| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN007F14 | Sequence | 403 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 3e-29 | proteinase inhibitor [Ipomoea batatas] | |||||
| JMFN009O13 | Sequence | 370 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 4e-25 | proteinase inhibitor [Ipomoea batatas] | |||||
| JMFN011I22 | Sequence | 402 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 7e-28 | proteinase inhibitor [Ipomoea batatas] | |||||
| JMFN031A18 | Sequence | 357 | 006596 (10) | gb|AAK72906.1| | 1e-24 | proteinase inhibitor SPLTI-2 [Ipomoea batatas] | |||||
| JMFN036E22 | Sequence | 391 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 8e-32 | proteinase inhibitor [Ipomoea batatas] | |||||
| JMFN037B16 | Sequence | 400 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 3e-29 | proteinase inhibitor [Ipomoea batatas] | |||||
| JMFS049D01 | Sequence | 406 | 006596 (10) | gb|AAK72906.1| | 2e-25 | proteinase inhibitor SPLTI-2 [Ipomoea batatas] | |||||
| JMFS052E03 | Sequence | 377 | 006596 (10) | gb|AAK72906.1| | 5e-25 | proteinase inhibitor SPLTI-2 [Ipomoea batatas] | |||||
| JMSF033K09 | Sequence | 420 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 4e-28 | proteinase inhibitor [Ipomoea batatas] | 380 | 006596 (10) | gb|AAK95644.1|AF404833_1 | 3e-28 | proteinase inhibitor [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMFN031A18+ AAAG
JMFN011I22+ AAAG
JMFN036E22+ AAAG
JMFS049D01+ GATAAAG
JMFN037B16+ AAG
JMFN007F14+ AAAG
____________________________________________________________
consensus GATAAAG
. : . : . : . : . : . :
JMFS052E03+ GTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFN031A18+ AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFN011I22+ AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFN009O13+ TTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFN036E22+ AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFS049D01+ AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFN037B16+ AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
JMFN007F14+ AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
rJMSF033K09- AGGATTCATAGTCCAAC
JMSF033K09+ TGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
____________________________________________________________
consensus AAAGCAGATGTTTATTTGCCACTCTTATTTAAGGATAAAGCTAAGGATTCATAGTCCAAC
. : . : . : . : . : . :
JMFS052E03+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
JMFN031A18+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
JMFN011I22+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
JMFN009O13+ ATGCAGTTGATGAAGTCCAT-GTTCTACATTTATTGTTGGGATTGGTAGGGTTACAACAT
JMFN036E22+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCTGGTAGGGTTACAACAT
JMFS049D01+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
JMFN037B16+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
JMFN007F14+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
rJMSF033K09- ATGGAGTTGATGAAGTCCATGGTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
JMSF033K09+ ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
____________________________________________________________
consensus ATGGAGTTGATGAAGTCCAT-GTTTTACATTTATTGTTGGGGCAAGCAGGGTTACAACAT
. : . : . : . : . : . :
JMFS052E03+ CCACTTCATTTTGAATATACTAGATTAGCCGGTCACCGGAGTGCTTATGACAACGTTGCT
JMFN031A18+ CCACTTCATTTTGAATATACTAGATTAGCCGGTCACCGGAGTGCTTATGACAACGTTGCT
JMFN011I22+ CCACTTCATTTTGAATATACTAGATTAGGCGGTCACCGGAGTTCTTATGACAACATTGCT
JMFN009O13+ CCACTTGATTT---ACCCACTAGATTAGCCGGTCACCGAAGTCCATATGACAGCGTTGCT
JMFN036E22+ CCACTTGATTT---GCCGACTAGATTAGCCGGTCACCGGAGTCCTTATGACAACGTTGCT
JMFS049D01+ CCACTTCATTTTGAATATACTAGATTAGCCGGTCACCGGAGTGCTTATGACAACGTTGCT
JMFN037B16+ CCACTTCATTTTGAATATACTAGATTAGGCGGTCACCGGAGTTCTTATGACAACATTGCT
JMFN007F14+ CCACTTCATTTTGAATATACTAGATTAGGCGGTCACCGGAGTTCTTATGACAACATTGCT
