Contig 006556: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF044M20- CATTATCATAAAAAGTTTGAGTACAATCTCAGATCTCATTTGAAACT
rJMSF027M12- GTACAATCTCAGATCTCATTTGAAACT
rJMSF038J13- GTACAATCTCAGATCTCATTTGAAACT
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consensus CATTATCATAAAAAGTTTGAGTACAATCTCAGATCTCATTTGAAACT
. : . : . : . : . : . :
rJMSF044M20- ACCATTTTCAAAACATAATAATCTGGCCACATGATTTTTAGACCTGCTCTAATTTGTTCT
rJMSF027A11- TGCTCTAATTTGTTCT
rJMSF027M12- ACCATTTTCAAAACATAATAATCTGGCCACATGATTTTTAGACCTGCTCTAATTTGTTCT
rJMSF038J13- ACCATTTTCAAAACATAATAATCTGGCCACATGATTTTTAGACCTGCTCTAATTTGTTCT
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consensus ACCATTTTCAAAACATAATAATCTGGCCACATGATTTTTAGACCTGCTCTAATTTGTTCT
. : . : . : . : . : . :
rJMSF044M20- CTTCGAAATTTTATCCTCTACTTAAAGAGTTAAAGACACCTTCCTCCATATCCGGCATTC
rJMSF027A11- CGNCGAAATTTTATCCTCNACTTAAAGAGTTAAAGACACCTTCNTCNATATCCGGCATTC
rJMSF027M12- CTTCGAAATTTTATCCTCTACTTAAAGAGTTAAAGACACCTTCCTCCATATCCGGCATTC
rJMSF038J13- CTTCGAAATTTTATCCTCTACTTAAAGAGTTAAAGACACCTTCCTCCATATCCGGCATTC
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consensus CTTCGAAATTTTATCCTCTACTTAAAGAGTTAAAGACACCTTCCTCCATATCCGGCATTC
. : . : . : . : . : . :
rJMSF044M20- CTGAATAATGCCTGTTTTATGTCTTCTGTACTCAAAACTCCCCTTTGCTCCAATTCCTGA
rJMSF027A11- CTGAATAATGCCTGTTTTATGTCTTCTGTACTCAAAACTCCCCTTTGCTCCAATTCCTGA
rJMSF027M12- CTGAATAATGCCTGTTTTATGTCTTCTGTACTCAAAACTCCCCTTTGCTCCAATTCCTGA
rJMSF038J13- CTGAATAATGCCTGTTTTATGTCTTCTGTACTCAAAACTCCCCTTTGCTCCAATTCCTGA
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consensus CTGAATAATGCCTGTTTTATGTCTTCTGTACTCAAAACTCCCCTTTGCTCCAATTCCTGA
. : . : . : . : . : . :
rJMSF044M20- GTGCAGGAAGCTCTGAGTGCAAAGTCATTGAAACAACTAATAACACACTGTTGAATCTCT
rJMSF027A11- GTGCAGGAAGCTCTGAGTGCANAGTCATTGANACAACTNATAACAGACTGTTGAATCTCT
rJMSF027M12- GTGCAGGAAGCTCTGAGTGCAAAGTCATTGAAACAACTAATAACACACTGTTGAATCTCT
rJMSF038J13- GTGCAGGAAGCTCTGAGTGCAAAGTCATTGAAACAACTAATAACACACTGTTGAATCTCT
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consensus GTGCAGGAAGCTCTGAGTGCAAAGTCATTGAAACAACTAATAACACACTGTTGAATCTCT
. : . : . : . : . : . :
rJMSF044M20- AGGCCTAAAGCCTCTAGAGTGGTCACTGTTGATAGCAGAAGCCCAGGCTTGGCTGAGCAG
rJMSF027A11- AGGCCTAAAG
rJMSF027M12- AGGCCTAAAGCCTCTAGAGTGGTCACTGTTGATAGCAGAAGCCCAGGCTTGGCTGAGCAG
rJMSF038J13- AGGCCTAAAGCCTCTAGAGTGGTCACTGTTGATAGCAGAAGCCCAGGCTTGGCTGAGCAG
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consensus AGGCCTAAAGCCTCTAGAGTGGTCACTGTTGATAGCAGAAGCCCAGGCTTGGCTGAGCAG
. : . : . : . : . : . :
rJMSF044M20- CAAATCTCCACCCTTGTATCACTCACTTCTCTCCTTTCCACATCAAACTTGGGTGAATTC
rJMSF027M12- CAAATCTCCACCCTTGTATCACTCACTTCTCTCCTTTCCACATCAAACTTGGGTGAATTC
