Contig 006591:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF028A24+                                                 CACCAGAAATGCTGCCAATTTT
JMSF032N02+                                               TTCACCAGAAATGCTGCCAATTTT
                      ____________________________________________________________
consensus                                                 TTCACCAGAAATGCTGCCAATTTT
 
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JMFS114G11+                                  AGGAAAGCAAGGCATTTTCCACTAATTAACTCTTCTT
JMSF028A24+           CAACTTCCAACAGACAATTCGAGAGGAAAGCAAGGCATTTTCCACTAATTAACTCTTCTT
JMSF032N02+           CAACTTCCAACAGACAATTCGAGAGGAAAGCAATGCATTTTCCACTAATTAACTCTTCTT
                      ____________________________________________________________
consensus             CAACTTCCAACAGACAATTCGAGAGGAAAGCAAGGCATTTTCCACTAATTAACTCTTCTT
 
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JMFS114G11+           CTCAACAACTCGATGCTCCTTAAATCCTCTCCAGAGTTCTTAAATTTCAACGTTTTTAGA
JMSF028A24+           CTCAACAACTCGATGCTCCTTAAATCCTCTCCAGAGTTCTTAAATTTCAACGTTTTTAGA
JMSF032N02+           CTCAACAACTCGATGCTCCTTAAATCCTCTCCAGAGTTCTTAAATTTCAACGTTTTTAGA
                      ____________________________________________________________
consensus             CTCAACAACTCGATGCTCCTTAAATCCTCTCCAGAGTTCTTAAATTTCAACGTTTTTAGA
 
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JMFS114G11+           GAATGAAAACACACACTTAAGTCCTTGAAACTTCAATTCTCCCAGCTTATTGTACAGAAA
JMSF028A24+           GAATGAAAACACACACTTAAGTCCTTGAAACTTCAATTCTCCCAGCTTATTGTACAGAAA
JMSF032N02+           GAATGAAAACACACACTTAAGTCCTTGAAACTTCAATTCTCCCAGCTTATTGTACAGAAA
                      ____________________________________________________________
consensus             GAATGAAAACACACACTTAAGTCCTTGAAACTTCAATTCTCCCAGCTTATTGTACAGAAA
 
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JMFS114G11+           GTGTAAAGATAGACAAAACGAAATTTAAAAACGAACCCTAGATTGAAGTTTTTTTAGACA
JMSF028A24+           GTGTAAAGATAGACAAAACGAAATTTAAAAACGAACCCTAGATTGAAGTTTTTTTAGACA
JMSF032N02+           GTGTAAAGATAGACAAAACGAAATTTAAAAACGAACCCTAGATTGAAGTTTTTTTAGACA
                      ____________________________________________________________
consensus             GTGTAAAGATAGACAAAACGAAATTTAAAAACGAACCCTAGATTGAAGTTTTTTTAGACA
 
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JMFS114G11+           GCCCTTAACTTACAATATAGCGGCCTGCACGGGGGTACGGTATTATCGGTATCTTCGTAA
JMSF028A24+           GCCCTTAACTTACAATATAGCGGCCTGCACGGGGGTACGGTATTATCGGTATCTTCGTAA
JMSF032N02+           GCCNTTAACTTACAATATAGCGGCCTGCACGGGGGTACGGTATTATCGGTATCTTCGTAA
                      ____________________________________________________________
consensus             GCCCTTAACTTACAATATAGCGGCCTGCACGGGGGTACGGTATTATCGGTATCTTCGTAA
 
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JMFS114G11+           ACCGTCGAGCTATTCGATTCACGGCGCCAAGTCCTCCACGCATATCAAAAACCAACGAAA
JMSF028A24+           ACCGTCGAGCTATTCGATTCACGGCGCCAAGTCCTCCACGCATCTCAAAAACCAACGAAA
JMSF032N02+           ACCGTCGAGCTATTCGATTCACGGCGCCAAGTCCTCCACGCATCTCAAAAACCAACGAAA
                      ____________________________________________________________
consensus             ACCGTCGAGCTATTCGATTCACGGCGCCAAGTCCTCCACGCATCTCAAAAACCAACGAAA
 
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JMFS114G11+           GCGAGCACGAATCTATCATTTCCATCAACATCTCCATAAAAGCTTCAATACAAGAGAGAG
JMSF028A24+           GCGAGCACGAATCTATCATTTCCATCAACATCTCCATAAAAGCTTCAATACAAGAGAGAG
JMSF032N02+           GCGAGCACGAATCTATCATTTCCATCAACATCTCCATAAAAGCTTCAATACAAGAGAGAG
                      ____________________________________________________________
consensus             GCGAGCACGAATCTATCATTTCCATCAACATCTCCATAAAAGCTTCAATACAAGAGAGAG
 
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JMFS114G11+           AAATAACAGAGAGGGGAACAAAGAACCAAAAATCACGATTTGAGAGCCGGCGTTCACAGA
JMSF028A24+           AAATAACAGAGAGGGGAACAAAGAACCAAAAATCACGATTTGAGAGCCGGCGTTCACAGA
JMSF032N02+           AAATAACAGAGAGGGGAACAAAGAACCAAAAATCACGATTTGAGAGCCGGCGTTCACAGA
                      ____________________________________________________________
consensus             AAATAACAGAGAGGGGAACAAAGAACCAAAAATCACGATTTGAGAGCCGGCGTTCACAGA
 
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JMFS114G11+           AACTTAGTGTATACGTACAGAATTGTATGTATATGTGGAGAGGGAGAATTTGGGAGGGAA
JMSF028A24+           AACTTAGTGTATACGTACAGAATTGTATGTATATGTGGAGAGGGAGAATTTGGGAGGGAA
JMSF032N02+           AACTTAGTGTATACGTACAGAATTGTATGTATATGTGGAGAGGGAGAATTTGGGAGGGAA
                      ____________________________________________________________
consensus             AACTTAGTGTATACGTACAGAATTGTATGTATATGTGGAGAGGGAGAATTTGGGAGGGAA
 
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JMFS114G11+           GGGGAAAAGGGTTCAGATTAAAGGGAGGGAGAAATT                        
JMSF028A24+           GGGGAAAAGGGTTCAGATTAAAGGGAGGGAGAAATTGAAACCAAATGACGAA        
JMSF032N02+           GGGGAAAAGGGTTCAGATTAAAGGGAGGGTGAAATTGAAACCAAATGACGAATGCGTTTC
                      ____________________________________________________________
consensus             GGGGAAAAGGGTTCAGATTAAAGGGAGGGAGAAATTGAAACCAAATGACGAATGCGTTTC