Contig 006525:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF041N01-           TTTTTTTTTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXXAATCCATAATAATGCATGAT
                      ____________________________________________________________
consensus              TTTTTTTTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNAATCCATAATAATGCATGAT
 
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rJMFF041N01-          ATGATGCATTGATGAGTCCAATGAATTGAAGTAGGAATGTGTGTCAATGTCATTCACACA
rJMFF021F17-            GATGCATTGATGAGTCCAATGAATTGAAGTAGGAATGTGTGTCAATGTCATTCACACA
rJMFF032P02-            GATGCATTGATGAGTCCAATGAATTGAAGTAGGAATGTGTGTCAATGTCATTCACACA
rJMSF024A24-                                       AGTAGGAATGTGTGTCAATGTCATTCACACA
rJMFF023N10-            GATGCATTGATGAGTCCAATGAATTGAAGTAGGAATGTGTGTCAATGTCATTCACACA
rJMSF039B19-                                         TAGGAATGTGTGTCAATGTCATTCACACA
                      ____________________________________________________________
consensus             ATGATGCATTGATGAGTCCAATGAATTGAAGTAGGAATGTGTGTCAATGTCATTCACACA
 
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rJMFF041N01-          CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
rJMFF021F17-          CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
rJMFF032P02-          CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
rJMSF024A24-          CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
rJMFF023N10-          CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
rJMSF039B19-          CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
                      ____________________________________________________________
consensus             CTTCAACTTCTTGAGGGCAAAGTCTCAATAAACTACTCAATGGCGACTTAAAAGCAGTAT
 
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rJMFF041N01-          TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
rJMFF021F17-          TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
rJMFF032P02-          TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
rJMSF024A24-          TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
rJMFF023N10-          TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
rJMSF039B19-          TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
                      ____________________________________________________________
consensus             TGTAGGTGCTTAGCACATTCTGCAATGACCTTATGGAAAAAAAGAGTTCACAACCTTTAC
 
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rJMFF041N01-          GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
rJMFF021F17-          GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
rJMFF032P02-          GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
rJMSF024A24-          GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
rJMFF023N10-          GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
rJMSF039B19-          GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
                      ____________________________________________________________
consensus             GTGCATATCCAGATCGCAATCATCACTATAAGCTTTAAAGGTTGCAAGAGTAGCATCGGC
 
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rJMFF041N01-          CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
rJMFF021F17-          CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
rJMFF032P02-          CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
rJMSF024A24-          CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
rJMFF023N10-          CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
rJMSF039B19-          CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
                      ____________________________________________________________
consensus             CTTCTTTTCCGCATGAAATATAAAAATGCCTCCAACGATACAACGTCTCGCCATCTGTTA
 
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rJMFF041N01-          TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
rJMFF021F17-          TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
rJMFF032P02-          TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
rJMSF024A24-          TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
rJMFF023N10-          TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
rJMSF039B19-          TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
                      ____________________________________________________________
consensus             TCTCCACAAACTCATAAGCTTCTCCTGGATGGAGCTCCTCATAGTAGGTGAGGGCAGATT
 
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rJMFF041N01-          TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
rJMFF021F17-          TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
rJMFF032P02-          TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
rJMSF024A24-          TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
rJMFF023N10-          TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
rJMSF039B19-          TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
                      ____________________________________________________________
consensus             TGCAGAATTCAACAATTTCATCTTTCTGGAGCTCTCTACGTTTTAGTTCGTAAGTTAGGC
 
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rJMFF041N01-          TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
rJMFF021F17-          TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
rJMFF032P02-          TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
rJMSF024A24-          TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
rJMFF023N10-          TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
rJMSF039B19-          TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
JMFF032P02+                                       ATTTTCATCCATTAGCTCCACCTCATCATCTT
JMSF039B19+                                         TTTCATCCATTAGCTCCACCTCATCATCTT
JMFF021F17+                                                                      T
JMFF041N01+            AGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
JMSF024A24+                                           TCATCCATNAGCTCCACCTCATCATCTT
                      ____________________________________________________________
consensus             TAGTCTCCATGCTCACCTTTTCCTTAATATTTTCATCCATTAGCTCCACCTCATCATCTT
 
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rJMFF041N01-          TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
rJMFF021F17-          TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
rJMFF032P02-          TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
rJMSF024A24-          TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
rJMFF023N10-          TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
rJMSF039B19-          TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
JMFF032P02+           TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
JMSF039B19+           TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
JMFF021F17+           TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
JMFF041N01+           TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
JMSF024A24+           TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
                      ____________________________________________________________
consensus             TCGGTAAGACACATTGGTATACACTTAATTTTTCATGTGTATCAAAACTAAAACTACGGG
 
