Contig 006588:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001D06Sequence501006588 (3)emb|CBI17617.3|4e-75unnamed protein product [Vitis vinifera]663020134ref|XP_009800041.1|91.3PREDICTED: uncharacterized protein LOC104246018 [Nicotiana sylvestris]
JMSF032C22Sequence689006588 (3)gb|KJB26851.1|8e-125hypothetical protein B456_004G262900 [Gossypium raimondii]545006588 (3)gb|KJB26851.1|9e-80hypothetical protein B456_004G262900 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF032C22- GTACAG
                      ____________________________________________________________
consensus GTACAG
 
. : . : . : . : . : . :
rJMSF032C22- TAATGATCNCAATCTTGATCTCTNCTNCATAACGCTTCCTCTGCAATCTGAGTCGTTAAT
                      ____________________________________________________________
consensus TAATGATCNCAATCTTGATCTCTNCTNCATAACGCTTCCTCTGCAATCTGAGTCGTTAAT
 
. : . : . : . : . : . :
rJMSF032C22- GCAGTTTTCATTTCTTTGAGTTTCNCCNCAAAAATCTTCTTCTTGTAGNATTCTACCAAA
                      ____________________________________________________________
consensus GCAGTTTTCATTTCTTTGAGTTTCNCCNCAAAAATCTTCTTCTTGTAGNATTCTACCAAA
 
. : . : . : . : . : . :
rJMSF032C22- GGTAANAGGTCCTCCTTGGNGAAANGTTCNTAGAANGCTTCAGGTGNCCTCTTTGAAGAC
                      ____________________________________________________________
consensus GGTAANAGGTCCTCCTTGGNGAAANGTTCNTAGAANGCTTCAGGTGNCCTCTTTGAAGAC
 
. : . : . : . : . : . :
rJMSF032C22- GGGAAGAATTCAAGAAAATTGTCATCAACTTTACCCCGCTTAANAATTGATATCAGATCA
                      ____________________________________________________________
consensus GGGAAGAATTCAAGAAAATTGTCATCAACTTTACCCCGCTTAANAATTGATATCAGATCA
 
. : . : . : . : . : . :
rJMSF032C22- TCAAGACTGTTGTCNACCAAATATNCCTTGAAAAAGTCAGTGATGAANGANAGAACTAGC
JMSF032C22+ AAAAGTCAGTGATGAATGAGAGAACTAGC
                      ____________________________________________________________
consensus TCAAGACTGTTGTCNACCAAATATNCCTTGAAAAAGTCAGTGATGAATGAGAGAACTAGC
 
. : . : . : . : . : . :
rJMSF032C22- CCTTTGGCAACAAGGTTATCTTTGAGCAGTGGTTGGAACACAGTTTCTGGTGGGAGCCCT
JMSF032C22+ CCTTTGGCAACAAGGTTATCTTTGAGCAGTGGTTGGAACACAGTTTCTGGTGGGAGCCCT
                      ____________________________________________________________
consensus CCTTTGGCAACAAGGTTATCTTTGAGCAGTGGTTGGAACACAGTTTCTGGTGGGAGCCCT
 
. : . : . : . : . : . :
rJMSF032C22- GACAACTTCNGAGAAAATGCAAGGGCTGTAAAAATTGCNAGCTTCTTTCTTTCATTATCC
JMSF032C22+ GACAACTTCTGAGAAAATGCAAGGGCTGTAAAAATTGCGAGCTTCTTTCTTTCATTATCC
                      ____________________________________________________________
consensus GACAACTTCTGAGAAAATGCAAGGGCTGTAAAAATTGCGAGCTTCTTTCTTTCATTATCC
 
. : . : . : . : . : . :
rJMSF032C22- TCAAAGAGTTCCAATGNCTGTAAGAATCTTCGCNTAACATTTTCAAGATTCTTTATAAGA
JMFF001D06+ CGCATAACATTTTCAAGGTTCTTTATAAGA
JMSF032C22+ TCAAAGAGTTCCAATGACTGTAAGAATCTTCGCATAACATTTTCAAGATTCTTTATAAGA
                      ____________________________________________________________
consensus TCAAAGAGTTCCAATGACTGTAAGAATCTTCGCATAACATTTTCAAGATTCTTTATAAGA
 
