Contig 006529:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF024G18+                                              GAAACTGCATTCTCTCTTCTCTAT
JMSF024G18-                                               GAAACTGCATTCTCTCTTCTCTAT
                      ____________________________________________________________
consensus                                                 GAAACTGCATTCTCTCTTCTCTAT
 
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rJMSF024G18+          CTTCCCAACTAACAATGGCGGCGACTGTGGTGCCTGCTGGAGAGAGCTGGTGCATGAACG
JMSF024G18-           CTTCCCAACTAACAATGGCGGCGACTGTGGTGCCTGCTGGAGAGAGCTGGTGCATGAACG
                      ____________________________________________________________
consensus             CTTCCCAACTAACAATGGCGGCGACTGTGGTGCCTGCTGGAGAGAGCTGGTGCATGAACG
 
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rJMSF024G18+          GCGGCTACGATGACTCCGGCAACCTCGACTTCTCCCAGGTCGACGCCGCACTTCTCATGT
JMSF024G18-           GCGGCTACGATGACTCCGGCAACCTCGACTTCTCCCAGGTCGACGCCGCACTTCTCATGT
                      ____________________________________________________________
consensus             GCGGCTACGATGACTCCGGCAACCTCGACTTCTCCCAGGTCGACGCCGCACTTCTCATGT
 
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rJMSF024G18+          CATTACTCGACGACACACAGGCGGCGGCTGTGGAGGATTACGACGACGAAAGATTGATGG
JMSF024G18-           CATTACTCGACGACACACAGGCGGCGGCTGTGGAGGATTACGACGACGAAAGATTGATGG
                      ____________________________________________________________
consensus             CATTACTCGACGACACACAGGCGGCGGCTGTGGAGGATTACGACGACGAAAGATTGATGG
 
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rJMSF024G18+          GTGTGATCCAGTCTTTGGAAGCTGAGATCGGCGTGGGGGGTGGCCACTCTAAGACCTGTC
JMSF024G18-           GTGTGATCCAGTCTTTGGAAGCTGAGATCGGCGTGGGGGGTGGCCACTCTAAGACCTGTC
                      ____________________________________________________________
consensus             GTGTGATCCAGTCTTTGGAAGCTGAGATCGGCGTGGGGGGTGGCCACTCTAAGACCTGTC
 
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rJMSF024G18+          AGCCGTCCGATGCCGGCCAACTTGACGGCGGCGGCCAAGATGTCGTCCCGGAATTATTCA
JMSF024G18-           AGCCGTCCGATGCCGGCCAACTTGACGGCGGCGGCCAAGATGTCGTCCCGGAATTATTCA
                      ____________________________________________________________
consensus             AGCCGTCCGATGCCGGCCAACTTGACGGCGGCGGCCAAGATGTCGTCCCGGAATTATTCA
 
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rJMSF024G18+          ACGGTCTTGATTTGAGGGTGATGGAGATGGTGGACATGGAAATAATGGAACCTTCTTTCC
JMSF024G18-           ACGGTCTTGATTTGAGGGTGATGGAGATGGTGGACATGGAAATAATGGAACCTTCTTTCC
                      ____________________________________________________________
consensus             ACGGTCTTGATTTGAGGGTGATGGAGATGGTGGACATGGAAATAATGGAACCTTCTTTCC
 
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rJMSF024G18+          CTGCAGCCCAAAATGATGGCATCAACTACTGGTACCACTGTGATGATCATCATGAGATGG
JMSF024G18-           CTGCAGCCCAAAATGATGGCATCAACTACTGGTACCACTGTGATGATCATCATGAGATGG
                      ____________________________________________________________
consensus             CTGCAGCCCAAAATGATGGCATCAACTACTGGTACCACTGTGATGATCATCATGAGATGG
 
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rJMSF024G18+          ACGGTGTGGATGAGTATTGTAGTAGGGTTCATTTTGAGGATATTAGTGATTATGGGTTTC
JMSF024G18-           ACGGTGTGGATGAGTATTGTAGTAGGGTTCATTTTGAGGATATTAGTGATTATGGGTTTC
                      ____________________________________________________________
consensus             ACGGTGTGGATGAGTATTGTAGTAGGGTTCATTTTGAGGATATTAGTGATTATGGGTTTC
 
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rJMSF024G18+          TATGGCAAGAAACAAATGCCTCCTCATCTTTAATTTGAGGCAAGGCTAGAATTGTCATT 
JMSF024G18-           TATGGCAAGAAACAAATGCCTCCTCATCTTTAATTTGAGGCAAGGCTAGAATTGTCATTT
                      ____________________________________________________________
consensus             TATGGCAAGAAACAAATGCCTCCTCATCTTTAATTTGAGGCAAGGCTAGAATTGTCATTT
 
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JMSF024G18-           CACTTAGATTATGTTATGTAACCCCAATTGAATATATAACTTCTTATACCAAAAAAAAAA
                      ____________________________________________________________
consensus             CACTTAGATTATGTTATGTAACCCCAATTGAATATATAACTTCTTATACCAAAAAAAAAA