rJMSF038J13- CAAATCTCCACCCTTGTATCACTCACTTCTCTCCTTTCCACATCAAACTTGGGTGAATTC
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consensus CAAATCTCCACCCTTGTATCACTCACTTCTCTCCTTTCCACATCAAACTTGGGTGAATTC
. : . : . : . : . : . :
rJMSF044M20- CTGACAGACATTTCATCTGGTTTTACATCCTTGAAGATGCTCATTAGTCTGAGTTGATCT
rJMSF027M12- CTGACAGACATTTCATCTGGTTTTACATCCTTGAAGATGCTCATTAGTCTGAGTTGATCT
rJMSF038J13- CTGACAGACATTTCATCTGGTTTTACATCCTTGAAGATGCTCATTAGTCTGAGTTGATCT
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consensus CTGACAGACATTTCATCTGGTTTTACATCCTTGAAGATGCTCATTAGTCTGAGTTGATCT
. : . : . : . : . : . :
rJMSF044M20- GGCCCCACCTCCATTTCTTCTTGCAGATGGTTTATTCTCTCCAGCAGCTCCTTCATGTAG
rJMSF027M12- GGCCCCACCTCCATTTCTTCTTGCAGATGGTTTATTCTCTCCAGCAGCTCCTTCATGTAG
rJMSF038J13- GGCCCCACCTCCATTTCTTCTTGCAGATGGTTTATTCTCTCCAGCAGCTCCTTCATGTAG
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consensus GGCCCCACCTCCATTTCTTCTTGCAGATGGTTTATTCTCTCCAGCAGCTCCTTCATGTAG
. : . : . : . : . : . :
rJMSF044M20- TCTATTGTGTCCCCAAGAATGGATGTTCTATCCATCTTGCTAATCTTGGGCACAATTGAT
rJMSF027M12- TCTATTGTGTCCCCAAGAATGGATGTTCTATCCATCTTGCTAATCTTGGGCACAATTGAT
rJMSF038J13- TCTATTGTGTCCCCAAGAATGGATGTTCTATCCATCTTGCTAATCTTGGGCACAATTGAT
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consensus TCTATTGTGTCCCCAAGAATGGATGTTCTATCCATCTTGCTAATCTTGGGCACAATTGAT
. : . : . : . : . : . :
rJMSF044M20- CTAAGCATGGAGAGCCTGTCATTAAGCCTCTTCCTTCTCCTCCTCTCAGCCATGAGGTTC
rJMSF027M12- CTAAGCATGGAGAGCCTGTCATTAAGCCTCTTCCTTCTCCTCCTCTCAGCCATGAGGTTC
rJMSF038J13- CTAAGCATGGAGAGCCTGTCATTAAGCCTCTTCCTTCTCCTCCTCTCAGCCATGAGGTTC
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consensus CTAAGCATGGAGAGCCTGTCATTAAGCCTCTTCCTTCTCCTCCTCTCAGCCATGAGGTTC
. : . : . : . : . : . :
rJMSF044M20- TTGGAAGGTTGGCCATGGAGTTTCTTGGATTTGGGCTTCTTCTCAGGGCCAGATGACCCA
rJMSF027M12- TTGGAAGGTTGGCCATGGAGTTTCTTGGATTTGGGCTTCTTCTCAGGGCCAGATGACCCA
rJMSF038J13- TTGGAAGGTTGGCCATGGAGTTTCTTGGATTTGGGCTTCTTCTCAGGGCCAGATGACCCA
JMSF044M20+ TTTCTTGGATTTGGGCTTCTTNTCAGGGCCAGATGACCCA
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consensus TTGGAAGGTTGGCCATGGAGTTTCTTGGATTTGGGCTTCTTCTCAGGGCCAGATGACCCA
. : . : . : . : . : . :
rJMSF044M20- ATGTTGAAGGTCACACCAGGCTGCACAACCTCACAACCACCACCGNCGCCGCCGCCT
rJMSF027M12- ATGTTGAAGGTCACACCAGGCTGCACAACCTCACAACC
rJMSF038J13- ATGTTGAAGGTCACACCAGGCTGCACAACCTCACAACCACCACCGCCGCCGCCGCCTCCG
JMSF044M20+ ATGTTGAAGGTCACACCAGGNTGCACAACCTCACAACCACCACCGCCGCCGCCGCCTCCG
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consensus ATGTTGAAGGTCACACCAGGCTGCACAACCTCACAACCACCACCGCCGCCGCCGCCTCCG
. : . : . : . : . : . :
rJMSF038J13- CCGCCGTACTGGTAAACTGCAGGCTCCATTTTACACGAATGAGTATTATGGAAGCAATTA
