Contig 006527:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024C21Sequence652006527 (2)ref|XP_002518870.1|5e-79conserved hypothetical protein [Ricinus communis] gb|EEF43403.1| conserved hypot745013998 (2)ref|XP_004161469.1|8e-130PREDICTED: ABC transporter F family member 3-like [Cucumis sativus]
JMSF028N01Sequence657006527 (2)ref|XP_002518870.1|1e-81conserved hypothetical protein [Ricinus communis] gb|EEF43403.1| conserved hypot723013998 (2)ref|XP_004161469.1|3e-123PREDICTED: ABC transporter F family member 3-like [Cucumis sativus]

Alignment

This contig is upended


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JMSF028N01+           TCCAGTTCCATTCCGTCCAACTAAACCATAGTGTCTTCCAAAAGAAAGTGTCACAGTTCC
JMSF024C21+                   CATTCCGTCCAACTAAACCATAGTGTCTTCCAAAAGAAAGTGTCACAGTTCC
                      ____________________________________________________________
consensus             TCCAGTTCCATTCCGTCCAACTAAACCATAGTGTCTTCCAAAAGAAAGTGTCACAGTTCC
 
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JMSF028N01+           ATCAACAATAAGATCACGGCCACCAACAGATATATTGAAATTCTCCATATGTATATCCTT
JMSF024C21+           ATCAACAATAAGATCACGGCCACCAACAGATATATTGAAATTCTCCATATGTATATCCTT
                      ____________________________________________________________
consensus             ATCAACAATAAGATCACGGCCACCAACAGATATATTGAAATTCTCCATATGTATATCCTT
 
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JMSF028N01+           GACAGCTGCTCCCTCACCACCATCATGGTTTACACATACAACAGGCATCCCAGCTCTGAC
JMSF024C21+           GACAGCTGCTCCCTCACCACCATCATGGTTTACACATACAACAGGCATCCCAGCTCTGAC
                      ____________________________________________________________
consensus             GACAGCTGCTCCCTCACCACCATCATGGTTTACACATACAACAGGCATCCCAGCTCTGAC
 
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JMSF028N01+           TGCTTCCATCTCTTCTAAATGCTCTTGGTATTGTGCCTCTCTTTGTCGTTCCTCTTTCCT
JMSF024C21+           TGCTTCCATCTCTTCTAAATGCTCTTGGTATTGTGCCTCTCTTTGTCGTTCCTCTTTCCT
                      ____________________________________________________________
consensus             TGCTTCCATCTCTTCTAAATGCTCTTGGTATTGTGCCTCTCTTTGTCGTTCCTCTTTCCT
 
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JMSF028N01+           CTTCCTCCTTTCTATCTTAATTTTGTCACGTTCAGTCAACAGAGGGCCATCAACTGGTTC
JMSF024C21+           CTTCCTCCTTTCTATCTTAATTTTGTCACGTTCAGTCAACAGAGGGCCATCAACTGGTTC
                      ____________________________________________________________
consensus             CTTCCTCCTTTCTATCTTAATTTTGTCACGTTCAGTCAACAGAGGGCCATCAACTGGTTC
 
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JMSF028N01+           AGGCTTCTTTTTAGGAGCTTCCTCTTCGTCCATCCCATCAAACATTCTCAATGGTGCTTT
JMSF024C21+           AGGCTTCTTTTTAGGAGCTTCCTCTTCGTCCATCCCATCAAACATTCTCAATGGTGCTTT
                      ____________________________________________________________
consensus             AGGCTTCTTTTTAGGAGCTTCCTCTTCGTCCATCCCATCAAACATTCTCAATGGTGCTTT
 
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JMSF028N01+           TAAACTTCTTACAGCTGGTTTTGGCTTCACCAATCCATGCTTCTCCAGTTTCTCAGACAA
JMSF024C21+           TAAACTTCTTACAGCTGGTTTTGGCTTCACCAATCCATGCTTCTCCAGTTTCTCAGACAA
                      ____________________________________________________________
consensus             TAAACTTCTTACAGCTGGTTTTGGCTTCACCAATCCATGCTTCTCCAGTTTCTCAGACAA
 
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JMSF028N01+           TTTGCTACAGACCGTGCGACATTCGGAGTAGTCGCCGACGCAATCAGAATCGACGAGGAG
JMSF024C21+           TTTGCTACAGACCGTGCGACATTCGGAGTAGTCGCCGACGCAATCAGAATCGACGAGGAG
                      ____________________________________________________________
consensus             TTTGCTACAGACCGTGCGACATTCGGAGTAGTCGCCGACGCAATCAGAATCGACGAGGAG
 
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JMSF028N01+           ATCGCCGATGGCTTCAAATGCACCATCTCCATCGAGACCGAAGTCGAAATCTTCATCAGC
JMSF024C21+           ATCGCCGATGGCTTCAAATGCACCATCTCCATCGAGACCGAAGTCGAAATCTTCATCAGC
                      ____________________________________________________________
consensus             ATCGCCGATGGCTTCAAATGCACCATCTCCATCGAGACCGAAGTCGAAATCTTCATCAGC
 
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JMSF028N01+           GAGCACATTGATGATGTAGTCAACGATTGGCTCGTCCACGTCCTGCAGCCGCCGCCCAAG
JMSF024C21+           GAGCACATTGATGATGTAGTCAACGATTGGCTCGTCCACGTCCTGCAGCCGCCGCCCAAG
                      ____________________________________________________________
consensus             GAGCACATTGATGATGTAGTCAACGATTGGCTCGTCCACGTCCTGCAGCCGCCGCCCAAG
 
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JMSF028N01+           GATTTCATGCACGACAGAACTAGTCACCTCAGTCATCTTCGCAGTCGAGGGTTTTC    
JMSF024C21+           GATTTCATGCACGACAGAACTAGTCACCTCAGTCATCTTCGCAGTCGAGGGTTTTCAGCC
                      ____________________________________________________________
consensus             GATTTCATGCACGACAGAACTAGTCACCTCAGTCATCTTCGCAGTCGAGGGTTTTCAGCC