Contig 006552: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF027E17+ GAGGCATA
rJMSF026E17+ GAGGCATA
JMSF026E17- GAGGCATA
JMSF027E17- GAGGCATA
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consensus GAGGCATA
. : . : . : . : . : . :
rJMSF027E17+ TATGCAATTCTTCAGTACAAGTAATTGTTCACATTCTTGTCTTGTTCATACAGGTTTTGG
rJMSF026E17+ TATGCAATTCTTCAGTACAAGTAATTGTTCACATTCTTGTCTTGTTCATACAGGTTTTGG
JMSF026E17- TATGCAATTCTTCAGTACAAGTAATTGTTCACATTCTTGTCTTGTTCATACAGGTTTTGG
JMSF027E17- TATGCAATTCTTCAGTACAAGTAATTGTTCACATTCTTGTCTTGTTCATACAGGTTTTGG
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consensus TATGCAATTCTTCAGTACAAGTAATTGTTCACATTCTTGTCTTGTTCATACAGGTTTTGG
. : . : . : . : . : . :
rJMSF027E17+ AGCAGAAAATAATGGCTACGGCAGCAGCATCAGCCTCGGCTACCCTTTCACCCGCGGCGA
rJMSF026E17+ AGCAGAAAATAATGGCTACGGCAGCAGCATCAGCCTCGGCTACCCTTTCACCCGCGGCGA
JMSF026E17- AGCAGAAAATAATGGCTACGGCAGCAGCATCAGCCTCGGCTACCCTTTCACCCGCGGCGA
JMSF027E17- AGCAGAAAATAATGGCTACGGCAGCAGCATCAGCCTCGGCTACCCTTTCACCCGCGGCGA
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consensus AGCAGAAAATAATGGCTACGGCAGCAGCATCAGCCTCGGCTACCCTTTCACCCGCGGCGA
. : . : . : . : . : . :
rJMSF027E17+ TGGTTGTCGCCGCAAAGACCAACAGGTTTTCCCAGAGAAGAAGCACCAAAGTGAGGTACA
rJMSF026E17+ TGGTTGTCGCCGCAAAGACCAACAGGTTTTCCCAGAGAAGAAGCACCAAAGTGAGGTACA
JMSF026E17- TGGTTGTCGCCGCAAAGACCAACAGGTTTTCCCAGAGAAGAAGCACCAAAGTGAGGTACA
JMSF027E17- TGGTTGTCGCCGCAAAGACCAACAGGTTTTCCCAGAGAAGAAGCACCAAAGTGAGGTACA
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consensus TGGTTGTCGCCGCAAAGACCAACAGGTTTTCCCAGAGAAGAAGCACCAAAGTGAGGTACA
. : . : . : . : . : . :
rJMSF027E17+ TTAGAGGGCTGAATTCATTTGAAGGCCTCAAGGCGCATAACCATGTTGCCGCATTAGGCG
rJMSF026E17+ TTAGAGGGCTGAATTCATTTGAAGGCCTCAAGGCGCATAACCATGTTGCCGCATTAGGCG
JMSF026E17- TTAGAGGGCTGAATTCATTTGAAGGCCTCAAGGCGCATAACCATGTTGCCGCATTAGGCG
JMSF027E17- TTAGAGGGCTGAATTCATTTGAAGGCCTCAAGGCGCATAACCATGTTGCCGCATTAGGCG
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consensus TTAGAGGGCTGAATTCATTTGAAGGCCTCAAGGCGCATAACCATGTTGCCGCATTAGGCG
. : . : . : . : . : . :
rJMSF027E17+ TCCCTGTTTGCGCTGACCACTCGTTTGCAAAGATTGTAAGCTCACTGAGACCACGAGGCA
rJMSF026E17+ TCCCTGTTTGCGCTGACCACTCGTTTGCAAAGATTGTAAGCTCACTGAGACCACGAGGCA
JMSF026E17- TCCCTGTTTGCGCTGACCACTCGTTTGCAAAGATTGTAAGCTCACTGAGACCACGAGGCA
