Contig 006545:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021C15Sequence654006545 (3)772022529
JMSF025M17Sequence689006545 (3)793012635 (3)
JMSF034E14Sequence686006545 (3)777004268 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021C15+ TCTCTATGTAATTGATAACA
                      ____________________________________________________________
consensus TCTCTATGTAATTGATAACA
 
. : . : . : . : . : . :
JMSF021C15+ TAAATAATTAAGCACACTTTAGTGTCTTCCAAGACAAACTCATGTAACTGCTCTATAAAT
JMSF034E14+ AGACAAACCCATGTAACTGCTCTATAAAT
JMSF025M17+ AGACAAACCCANGTAACTGCTCTATAAAT
                      ____________________________________________________________
consensus TAAATAATTAAGCACACTTTAGTGTCTTCCAAGACAAACCCATGTAACTGCTCTATAAAT
 
. : . : . : . : . : . :
JMSF021C15+ ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATATAATAAACTCAAA
JMSF034E14+ ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATATAATAAACTCAAA
JMSF025M17+ ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATACAATAAACTCAAA
                      ____________________________________________________________
consensus ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATATAATAAACTCAAA
 
. : . : . : . : . : . :
JMSF021C15+ TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
JMSF034E14+ TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
JMSF025M17+ TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
                      ____________________________________________________________
consensus TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
 
. : . : . : . : . : . :
JMSF021C15+ CATGCGCGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAAGGTATTTCTTCAAGAA
JMSF034E14+ CATGCACGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAAGGTATTTCTTCAAGAA
JMSF025M17+ CATGCACGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAATGTATTTCTTCAAGAA
                      ____________________________________________________________
consensus CATGCACGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAAGGTATTTCTTCAAGAA
 
. : . : . : . : . : . :
JMSF021C15+ ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
JMSF034E14+ ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
JMSF025M17+ ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
                      ____________________________________________________________
consensus ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
 
. : . : . : . : . : . :
JMSF021C15+ TCATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
JMSF034E14+ TAATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
JMSF025M17+ TAATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
                      ____________________________________________________________
consensus TAATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
 
. : . : . : . : . : . :
JMSF021C15+ AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAGAT
JMSF034E14+ AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAG---ATA
JMSF025M17+ AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAGATCATA
                      ____________________________________________________________
consensus AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAGATCATA
 
. : . : . : . : . : . :
JMSF034E14+ TAAATCTGAAAACTATGGGAAATCCGAAGCTATTGTAGCTAAAAGCGACGATTTCCACGA
JMSF025M17+ TAAATCTGAAAACTATGGGAAATCCGAAGCTATTGTAGCTAAAAGCGGCGATTTCCACGA
                      ____________________________________________________________
consensus TAAATCTGAAAACTATGGGAAATCCGAAGCTATTGTAGCTAAAAGCGGCGATTTCCACGA
 
. : . : . : . : . : . :
JMSF034E14+ ATTCAATTCTTACACTCAGATTCCCACATTCCAGCCGCAGCTGTAAGCTTTCTATCGCGA
JMSF025M17+ ATTCAATTCTTACACTCAAATTCCCACATTCCAGCCGCAGCTGTAAGCTTTCTATCGCGA
                      ____________________________________________________________
consensus ATTCAATTCTTACACTCAGATTCCCACATTCCAGCCGCAGCTGTAAGCTTTCTATCGCGA
 
. : . : . : . : . : . :
JMSF034E14+ CACAGCGGCAGGGTTTCTTCATCGTGAATATGTTAGAGAGATAGAAATTGCGTGAAAATG
JMSF025M17+ CACAGCGGCAGGGTTTCTTCATCGTGAATATGTTAGAGAGATAGAAATTGCGTGAAAATG
                      ____________________________________________________________
consensus CACAGCGGCAGGGTTTCTTCATCGTGAATATGTTAGAGAGATAGAAATTGCGTGAAAATG
 
. : . : . : . : . : . :
JMSF034E14+ GCGAACGGTGGCATAGATCACACCCTCTAATTTTGTAGGAGATAAGGCCAACACATGAAT
JMSF025M17+ GCGAACGGTGGCATAGATCACACCCTCTAATTTTGTAGGAGATAAGGTCAACACATGAAT
                      ____________________________________________________________
consensus GCGAACGGTGGCATAGATCACACCCTCTAATTTTGTAGGAGATAAGGTCAACACATGAAT
 
. : . : . : . : . : . :
JMSF034E14+ TGTGCTAAACCAAGGCTTCCCGGTGTGTATGTATCGTACAATAGAAATGGAAAGCT
JMSF025M17+ TGTGCTAAACCAAGGCTTCCCGGTGTGTATGTATCGTACAATAGAAATGGAAAGCTAACC
                      ____________________________________________________________
consensus TGTGCTAAACCAAGGCTTCCCGGTGTGTATGTATCGTACAATAGAAATGGAAAGCTAACC