JMFF045C24+ ACTGCAGGCTCCATTTTACACGAATGAGTATTATGGAAGCAATTA
JMSF044M20+ CCGCCGTANTGGTAAACTGCAGGCTCCATTTTACACGAATGAGTATTATGGAAGCAATTA
JMSF027M12+ TGGTAAACTGCAGGCTCCATTTTACACGAATGAGTATTATGGAAGCAATTA
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consensus CCGCCGTACTGGTAAACTGCAGGCTCCATTTTACACGAATGAGTATTATGGAAGCAATTA
. : . : . : . : . : . :
rJMSF038J13- TTAGCCTCCTCGTCAAAGATTCCGGCCGGCGATGACGACAAGAGCTCCTCGT
JMFF045C24+ TTAGCCTCCTCGTCAAAGATTCCGGCCGGCGATGACGACAAGAGCTCCTCGTGGTAGCTG
JMSF044M20+ TTAGCCTCCTCGTCAAAGATTCCGGCCGGCGATGACGACAAGAGCTCCTCGTGGTAGCTG
JMSF038J13+ CCTCCTCGTCAAAGATTCCGGCCGGCGATGACGACAAGAGCTCCTCGTGGTAGCTG
JMSF027M12+ TTAGCCTCCTCGTCAAAGATTCCGGCCGGCGATGACGACAAGAGCTCCTCGTGGTAGCTG
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consensus TTAGCCTCCTCGTCAAAGATTCCGGCCGGCGATGACGACAAGAGCTCCTCGTGGTAGCTG
. : . : . : . : . : . :
JMFF045C24+ GCCGGAAATGGCGGCGGGGTGCCGAGTTTGATGTTGGACGACTCAGTGAGTTGCGGGGAA
JMSF044M20+ GCCGGAAATGGCGGCGGGGTGCCGAGTTTGATGTTGGACGACTCAGTGAGTTGCGGGGAA
JMSF038J13+ GCCGGAAATGGCGGCGGGGTGCCGAGTTTGATGTTGGACGACTCAGTGAGTTGCGGGGAA
JMSF027M12+ GCCGGAAATGGCGGCGGGGTGCCGAGTTTGATGTTGGACGACTCAGTGAGTTGCGGGGAA
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consensus GCCGGAAATGGCGGCGGGGTGCCGAGTTTGATGTTGGACGACTCAGTGAGTTGCGGGGAA
. : . : . : . : . : . :
JMFF045C24+ AGCTCAGTGTAGAGGTCATTGAAGAAGCAGGAAGAAGAGGAGTTGAAGCTCTGCTCAAAT
JMSF044M20+ AGCTCAGTGTAGAGGTCATTGAAGAAGCAGGAAGAAGAGGAGTTGAAGCTCTGCTCAAAT
JMSF038J13+ AGCTCAGTGTAGAGGTCATTGAAGAAGCAGGAAGAAGAGGAGTTGAAGCTCTGCTCAAAT
JMSF027M12+ AGCTCAGTGTAGAGGTCATTGAAGAAGCAGGAAGAAGAGGAGTTGAAGCTCTGCTCAAAT
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consensus AGCTCAGTGTAGAGGTCATTGAAGAAGCAGGAAGAAGAGGAGTTGAAGCTCTGCTCAAAT
. : . : . : . : . : . :
JMFF045C24+ GGCAGATAATTGGCGTAGCAGTCGTCAAAAGAGGCGGTGGTGGCCGTGCTGGTGGCGGTG
JMSF044M20+ GGCAGATAATTGGCGTAGCAGTCGTCAAAAGAAGCGGTGGTGGCCGTGCTGGTGGCGGTG
JMSF038J13+ GGCAGATAATTGGCGTAGCAGTCGTCAAAAGAAGCGGTGGTGGCCGTGCTGGTGGCGGTG
JMSF027M12+ GGCAGATAATTGGCGTAGCAGTCGTCAAAAGAAGCGGTGGTGGCCGTGCTGGTGGCGGTG
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consensus GGCAGATAATTGGCGTAGCAGTCGTCAAAAGAAGCGGTGGTGGCCGTGCTGGTGGCGGTG
. : . : . : . : . : . :
JMFF045C24+ GTCGCCGCCGTCGTGGTGGCGGCGCTGCAACATCCGCCGCCGGGAATTATTGGCACCATC
JMSF044M20+ GTCGCCGCCGTCGTGGTGGCGGCGCTGCAACACCCGCCGCCGGGAATTATTGGCACCATC
JMSF027A11+ TGGTGGCGGCGCTGCAACACCCGCCGCCGGGAANTATTGGCACCATC
JMSF038J13+ GTCGCCGCCGTCGTGGTGGCGGCGCTGCAACACCCGCCGCCGGGAATTATTGGCACCATC
JMSF027M12+ GTCGCCGCCGTCGTGGTGGCGGCGCTGCAACACCCGCCGCCGGGAATTATTGGCACCATC
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consensus GTCGCCGCCGTCGTGGTGGCGGCGCTGCAACACCCGCCGCCGGGAATTATTGGCACCATC