. : . : . : . : . : . :
rJMSF032C22- ANTGGCTTTCTTCGTAGGATCNTCTGTATATAGATTACNGATGGAAGAATGGCTTC
JMFF001D06+ AATGGCTTTCGCCTTAAGATCTTTTGCACGTAGATTACAGATGGCAAAATGAATTCGCGC
JMSF032C22+ AATGGCTTTCTTCGTAGGATCTTCTGTATATAGATTACAGATGGAAGAATGGCTTCACGC
                      ____________________________________________________________
consensus AATGGCTTTCTTCGTAGGATCTTCTGTATATAGATTACAGATGGAAGAATGGCTTCGCGC
 
. : . : . : . : . : . :
JMFF001D06+ TCTGGCTGACACTCAATTACAGAGTAAGGGTGGCGCTCCCCCTCATCCGGTTTAACTGTT
JMSF032C22+ TTAGGTTCACACTCAATTACAGAATAAGGGTGGCGCTCCCCCTCATCAGGTTTGATTGTT
                      ____________________________________________________________
consensus TTTGGTTGACACTCAATTACAGAGTAAGGGTGGCGCTCCCCCTCATCCGGTTTGATTGTT
 
. : . : . : . : . : . :
JMFF001D06+ CCAGGTTGAGTACGACCTCCTGTGAATACAACCTCAAAAAAAGTGTCACCGTATCTAGAG
JMSF032C22+ CCAGGTTGTGTGCGGCCTCCTGTGAAAACAACCTCAAAAAAGGTATCACCGTATCTTGAG
                      ____________________________________________________________
consensus CCAGGTTGTGTGCGGCCTCCTGTGAATACAACCTCAAAAAAGGTGTCACCGTATCTTGAG
 
. : . : . : . : . : . :
JMFF001D06+ AAGTTAAGTTCTGATGACTCAATGCTCTTAGCAACGAGTTCCAGATCACCAGCATTATCC
JMSF032C22+ AAGTTAAGCTCTGAAGACTCGACGCTCTTAGCAACAAGTTCCAGATCACCAGCATTATCC
                      ____________________________________________________________
consensus AAGTTAAGTTCTGATGACTCGATGCTCTTAGCAACGAGTTCCAGATCACCAGCATTATCC
 
. : . : . : . : . : . :
JMFF001D06+ AAATAGATCTGGACCACTGCATCCGCAAATGCTGCAGGGTCCAGCGGCGCTGCAATATTC
JMSF032C22+ AGATATATCTGGATCACTACATCTGCAAATGCTGCAGGGTCCAGAGGCGCAGCAATATTC
                      ____________________________________________________________
consensus AGATATATCTGGATCACTGCATCTGCAAATGCTGCAGGGTCCAGCGGCGCTGCAATATTC
 
. : . : . : . : . : . :
JMFF001D06+ CGTTTGCGGGTCTTAATCCGCGTGCCACCTAGAGTGGGTTTCTCCTTCGAGCTCATAAAC
JMSF032C22+ CGTTTGCGGGTCTTAATCCGCGTGCCACCTAGAGTGGGTTTCTCCTTTGAGCTCATAAAC
                      ____________________________________________________________
consensus CGTTTGCGGGTCTTAATCCGCGTGCCACCTAGAGTGGGTTTCTCCTTTGAGCTCATAAAC
 
. : . : . : . : . : . :
JMFF001D06+ CAAGATCGAAAAGAATCGAAGTACAGGCAGAGACCCTCTGC
JMSF032C22+ CAAGATCGAGATGAATCGGTGTAGAGGCGGACACCCTCTGCTACGCTACTCGCGACGCAA
                      ____________________________________________________________
consensus CAAGATCGAGATGAATCGGTGTAGAGGCGGAGACCCTCTGCTACGCTACTCGCGACGCAA
 
. : . : . : . : . : . :
JMSF032C22+ AGTACGAAGAGGAGAGAAATGGGAAAGAAAAGGAAAAGAGAGAGAGAGATTGATTCCCCC
                      ____________________________________________________________
consensus AGTACGAAGAGGAGAGAAATGGGAAAGAAAAGGAAAAGAGAGAGAGAGATTGATTCCCCC