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rJMFF041N01-          CATCCACCAGAAAATTTCGTATAG                                    
rJMFF021F17-          CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
rJMFF032P02-          CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
rJMSF024A24-          CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
rJMFF023N10-          CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
rJMSF039B19-          CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
JMFF032P02+           CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
JMSF039B19+           CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
JMFF023N10+                                                  TTTTGCCATAAAATTGAAGGT
JMFF021F17+           CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
JMFF041N01+           CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
JMSF024A24+           CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
                      ____________________________________________________________
consensus             CATCCACCAGAAAATTTCGTATAGAATTGCCATCTGCCCTTTTGCCATAAAATTGAAGGT
 
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rJMFF021F17-          GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
rJMFF032P02-          GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
rJMSF024A24-          GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
rJMFF023N10-          GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
rJMSF039B19-          GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
JMFF032P02+           GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
JMSF039B19+           GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
JMFF023N10+           GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
JMFF021F17+           GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
JMFF041N01+           GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
JMSF024A24+           GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
                      ____________________________________________________________
consensus             GATAACTATTGCGAGCAGAACAACCATGGTTCGCCTGGTAAGCCTCATGCACGCTCTTAA
 
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rJMFF021F17-          ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACA                    
rJMFF032P02-          ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
rJMSF024A24-          ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
rJMFF023N10-          ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
rJMSF039B19-          ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
JMFF032P02+           ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
JMSF039B19+           ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
JMFF023N10+           ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
JMFF021F17+           ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
JMFF041N01+           ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
JMSF024A24+           ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
                      ____________________________________________________________
consensus             ACTTCCAACACTCTCCTGGATTTTCTTTCTCATAAAGACAAAGAGCAAAGTCGGCCAGTT
 
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rJMFF032P02-          CCTCTGCTTCTC                                                
rJMSF024A24-          CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
rJMFF023N10-          CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
rJMSF039B19-          CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
JMFF032P02+           CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
JMSF039B19+           CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
JMFF023N10+           CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
JMFF021F17+           CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
JMFF041N01+           CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
JMSF024A24+           CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
                      ____________________________________________________________
consensus             CCTCTGCTTCTCCATTTACCAGAGGGCGAGCTATCCACTCACAACCAAAGCCTTCATCAT
 
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rJMSF024A24-          CACTAGTTTCGTCTT                                             
rJMFF023N10-          CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATC                        
rJMSF039B19-          CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCC        
JMFF032P02+           CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
JMSF039B19+           CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
JMFF023N10+           CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
JMFF021F17+           CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
JMFF041N01+           CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
JMSF024A24+           CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
                      ____________________________________________________________
consensus             CACTAGTTTCGTCTTCACTAGTTTCGTCATCAAATCCGGTAGTTGTCTCCCCTCGTTCAG
 
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JMFF032P02+           GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
JMSF039B19+           GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
JMFF023N10+           GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
JMFF021F17+           GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
JMFF041N01+           GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
JMSF024A24+           GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
                      ____________________________________________________________
consensus             GGGACATCGAAGTGTCTTTTGTCTCCGCCGCCTCAACTTTGGTTAGATACGACCAAAACA
 
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JMFF032P02+           TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
JMSF039B19+           TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
JMFF023N10+           TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
JMFF021F17+           TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
JMFF041N01+           TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
JMSF024A24+           TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
                      ____________________________________________________________
consensus             TTCCAAATTTATAACCAGAGTCAGCAGTAGATTCTTCGTGAAATCCGGCACCCGTCTCCC
 
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JMFF032P02+           GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
JMSF039B19+           GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
JMFF023N10+           GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
JMFF021F17+           GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
JMFF041N01+           GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
JMSF024A24+           GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
                      ____________________________________________________________
consensus             GTCGTTTAGCGTACGTCTCCGCCGCCTCATCTTTATCTCCGTCATCCAGTTTCCGTTTTG
 
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JMFF032P02+           GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACAT   
JMSF039B19+           GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACA    
JMFF023N10+           GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACAT   
JMFF021F17+           GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACAT   
JMFF041N01+           GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACAT   
JMSF024A24+           GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACATACC
                      ____________________________________________________________
consensus             GTGACCAGATTCCGGCCATGAGTATTCCACGGAGCAGACGAAAGGTTTTACTAACATACC