. : . : . : . : . : . :
JMFF045C24+ ATCTGCTTCTCATCCTCAACACAATCAAAACCCCCATTCCCATTAACAACATTATTATTG
JMSF044M20+ ATCTGCTTCTCATCCTCAACACAATCAAAACCCCCATTCCCATTAACAACATTATTATTG
JMSF027A11+ ATGTGCTTCTCATCCTCAACACAATCAAAACCCCCATTCCCATTAACAACATTATTATTG
JMSF038J13+ ATNTGCTTCTCATCCTCAACACAATCAAAACCCCCATTCCCATTAACAACATTATTATTG
JMSF027M12+ ATCTGCTTCTCATCCTCAACACAATCAAAACCCCCATTCCCATTAACAACATTATTATTG
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consensus ATCTGCTTCTCATCCTCAACACAATCAAAACCCCCATTCCCATTAACAACATTATTATTG
. : . : . : . : . : . :
JMFF045C24+ GAATAATAATTATTGTAACAATAGAAATCATCAATATTATTCCTGTTCATTCCCATTCCC
JMSF044M20+ GAATAATAATTATTGTAACAATAGAAATCATCAATATTATTCCTGTTCATTCCCATTCCC
JMSF027A11+ GAATAATAATTATTGTAACAATAGAAATCATCAATATTATTCCNGTTCATTCCCATTCCC
JMSF038J13+ GAATAATAATTATTGTAACAATAGAAATCATCAATATTATTCCTGTTCATTCCCATTCCC
JMSF027M12+ GAATAATAATTATTGTAACAATAGAAATCATCAATATTATTCCTGTTCATTCCCATTCCC
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consensus GAATAATAATTATTGTAACAATAGAAATCATCAATATTATTCCTGTTCATTCCCATTCCC
. : . : . : . : . : . :
JMFF045C24+ ATTCCCACAGGAATAATATCACCTGCTTCCCATGAATCACTTCTCAAAGCTAACAATTCT
JMSF044M20+ ATTCCCACAGGAATAATATCACCTGCTTCCCATGAATCACTTCTCAAAGCTAACAATTCT
JMSF027A11+ ATTCCCACAGGAATAATATCNCNNGCTTCCCANGAATCACTTNTCAAAGCTAACAATTCT
JMSF038J13+ ATTCCCACAGGAATAATATCACCTGCTTCCCATGAATCACTTCTCAAAGCTAACAATTCT
JMSF027M12+ ATTCCCACAGGAATAATATCACCTGCTTCCCATGAATCACTTCTCAAAG-TAACAATTCT
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consensus ATTCCCACAGGAATAATATCACCTGCTTCCCATGAATCACTTCTCAAAGCTAACAATTCT
. : . : . : . : . : . :
JMFF045C24+ TCCAAGAAACCATTCTCATAGTACTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTC
JMSF044M20+ TCCAAGAAACCATTCTCATAGTACTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTC
JMSF027A11+ TCCAAGAAACCATTCTCATAGTACTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTC
JMSF038J13+ TCCAAGAAACCATTCTCATAGTACTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTC
JMSF027M12+ TCCAAGAAACCATTCTCATAGTACTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTC
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consensus TCCAAGAAACCATTCTCATAGTACTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTC
. : . : . : . : . : . :
JMFF045C24+ TCTCCTATGTTTTCTTTAAAAAG
JMSF044M20+ TCTCCTATGTTTTCTTTAAAAAGGTTGATAAAAATGAGGTTTGATGGGAATGAGGT
JMSF027A11+ TNTCCTATGTTTTCTTTAAAAAGGTTGATAAAAATGAGGTTTGATGGGAATGAGGT
JMSF038J13+ TCTCCTATGTTTTCTTTAAAAAGGTTGATAAAAATGAGGTTTGATGGGAATGAGGT
JMSF027M12+ TCTCCTATGTTTTCTTTAAAAAGGTTGATAAAAATGAGGTTTGATGGGAATGAGGTTGCC
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consensus TCTCCTATGTTTTCTTTAAAAAGGTTGATAAAAATGAGGTTTGATGGGAATGAGGTTGCC