| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN033F02 | Sequence | 506 | 006537 (8) | ref|XP_009612679.1| | 1e-41 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana tomentosiformis] | |||||
| JMFN036B21 | Sequence | 619 | 006537 (8) | ref|XP_009780609.1| | 5e-41 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana sylvestris] | |||||
| JMFN040N06 | Sequence | 488 | 006537 (8) | ref|XP_009612679.1| | 1e-41 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana tomentosiformis] | |||||
| JMFN044B22 | Sequence | 619 | 006537 (8) | ref|XP_009612679.1| | 5e-35 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana tomentosiformis] | |||||
| JMSF018N01 | Sequence | 267 | 006537 (8) | ref|XP_009781865.1| | 100 | PREDICTED: uncharacterized protein LOC104230699 [Nicotiana sylvestris] | 663 | 006537 (8) | ref|XP_009780609.1| | 8e-41 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana sylvestris] |
| JMSF024P01 | Sequence | 697 | 006537 (8) | ref|XP_009780609.1| | 1e-40 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana sylvestris] | 663 | 006537 (8) | ref|XP_009780609.1| | 8e-41 | PREDICTED: heat shock factor-binding protein 1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFN044B22+ TTTCCAACTGAACAAAAAAAGTTTN
JMSF024P01+ TTTGGTAAAATATTTTCCAACTGAACAAAAAAAGTTTT
____________________________________________________________
consensus TTTGGTAAAATATTTTCCAACTGAACAAAAAAAGTTTT
. : . : . : . : . : . :
JMFN036B21+ CAGCAGCCACT-GCCACATAAAGTTTATATCAACATGGCA
rJMSF018N01- AATTGATCTGCCGACACAGCAGCCACT-GCCACATAAAGTTTATATCAACATGGCA
rJMSF024P01- AATTGATCTGCCGACACAGCAGCCACTGGCCACATAAAGTTTATATCAACATGGCA
JMFN044B22+ AACAAATTGATCTGCCGACACAGCAGCCACT-GCCACATAAAGTTTATATCAACATGGCA
JMSF024P01+ AACAAATTGATCTGCCGACACAGCAGCCACT-GCCACATAAAGTTTATATCAACATGGCA
____________________________________________________________
consensus AACAAATTGATCTGCCGACACAGCAGCCACT-GCCACATAAAGTTTATATCAACATGGCA
. : . : . : . : . : . :
JMFN033F02+ CAGAAACTCTTACGACGTGACATTGTAGGA
JMFN040N06+ AACTCTTACGACGTGACATTGTAGGA
JMFN036B21+ CAACCAAACACAACCAACATGATAAGAAAGCAGAAACTCTTACGACGTGACATTGTAGGA
rJMSF018N01- CAACCAAACACAACCAACATGATAAGAAAGCAGAAACTCTTACGACGTGACATTGTAGGA
rJMSF024P01- CAACCAAACACAACCAACATGATAAGAAAGCAGAAACTCTTACGACGTGACATTGTAGGA
JMFN044B22+ CAACCAAACACAACCAACATGATAAGAAAGCAGAAACTCTTACGACGTGACATTGTAGGA
JMSF024P01+ CAACCAAACACAACCAACATGATAAGAAAGCAGAAACTCTTACGACGTGACATTGTAGGA
____________________________________________________________
consensus CAACCAAACACAACCAACATGATAAGAAAGCAGAAACTCTTACGACGTGACATTGTAGGA
. : . : . : . : . : . :
JMFN033F02+ TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGGCT
JMFN040N06+ TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
JMFN036B21+ TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
rJMSF018N01- TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
rJMSF024P01- TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
JMFN044B22+ TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
JMSF024P01+ TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
____________________________________________________________
consensus TTTGTAGGGAAAATGATAGTCAAATCAACAAGTTCAAGTCACTCCAGAATTTTTCGGACT
. : . : . : . : . : . :
JMFN033F02+ GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
JMFN040N06+ GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
JMFN036B21+ GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
rJMSF018N01- GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
rJMSF024P01- GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
JMFN044B22+ GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
JMSF024P01+ GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
____________________________________________________________
consensus GAATAAGGTGTGTGAGTGATGCTCTCAAGTAGATACAGTTAGAGATGATGAAAATATACT
. : . : . : . : . : . :
JMFN033F02+ CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
JMFN040N06+ CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
JMFN036B21+ CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
rJMSF018N01- CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
rJMSF024P01- CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
JMFN044B22+ CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
