Contig 006536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS160H04Sequence554006536 (2)ref|XP_011022766.1|3e-51PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Populus euphratica]
JMSF024N22Sequence659006536 (2)ref|XP_011022766.1|3e-63PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Populus euphratica]803011253 (3)ref|XP_006355366.1|3e-134PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF024N22+ TTCTTAGNTCCCAGATTGAGAACAGAGCCTCCCCAGAGACTGTACTGAACACCCATTTT
                      ____________________________________________________________
consensus TTCTTAGNTCCCAGATTGAGAACAGAGCCTCCCCAGAGACTGTACTGAACACCCATTTT
 
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JMFS160H04+ GATGGCAAGAGATACGTCAACGGCCCCAACAGCCTCCACAATAGCGAAATACTTACTAGG
JMSF024N22+ GATGGCAAGAGATACGTCAACGGCCCCAACAGCCTCCACAATAGCGAAATACTTACTAGG
                      ____________________________________________________________
consensus GATGGCAAGAGATACGTCAACGGCCCCAACAGCCTCCACAATAGCGAAATACTTACTAGG
 
. : . : . : . : . : . :
JMFS160H04+ CTCCTCCACCACGTACCTGAGCGGCCTTACCCCGGCCTCCCGGACCAGACCAGAGAGCTG
JMSF024N22+ CTCCTCCACCACGTACCTGAGCGGCCTTACCCCGGCCTCCCGGACCAGACCAGAGAGCTG
                      ____________________________________________________________
consensus CTCCTCCACCACGTACCTGAGCGGCCTTACCCCGGCCTCCCGGACCAGACCAGAGAGCTG
 
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JMFS160H04+ TCTCATGCACAATTCCCGGTGCTCATCCTTCAGAATATCCAGCGGCGTCTGCAGGCCCGG
JMSF024N22+ TCTCATGCACAATTCCCGGTGCTCATCCTTCAGAATATCCAGCGGCGTCTGCAGGCCCGG
                      ____________________________________________________________
consensus TCTCATGCACAATTCCCGGTGCTCATCCTTCAGAATATCCAGCGGCGTCTGCAGGCCCGG
 
. : . : . : . : . : . :
JMFS160H04+ CCTGGAGCTGAAGTACTCGTACACCTTCTCCTGCAACTCCCTGTGCTCCCCCCTCAGGTA
JMSF024N22+ CCTGGAGCTGAAGTACTCGTACACCTTCTCCTGCAACTCCCTGTGCTCCCCCCTCAGGTA
                      ____________________________________________________________
consensus CCTGGAGCTGAAGTACTCGTACACCTTCTCCTGCAACTCCCTGTGCTCCCCCCTCAGGTA
 
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JMFS160H04+ CACCGACAACTCCTTGGTATTCACCGTCAGAACCTTCGCCCTAGCGGCACACGTCAGCAT
JMSF024N22+ CACCGACAACTCCTTGGTATTCACCGTCAGAACCTTCGCCCTAGCGGCACACGTCAGCAT
                      ____________________________________________________________
consensus CACCGACAACTCCTTGGTATTCACCGTCAGAACCTTCGCCCTAGCGGCACACGTCAGCAT
 
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JMFS160H04+ CTCCAGGCGGCTGTCCGCGGAGTTGTCCAGGAACGTCGCCGGCGTGAGGTGCATTGACAG
JMSF024N22+ CTCCAGGCGGCTGTCCGCGGAGTTGTCCAGGAACGTCGCCGGCGTGAGGTGCATTGACAG
                      ____________________________________________________________
consensus CTCCAGGCGGCTGTCCGCGGAGTTGTCCAGGAACGTCGCCGGCGTGAGGTGCATTGACAG
 
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JMFS160H04+ CCGTCGGATGCGGCGGTTAATCAGTTGCGTCTCCTCCCGATTTTCGTCCTCCGCCGTGCG
JMSF024N22+ CCGTCGGATGCGGCGGTTAATCAGTTGCGTCTCCTCCCGATTTTCGCCCTCCGCCGTGCG
                      ____________________________________________________________
consensus CCGTCGGATGCGGCGGTTAATCAGTTGCGTCTCCTCCCGATTTTCGTCCTCCGCCGTGCG
 
. : . : . : . : . : . :
JMFS160H04+ ATTCAGACGTTGCGACGTCATCTTCCGATGATCCATAGCAGCGCTATGCATCTACCGAAC
JMSF024N22+ ATTCAGACGTTGCGACGTCATCTTCCGATGATCCATAGCAGCGCTATGCATCTACCGAAC
                      ____________________________________________________________
consensus ATTCAGACGTTGCGACGTCATCTTCCGATGATCCATAGCAGCGCTATGCATCTACCGAAC
 
. : . : . : . : . : . :
JMFS160H04+ AGAGTGGTGTGTACGGAATTATTGTACGGTTCCGCAGAGAGAAGTAGAGAAGCGATCGGA
JMSF024N22+ AGAGTGGTGTGTACGGAATTATTGTACGGTTCCGCAGAGAGAAGTAGAGAAGCGATCGGA
                      ____________________________________________________________
consensus AGAGTGGTGTGTACGGAATTATTGTACGGTTCCGCAGAGAGAAGTAGAGAAGCGATCGGA
 
. : . : . : . : . : . :
JMFS160H04+ GAAGAAGGAAGTGA
JMSF024N22+ GAAGAAGGAAGTGACTTTTACGGCAAATTAAATTGGATTAGTTGAAATGGAGAGATTAGA
                      ____________________________________________________________
consensus GAAGAAGGAAGTGACTTTTACGGCAAATTAAATTGGATTAGTTGAAATGGAGAGATTAGA