JMSF010H11+           ACCAAAACCAGTTGAAATGTCAGAGTCATAGACACAGTAGCTGTAGGTCTGTTCCTCATC
JMSF034P15+           ACCAAAACCAGTTGAAATGTCAGAGTCATAGACACAGTAGCTGTAGGTCTGTTCCTCATC
                      ____________________________________________________________
consensus             ACCAAAACCAGTTGAAATGTCAGAGTCATAGACACAGTAGCTGTAGGTCTGTTCCTCATC
 
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JMSF026F21+           CATTTGGATCTTGGCAGTACTTCTTCTCTGCTCAGCACCAACGGCTAAACCAAAAGCAAT
JMSF010H11+           CATTTGGATCTTGGCAGTACTTCTTCTCTGCTCAGCACCAACGGCTAAACCAAAAGCAAT
JMSF034P15+           CATTTGGATCTTGGCAGTACTTCTTCTCTGCTCAGCACCAACGGCTAAACCAAAAGCAAT
                      ____________________________________________________________
consensus             CATTTGGATCTTGGCAGTACTTCTTCTCTGCTCAGCACCAACGGCTAAACCAAAAGCAAT
 
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JMSF026F21+           AAGATCAAATACAAAGACAGTGATCATTAACACCTTGGAAGCCATTGTTGGAGAGAGGTT
JMSF010H11+           AAGATCAAATACAAAGACAGTGATCATTAACACCTTGGAAGCCATTGTTGGAGAGAGGTT
JMSF034P15+           AAGATCAAATACAAAGACAGTGATCATTAACACCTTGGAAGCCATTGTTGGAGAGAGGTT
                      ____________________________________________________________
consensus             AAGATCAAATACAAAGACAGTGATCATTAACACCTTGGAAGCCATTGTTGGAGAGAGGTT
 
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JMSF026F21+           GAAGCTTCAGTTCCTCCCTGCCAAAGATCTAGATCTCTCTCTTCCTCACCGTAACTC   
JMSF010H11+           GAAGCTTCAGTTCCTCCCTGCCAAAGATCTAGATCTCTCTCTTCCTCACCGTAACTC   
JMSF034P15+           GAAGCTTCAGTTCCTCCCTGCCAAAGATCTAGATCTCTCTCTTCCTCACCGTAACTCCGC
                      ____________________________________________________________
consensus             GAAGCTTCAGTTCCTCCCTGCCAAAGATCTAGATCTCTCTCTTCCTCACCGTAACTCCGC