JMSF024P01+ CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
____________________________________________________________
consensus CAAGTAAATCATACTGAAAATATAGATTTTGCACCTAATTTTAGGCAGAATCGGTGCCTG
. : . : . : . : . : . :
JMFN033F02+ AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
JMFN040N06+ AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
JMFN036B21+ AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
rJMSF018N01- AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
rJMSF024P01- AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
JMFN044B22+ AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTG-AGGCGATGGAGCATCTTGAC
JMSF024P01+ AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
____________________________________________________________
consensus AGCCTGACTTGGGTTCATCTCTTGTCTTCATCCCTGCTGAAGGCGATGGAGCATCTTGAC
. : . : . : . : . : . :
JMFN033F02+ CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
JMFN040N06+ CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
JMFN036B21+ CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
rJMSF018N01- CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
rJMSF024P01- CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
JMFN044B22+ CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
JMSF018N01+ TCTAATTCATCAACCCGGTTGCCCATCT
JMSF024P01+ CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
____________________________________________________________
consensus CCATTTCTGCCCTAAGATCATTGATGCTCTGCTCTAATTCATCAACCCGGTTGCCCATCT
. : . : . : . : . : . :
JMFN033F02+ CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
JMFN040N06+ CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
JMFN036B21+ CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
rJMSF018N01- CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
rJMSF024P01- CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
JMFN044B22+ CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
JMSF018N01+ CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
JMSF024P01+ CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
____________________________________________________________
consensus CATCAATTTTTGAAATGATAGATTCAGACATGGCCTGAAACCTTGTTTGCATTTGCTGAA
. : . : . : . : . : . :
JMFN033F02+ GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
JMFN040N06+ GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
JMFN036B21+ GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
rJMSF018N01- GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
rJMSF024P01- GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
JMFN044B22+ GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
JMSF018N01+ GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
JMSF024P01+ GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
____________________________________________________________
consensus GAAGATTTTGCACAAACACAGTCATATCTCCAGTGCTTTGTTTTGAACCATCTGCATCAT
. : . : . : . : . : . :
JMFN033F02+ GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGG
JMFN040N06+ GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTC
JMFN036B21+ GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGGTATT
rJMSF018N01- GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGGTATT
rJMSF024P01- GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGGTATT
JMFN044B22+ GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGG
JMSF018N01+ GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGGTATT
JMSF024P01+ GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGGTATT
____________________________________________________________
consensus GCCCATCCATTTCTGAGCGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGCCGGTATT
. : . : . : . : . : . :
JMFN036B21+ GGCTCGCAACTCAAAATGAGAACGAGGCTGCTCGCTTCGC
rJMSF018N01- GGCTCGCAACTCAAAATGAGAACGAGGCTGCTCGCTTCGCTTCTGACTTGAGCGCTCTC
rJMSF024P01- GGCTCGCAACTCAAAATGAGAACGAGGCTGCTCGCTTCGCTTCTGACTTGAGCGCTCTC
JMSF018N01+ GGCTCGCAACTCAAAATGAGAACGAGGCTGCTCGCTTCGCTTCTGACTTGAGCGCTCTC
JMSF024P01+ GGCTCGCAACTCAAAATGAGAACGAGGCTGCTCGCTTCGCTTCTGACTTGAGCGCTCTCC
____________________________________________________________
consensus GGCTCGCAACTCAAAATGAGAACGAGGCTGCTCGCTTCGCTTCTGACTTGAGCGCTCTCC