JMSF027E17- TCCCTGTTTGCGCTGACCACTCGTTTGCAAAGATTGTAAGCTCACTGAGACCACGAGGCA
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consensus TCCCTGTTTGCGCTGACCACTCGTTTGCAAAGATTGTAAGCTCACTGAGACCACGAGGCA
. : . : . : . : . : . :
rJMSF027E17+ AGGGTAATGGCGGTGGAGCTCTCTCTGCAAGCTGCAATGCCATCGCCGAGATTTTCAGGA
rJMSF026E17+ AGGGTAATGGCGGTGGAGCTCTCTCTGCAAGCTGCAATGCCATCGCCGAGATTTTCAGGA
JMSF026E17- AGGGTAATGGCGGTGGAGCTCTCTCTGCAAGCTGCAATGCCATCGCCGAGATTTTCAGGA
JMSF027E17- AGGGTAATGGCGGTGGAGCTCTCTCTGCAAGCTGCAATGCCATCGCCGAGATTTTCAGGA
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consensus AGGGTAATGGCGGTGGAGCTCTCTCTGCAAGCTGCAATGCCATCGCCGAGATTTTCAGGA
. : . : . : . : . : . :
rJMSF027E17+ TTGCTGCCATAATCCCTGGCCTTGTTCTTGTTGGAGTCGCTGTCGGTTTCGTCCTCCTCC
rJMSF026E17+ TTGCTGCCATAATCCCTGGCCTTGTTCTTGTTGGAGTCGCTGTCGGTTTCGTCCTCCTCC
JMSF026E17- TTGCTGCCATAATCCCTGGCCTTGTTCTTGTTGGAGTCGCTGTCGGTTTCGTCCTCCTCC
JMSF027E17- TTGCTGCCATAATCCCTGGCCTTGTTCTTGTTGGAGTCGCTGTCGGTTTCGTCCTCCTCC
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consensus TTGCTGCCATAATCCCTGGCCTTGTTCTTGTTGGAGTCGCTGTCGGTTTCGTCCTCCTCC
. : . : . : . : . : . :
rJMSF027E17+ GAGTTGAAGCTTACCTGGAGGAATCTGAAGAATGAAGTTATGGCAAGTCTGGTGGTTGGT
rJMSF026E17+ GAGTTGAAGCTTACCTGGAGGAATCTGAAGAATGAAGTTATGGCAAGTCTGGTGGTTGGT
JMSF026E17- GAGTTGAAGCTTACCTGGAGGAATCTGAAGAATGAAGTTATGGCAAGTCTGGTGGTTGGT
JMSF027E17- GAGTTGAAGCTTACCTGGAGGAATCTGAAGAATGAAGTTATGGCAAGTCTGGTGGTTGGT
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consensus GAGTTGAAGCTTACCTGGAGGAATCTGAAGAATGAAGTTATGGCAAGTCTGGTGGTTGGT
. : . : . : . : . : . :
rJMSF027E17+ TCAGAGTTCTTTTTCAATAATCAAGGT
rJMSF026E17+ TCAGAGTTCTTTTTCAATAATCAAGGTCAATGTGCTTTTGAATTGGTTCCATGTTTTGTC
JMSF026E17- TCAGAGTTCTTTTTCAATAATCAAGGTCAATGTGCTTTTGAATTGGTTCCATGTTTTGTC
JMSF027E17- TCAGAGTTCTTTTTCAATAATCAAGGTCAATGTGCTTTTGAATTGGTTCCATGTTTTGTC
____________________________________________________________
consensus TCAGAGTTCTTTTTCAATAATCAAGGTCAATGTGCTTTTGAATTGGTTCCATGTTTTGTC
. : . : . : . : . : . :
rJMSF026E17+ TTGTATATT
JMSF026E17- TTGTATATTTGTTCTGTTGGGGCAACATATATATAACTAAGATATCTTTGCCTCTCTTT
JMSF027E17- TTGTATATTTGTTCTGTTGGGGCAACATATATATAACTAAGATATCTTTGCCTCTCTTTC
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consensus TTGTATATTTGTTCTGTTGGGGCAACATATATATAACTAAGATATCTTTGCCTCTCTTTC