rJMSF033K09- CCACTTCATTTTGAATATACTAGATTAGGCGGTCACCGGAGTTCTTATGACAACATTGCT
JMSF033K09+ CCACTTCATTTTGAATATACTAGATTAGGCGGTCACCGGAGTTCTTATGACAACATTGCT
____________________________________________________________
consensus CCACTTCATTTTGAATATACTAGATTAGGCGGTCACCGGAGTTCTTATGACAACATTGCT
. : . : . : . : . : . :
JMFS052E03+ ACAGTCGACGAAAATACGAACTCGCCAAGGCCTATAATCCAGTGTTATGGGGCAGTCTTG
JMFN031A18+ ACAGTCGACGAAAATACGAACTCGCCAAGGCCTATAATCCAGTGTTATGGGGCAGTCTTG
JMFN011I22+ ACAGTCGACGAAAAGACGAACTCGCCAAGGCTTATAATCCGGGGTTACGGGGCAGTTTTG
JMFN009O13+ ACAGTCGACGAAAAGACTAACTCGGTCAAGCCTATAATCCCTGGTTACGGGGCAGTTATG
JMFN036E22+ ACAGTCGACGAAAAGACGAACTCGGTCAAGCCTATAATCCCTGGTTACGGGGCAGTTATG
JMFS049D01+ ACAGTCGACGAAAATACGAACTCGCCAAGGCCTATAATCCAGTGTTATGGGGCAGTCTTG
JMFN037B16+ ACAGTCGACGAAAAGACGAACTCGCCAAGGCTTATAATCCGGGGTTACGGGGCAGTTTTG
JMFN007F14+ ACAGTCGACGAAAAGACGAACTCGCCAAGGCTTATAATCCGGGGTTACGGGGCAGTTTTG
rJMSF033K09- ACAGTCGACGAAAAGACGAACTCGCCAAGGCTTATAATCCGGGGTTACGGGGCAGTTTTG
JMSF033K09+ ACAGTCGACGAAAAGACGAACTCGCCAAGGCTTATAATCCGGGGTTACGGGGCAGTTTTG
____________________________________________________________
consensus ACAGTCGACGAAAAGACGAACTCGCCAAGGCTTATAATCCGGGGTTACGGGGCAGTTTTG
. : . : . : . : . : . :
JMFS052E03+ GAAAACCACCACAACATCCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTTGCTAAAAA
JMFN031A18+ GAAAACCACCACAACATCCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTTGCTAAAAA
JMFN011I22+ GAAAACCATCACAACATGCAAGTCGCTGTTTTCTTTCTCAATCGTAATTTTGGCTAAAAA
JMFN009O13+ GTAAGCCCCCTCAACATTCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTTGCTAAAAA
JMFN036E22+ GTAAACCACCACAACATTCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTTGCTAAAAA
JMFS049D01+ GAAAACCACCACAACATCCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTTGCTAAAAA
JMFN037B16+ GAAAACCATCACAACATGCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTGGCTAAAAA
JMFN007F14+ GAAAACCATCACAACATGCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTGGCTAAAAA
rJMSF033K09- GAAAACCATCACAACATGCAAGTCGCTGTTTTCTTTCCCAATCGTAGATTTGGCTAAAAA
JMSF033K09+ GAAAACCATCACAACATGCAAGTCGCTGTTTTCTTTCCCAATCGTAGATTTGGCTAAAAA
____________________________________________________________
consensus GAAAACCATCACAACATGCAAGTCGCTGTTTTCTTTCTCAATCGTAGATTTGGCTAAAAA
. : . : . : . : . : . :
JMFS052E03+ TCCATCCACTCCCACCAGCTCCGGCCAGCTATTCTTACCGTCGGCGATGCGCGGCATCTT
JMFN031A18+ TCCATCCACTCCCACCAGCTCCGGCCAGCTATTCTTACCGTCGGTGATGCGCGG
JMFN011I22+ TGCGTCCACTCCCACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCGGCATCTT
JMFN009O13+ TGCATCCACTCCGCCCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGGTGCATCTT
JMFN036E22+ TGCATCCACTCCGACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCTGCATCTT
JMFS049D01+ TCCATCCACTCCCACCAGCTCCGGCCAGCTATTCTTACCGTCGGTGATGCGCGGCATCTT
JMFN037B16+ TGCGTCCACTCCCACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCGGCATCTT
JMFN007F14+ TGCGTCCACTCCCACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCGGCATCTT
rJMSF033K09- TGCGTCCACTCCCACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCGGCATCTT
JMSF033K09+ TGCGTCCACTCCCACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCGGCATCTT
____________________________________________________________
consensus TGCGTCCACTCCCACCAGTTCCGGCCAGCTACTCTTACCGTCGGTGATGCGCGGCATCTT
. : . : . : . : . : . :
JMFS052E03+ CTTGAATTGATGTTTGGAGCCTGGAT
JMFN011I22+ CTTGAATTGATGTTTGGAGC
JMFN009O13+ CTTGA
JMFN036E22+ CTTGA
JMFS049D01+ CTTGAATTGATGTTTGGAGCCTGGAT
JMFN037B16+ CTTGAATTGATGTTTGGAGCCTGGATGGGTTAAGTTGT
JMFN007F14+ CTTGAATTGATGTTTGGAGCCTGGATGGGTTAAGTTGT
rJMSF033K09- CTTGAATTGATGTTTGGAGCCTGGATGGGTTAAGTTGTTCTTTGCCTCTCTTTGTGGTTC
JMSF033K09+ CTTGAATTGATGTTTGGAGCCTGGATGGGTTAAGTTGTTCTTTGCCTCTCTTTGTGGTTC
____________________________________________________________
consensus CTTGAATTGATGTTTGGAGCCTGGATGGGTTAAGTTGTTCTTTGCCTCTCTTTGTGGTTC